| Literature DB >> 35814362 |
Hao-Yu Liang1, Shi-Feng Yang2, Hong-Mei Zou3, Feng Hou4, Li-Sha Duan5, Chen-Cui Huang6, Jing-Xu Xu6, Shun-Li Liu1, Da-Peng Hao1, He-Xiang Wang1.
Abstract
Objectives: To build and evaluate a deep learning radiomics nomogram (DLRN) for preoperative prediction of lung metastasis (LM) status in patients with soft tissue sarcoma (STS).Entities:
Keywords: deep learning; lung metastasis; magnetic resonance imaging; radiomics nomogram; soft tissue sarcomas
Year: 2022 PMID: 35814362 PMCID: PMC9265249 DOI: 10.3389/fonc.2022.897676
Source DB: PubMed Journal: Front Oncol ISSN: 2234-943X Impact factor: 5.738
Figure 1Schematic of the radiomics analysis.
Patient’s Clinical information and MRI semantic features between non-metastasis and metastasis group in the training and external validation set.
| Training set (N = 116) | External validation set (N = 126) | ||||||
|---|---|---|---|---|---|---|---|
| Non-metastasis(N = 96) | Metastasis(N = 20) | P | Non-metastasis (N = 107) | Metastasis (N = 19) | P | ||
| Age (years) (mean ± SD) | 51.31 ± 18.851 | 48.10 ± 17.741 | 0.485 | 51.51 ± 17.159 | 49.74 ± 20.448 | 0.687 | |
| Gender | Male | 62 | 12 | 0.698 | 63 | 15 | 0.097 |
| Female | 34 | 8 | 44 | 4 | |||
| T-stage | 1 | 33 | 3 | 0.002 | 28 | 3 | 0.022 |
| 2 | 44 | 7 | 55 | 6 | |||
| 3 | 11 | 2 | 17 | 5 | |||
| 4 | 8 | 8 | 7 | 5 | |||
| N-stage | 0 | 86 | 15 | 0.161 | 98 | 14 | 0.022 |
| 1 | 10 | 5 | 9 | 5 | |||
| MRI Semantic Features | |||||||
| Number | Solitary | 62 | 16 | 0.181 | 76 | 15 | 0.478 |
| Multiple | 34 | 4 | 31 | 4 | |||
| Depth | Deep | 37 | 10 | 0.344 | 56 | 55 | 0.036 |
| Superficial | 59 | 10 | 51 | 14 | |||
| Heterogeneous SI at T1WI | <50% | 62 | 8 | 0.041 | 53 | 9 | 0.862 |
| ≥50% | 34 | 12 | 54 | 10 | |||
| Heterogeneous SI at T2WI | <50% | 50 | 6 | 0.072 | 48 | 7 | 0.516 |
| ≥50% | 46 | 14 | 59 | 12 | |||
| Tumor volume of necrosis MRI signal | 0 | 20 | 5 | 0.590 | 22 | 1 | 0.265 |
| 1%–50% | 55 | 9 | 60 | 12 | |||
| >50% of tumor volume | 21 | 6 | 25 | 6 | |||
| Peritumoral edema | No | 20 | 5 | 0.178 | 28 | 4 | 0.045 |
| Limited | 62 | 9 | 71 | 10 | |||
| Extensive | 14 | 6 | 8 | 5 | |||
| Location | Limb | 93 | 19 | 0.648 | 61 | 9 | 0.202 |
| Trunk wall | 2 | 1 | 16 | 4 | |||
| Head and neck | 0 | 0 | 2 | 2 | |||
| Internal trunk | 1 | 0 | 28 | 4 | |||
SD, standard deviation; Calculated from student t-test or Mann–Whitney U test for ordinal variables and chi-square test or Fisher exact test for categorical variables, where appropriate.
Results of univariate and multivariate logistic regression analysis in soft-tissue sarcoma patients.
| Univariate Logistic Analysis | Multivariate Logistic Analysis | |||
|---|---|---|---|---|
| OR (95%CI) | P | OR (95%CI) | P | |
| Age | 0.991 (0.966-1.017) | 0.482 | ||
| Gender | 0.823 (0.306-2.208) | 0.698 | ||
| 2.201 (1.351-3.583) | 0.002 | 2.943 (1.266-6.838) | 0.012 | |
| 0.349 (0.104-1.165) | 0.087 | 0.153 (0.023-1.007) | 0.051 | |
| Number | 0.456 (0.141-1.473) | 0.189 | ||
| Depth | 0.627 (0.238-1.651) | 0.345 | ||
| 0.366 (0.136-0.981) | 0.046 | 1.211 (0.126-11.677) | 0.869 | |
| 0.394 (0.140-1.112) | 0.079 | 1.284 (0.131-12.577) | 0.830 | |
| Tumor volume with MRI signal compatible with necrosis | 1.092 (0.531-2.246) | 0.810 | ||
| Peritumoral edema | 1.340 (0.614-2.922) | 0.462 | ||
| Location | 0.979 (0.209-4.582) | 0.979 | ||
OR, odds ratio; CI, confidence interval.
Results of clinical model, radiomics model and DLRN predictive performance.
| Set | Model | AUC (95%CI) | ACC | ER | SEN | SPE | PPV | NPV | P |
|---|---|---|---|---|---|---|---|---|---|
| Training | DLRN | 0.936 (0.874-0.999) | 0.914 | 0.086 | 0.650 | 0.969 | 0.813 | 0.930 | Reference |
| Radiomics model | 0.914 (0.876-0.953) | 0.755 | 0.245 | 0.463 | 1.000 | 1.000 | 0.691 | 0.551 | |
| Clinical model | 0.696 (0.564-0.827) | 0.828 | 0.172 | 0.000 | 1.000 | NA | 0.828 | <0.001 | |
| External validation | DLRN | 0.833 (0.732-0.933) | 0.897 | 0.103 | 0.474 | 0.972 | 0.750 | 0.912 | Reference |
| Radiomics model | 0.799 (0.675-0.922) | 0.881 | 0.119 | 0.263 | 0.991 | 0.833 | 0.883 | 0.394 | |
| Clinical model | 0.664 (0.523-0.805) | 0.849 | 0.151 | 0.000 | 1.000 | NA | 0.849 | 0.034 |
CI, confidence interval; ACC, accuracy; ER, error rate; SEN, sensitivity; SPE, specificity; PPV, positive predictive value; NPV, negative predictive value; NA, not available.
Figure 2Selection of MRI hand-crafted radiomics and deep learning features. (A) The six radiomics features with non-zero coefficients in the HD-Combined model. (B) The coefficients plot (as ln λ). (C) Selection of the tuning parameter (λ). λ=0.057(ln λ=-2.86) was applied.
Figure 3(A) Deep learning radiomic nomogram (DLRN). (B) Calibration curve of the DLRN on the training set. (C) Calibration curve of the DLRN on the external validation set. (D) Decision curve analysis of the DLRN. (E, F) Kaplan-Meier survival analysis of the DLRN model on the training and external validation sets.