Literature DB >> 35815673

Issues in the automated classification of multilead ecgs using heterogeneous labels and populations.

Matthew A Reyna1, Nadi Sadr1, Erick A Perez Alday1, Annie Gu1, Amit J Shah2,3, Chad Robichaux1, Ali Bahrami Rad1, Andoni Elola1,4, Salman Seyedi1, Sardar Ansari5, Hamid Ghanbari6, Qiao Li1, Ashish Sharma1, Gari D Clifford1,7.   

Abstract

Objective.The standard twelve-lead electrocardiogram (ECG) is a widely used tool for monitoring cardiac function and diagnosing cardiac disorders. The development of smaller, lower-cost, and easier-to-use ECG devices may improve access to cardiac care in lower-resource environments, but the diagnostic potential of these devices is unclear. This work explores these issues through a public competition: the 2021 PhysioNet Challenge. In addition, we explore the potential for performance boosting through a meta-learning approach.Approach.We sourced 131,149 twelve-lead ECG recordings from ten international sources. We posted 88,253 annotated recordings as public training data and withheld the remaining recordings as hidden validation and test data. We challenged teams to submit containerized, open-source algorithms for diagnosing cardiac abnormalities using various ECG lead combinations, including the code for training their algorithms. We designed and scored the algorithms using an evaluation metric that captures the risks of different misdiagnoses for 30 conditions. After the Challenge, we implemented a semi-consensus voting model on all working algorithms.Main results.A total of 68 teams submitted 1,056 algorithms during the Challenge, providing a variety of automated approaches from both academia and industry. The performance differences across the different lead combinations were smaller than the performance differences across the different test databases, showing that generalizability posed a larger challenge to the algorithms than the choice of ECG leads. A voting model improved performance by 3.5%.Significance.The use of different ECG lead combinations allowed us to assess the diagnostic potential of reduced-lead ECG recordings, and the use of different data sources allowed us to assess the generalizability of the algorithms to diverse institutions and populations. The submission of working, open-source code for both training and testing and the use of a novel evaluation metric improved the reproducibility, generalizability, and applicability of the research conducted during the Challenge.
© 2022 Institute of Physics and Engineering in Medicine.

Entities:  

Keywords:  algorithms; classification; competition; database; electrocardiogram; open-source

Mesh:

Year:  2022        PMID: 35815673      PMCID: PMC9469795          DOI: 10.1088/1361-6579/ac79fd

Source DB:  PubMed          Journal:  Physiol Meas        ISSN: 0967-3334            Impact factor:   2.688


  38 in total

1.  PhysioBank, PhysioToolkit, and PhysioNet: components of a new research resource for complex physiologic signals.

Authors:  A L Goldberger; L A Amaral; L Glass; J M Hausdorff; P C Ivanov; R G Mark; J E Mietus; G B Moody; C K Peng; H E Stanley
Journal:  Circulation       Date:  2000-06-13       Impact factor: 29.690

2.  The absolute voltage and the lead vector of Wilson's central terminal.

Authors:  N Miyamoto; Y Shimizu; G Nishiyama; S Mashima; Y Okamoto
Journal:  Jpn Heart J       Date:  1996-03

3.  An artificial vector model for generating abnormal electrocardiographic rhythms.

Authors:  Gari D Clifford; Shamim Nemati; Reza Sameni
Journal:  Physiol Meas       Date:  2010-03-22       Impact factor: 2.833

4.  A study on several critical problems on arrhythmia detection using varying-dimensional electrocardiography.

Authors:  Jingsu Kang; Hao Wen
Journal:  Physiol Meas       Date:  2022-06-28       Impact factor: 2.833

5.  Classification of ECG using ensemble of residual CNNs with or without attention mechanism.

Authors:  Petr Nejedly; Adam Ivora; Ivo Viscor; Zuzana Koscova; Radovan Smisek; Pavel Jurak; Filip Plesinger
Journal:  Physiol Meas       Date:  2022-04-28       Impact factor: 2.833

6.  ECG reading differences demonstrated on two databases.

Authors:  Richard E Gregg; Ting Yang; Stephen W Smith; Saeed Babaeizadeh
Journal:  J Electrocardiol       Date:  2021-09-10       Impact factor: 1.438

7.  Automated diagnosis of arrhythmia using combination of CNN and LSTM techniques with variable length heart beats.

Authors:  Shu Lih Oh; Eddie Y K Ng; Ru San Tan; U Rajendra Acharya
Journal:  Comput Biol Med       Date:  2018-06-05       Impact factor: 4.589

8.  AF Classification from a Short Single Lead ECG Recording: the PhysioNet/Computing in Cardiology Challenge 2017.

Authors:  Gari D Clifford; Chengyu Liu; Benjamin Moody; Li-Wei H Lehman; Ikaro Silva; Qiao Li; A E Johnson; Roger G Mark
Journal:  Comput Cardiol (2010)       Date:  2018-04-05

9.  PTB-XL, a large publicly available electrocardiography dataset.

Authors:  Patrick Wagner; Nils Strodthoff; Ralf-Dieter Bousseljot; Dieter Kreiseler; Fatima I Lunze; Wojciech Samek; Tobias Schaeffter
Journal:  Sci Data       Date:  2020-05-25       Impact factor: 6.444

10.  Classification of 12-lead ECGs: the PhysioNet/Computing in Cardiology Challenge 2020.

Authors:  Erick A Perez Alday; Annie Gu; Amit J Shah; Chad Robichaux; An-Kwok Ian Wong; Chengyu Liu; Feifei Liu; Ali Bahrami Rad; Andoni Elola; Salman Seyedi; Qiao Li; Ashish Sharma; Gari D Clifford; Matthew A Reyna
Journal:  Physiol Meas       Date:  2021-01-01       Impact factor: 2.833

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