| Literature DB >> 35812313 |
Tessa Schillemans1, Vinicius Tragante2, Buamina Maitusong1, Bruna Gigante3,4, Sharon Cresci5, Federica Laguzzi1, Max Vikström1, Mark Richards6,7, Anna Pilbrow6, Vicky Cameron6, Luisa Foco8, Robert N Doughty9, Pekka Kuukasjärvi10, Hooman Allayee11,12, Jaana A Hartiala12, W H Wilson Tang13,14, Leo-Pekka Lyytikäinen15,16, Kjell Nikus17,18, Jari O Laurikka10,19, Sundararajan Srinivasan20, Ify R Mordi21, Stella Trompet22,23, Adriaan Kraaijeveld2, Jessica van Setten2, Crystel M Gijsberts24,25, Anke H Maitland-van der Zee26, Christoph H Saely27,28,29, Yan Gong30, Julie A Johnson30,31, Rhonda M Cooper-DeHoff30,31, Carl J Pepine31, Gavino Casu32, Andreas Leiherer27,28, Heinz Drexel27,28,33, Benjamin D Horne34,35, Sander W van der Laan36, Nicola Marziliano37,38, Stanley L Hazen13,14, Juha Sinisalo39, Mika Kähönen40,41, Terho Lehtimäki15,40, Chim C Lang20, Ralph Burkhardt41,42, Markus Scholz43, J Wouter Jukema44,45, Niclas Eriksson46, Axel Åkerblom46,47, Stefan James46,47, Claes Held46,47, Emil Hagström47, John A Spertus48, Ale Algra49, Ulf de Faire1, Agneta Åkesson1, Folkert W Asselbergs2,50, Riyaz S Patel50,51, Karin Leander1.
Abstract
Background: The knowledge of factors influencing disease progression in patients with established coronary heart disease (CHD) is still relatively limited. One potential pathway is related to peroxisome proliferator-activated receptor gamma coactivator-1 alpha (PPARGC1A), a transcription factor linked to energy metabolism which may play a role in the heart function. Thus, its associations with subsequent CHD events remain unclear. We aimed to investigate the effect of three different SNPs in the PPARGC1A gene on the risk of subsequent CHD in a population with established CHD.Entities:
Keywords: PPARGC1A; SNPs; cohort studies; coronary heart disease; meta-analysis; polymorphisms
Year: 2022 PMID: 35812313 PMCID: PMC9260705 DOI: 10.3389/fphys.2022.909870
Source DB: PubMed Journal: Front Physiol ISSN: 1664-042X Impact factor: 4.755
FIGURE 1Flow chart of study selection criteria and available SNPs for the primary outcome. Correlation between lead and proxy SNP is indicated by r (source: LDproxy Tool; ldlink.nci.nih.gov in European).
Characteristics of studies included in the meta-analysis.
| Cohort | Study (country) | Design, CHD type | Year | Mean follow-up time, years (SD) | N recruited with CHD | Sex, % male | Mean age, years (SD) | European ancestry (%) | PubMed ID |
|---|---|---|---|---|---|---|---|---|---|
| AGNES | Arrhythmia Genetics in the Netherlands | Cohort, ACS | 2001–2005 | 6.73 (4.75) | 1,459 | 79.2 | 57.8 (10.7) | 100 | 20622880 |
| ANGNES | Angiography and Genes Study (Finland) | Cohort, mixed | 2002–2005 | 8.20 (4.47) | 588 | 65.5 | 64.1 (9.6) | 100 | 21640993 |
| CDCS | Coronary Disease Cohort Study (New Zealand) | Cohort, ACS | 2002–2009 | 5.21 (2.15) | 2,139 | 71.3 | 67.4 (12.0) | 91.4 | 20400779 |
| CTMM | CTMM Circulating Cells (Netherlands) | Cohort, mixed | 2009–2011 | 0.97 (0.37) | 713 | 69 | 62.6 (10.1) | 96.5 | 23975238 |
| FINCAVAS | Finnish Cardiovascular Study | Cohort, mixed | 2001–2008 | 8.57 (3.99) | 1,671 | 69.4 | 60.9 (11.0) | 100 | 16515696 |
| GoDARTSprevalent | Genetics of Diabetes Audit and Research in Tayside Scotland (I) | Population, CAD | 2004–2012 | 3.47 (2.95) | 1,261 | 61.1 | 71.3 (10.9) | 99.8 | 29025058 |
| GoDARTSincident | Genetics of Diabetes Audit and Research in Tayside Scotland (P) | Population, CAD | 2004–2012 | 6.48 (3.06) | 2,514 | 65.9 | 69.1 (9.4) | 99.7 | 29025058 |
| IATVB | Italian Atherosclerosis, Thrombosis and Vascular Biology Group | Cohort, ACS | 1997–2006 | 10.47 (4.45) | 1,741 | 90.8 | 40.0 (4.4) | 100 | 21757122 |
| LIFE-Heart | Leipzig (LIFE) Heart Study (Germany) | Cohort, mixed | 2006–2014 | 1.62 (2.03) | 5,564 | 77.2 | 63.9 (11.1) | 100 | 32747942 |
| LURIC | The Ludwigshafen Risk and Cardiovascular Health Study (Germany) | Cohort, mixed | 1997–2000 | 8.58 (3.18) | 2,320 | 76.6 | 63.8 (9.9) | 100 | 11258203 |
| OHGS | Ottawa Heart Genomics Study (Canada) | Cohort, mixed | 2010–2013 | 1.77 (0.27) | 546 | 73.8 | 65.6 (11.1) | 100 | NA |
| PLATO | The Study of Platelet Inhibition and Patient Outcomes (International) | RCT, ACS | 2006–2008 | 0.86 (0.24) | 18,624 | 69.5 | 62.6 (11.0) | 98.3 | 19332184 |
| PMI | Post Myocardial Infarction Study (New Zealand) | Cohort, ACS | 1994–2001 | 8.56 (3.58) | 1,057 | 78 | 62.8 (10.6) | 91.1 | 12771003 |
| PROSPER | Prospective Study of Pravastatin in the Elderly at Risk (Netherlands) | RCT, CAD | 1997–1999 | 3.15 (0.71) | 893 | 70.3 | 75.4 (3.4) | 100 | 10569329 |
| SHEEP | Stockholm Heart Epidemiology Program (Sweden) | Cohort, ACS | 1992–1995 | 14.87 (5.91) | 1,150 | 70.7 | 59.3 (7.2) | 100 | 17667644 |
| SMART | Second Manifestations of Arterial Disease (Netherlands) | Cohort, mixed | 1999–2010 | 6.77 (3.86) | 3,057 | 81.7 | 60.5 (9.3) | 98.2 | 10468526 |
| STABILITY | Stabilization of Atherosclerotic Plaque by Initiation of Darapladib Therapy trial (International) | RCT, CAD | 2008–2010 | 3.60 (0.57) | 10,786 | 82 | 64.7 (9.1) | 86.1 | 24678955 |
| UCP | Utrecht Cardiovascular Pharmacogenetic Study (Netherlands) | Cohort, mixed | 1985–2010 | 8.00 (4.16) | 1,508 | 75.4 | 64.1 (10.0) | 100 | 25652526 |
| UKB | United Kingdom Biobank (United Kingdom) | Population, CAD | 2006–2010 | 6.39 (1.72) | 12,045 | 80.6 | 69.9 (6.1) | 94.2 | 1001779 |
| VIVIT | Vorarlberg Institute for Vascular Investigation and Treatment Study (Austria) | Cohort, CAD | 1999–2008 | 7.43 (2.91) | 1,447 | 72 | 64.5 (10.5) | 99.8 | 24265174 |
| GENEBANK | Cleveland Clinic Genebank Study (United States) | Cohort, mixed | 2001–2007 | 3.00 (0.00) | 2,345 | 74.3 | 61.5 (11.1) | 100 | 21475195 |
| INVEST | International Verapamil SR Trandolopril Study Genetic Substudy INVEST-GENES (United States/International) | RCT, CAD | 1997–2003 | 2.83 (0.82) | 5,979 | 44 | 66.1 (9.7) | 38.0 | 21372283, 17700361 |
| UCORBIO | Utrecht Coronary Biobank (Netherlands) | Cohort, mixed | 2011–2014 | 1.6 (0.9) | 1,493 | 75.6 | 65.4 (10.3) | 72.4 | NA |
| Additional studies not included in primary outcome analysis but included in secondary outcome analyses of all-cause mortality. | |||||||||
| COROGENE | Corogene Study (Finland) | Cohort, ACS | 2006–2008 | 7.7 (0.5) | 1,489 | 70.9 | 64.7 (11.9) | 100 | 21642350 |
| MDCS | Malmo Diet and Cancer Study (Sweden) | Population, CAD | 1991–1996 | 8.3 (8.0) | 4,546 | 60.2 | 58.0 (7.6) | 100 | 19936945 |
| TRIUMPH | Translational Research Investigating Underlying Disparities in Acute Myocardial Infarction Patient’s Health Status (United States) | Cohort, ACS | 2005–2008 | 0.97 (0.15) | 2,062 | 72.2 | 59.8 (12.1) | 100 | 21772003 |
| WTCCC (BHF) | WTCCC CAD Study (United Kingdom) | Cohort, mixed | 1998–2003 | 10.05 (2.81) | 1,926 | 79.3 | 60.0 (8.1) | 100 | 16380912, 17634449 |
More detailed information is available in Reference number 28: Patel RS,et al. (2019) Circ Genom Precic Med.
CHD, coronary heart disease; ACS, acute coronary syndrome; CAD, coronary artery disease; RCT, randomized controlled trial; SD, standard deviation.
Minor allele frequencies (MAFs) and p-values for Hardy–Weinberg equilibrium (PHWE) for the three SNPs in the studies included in the meta-analysis.
| Cohort | MAF rs8192678 (G482S) | PHWE rs8192678 (G482S) | MAF rs7672915 (intron 2) | PHWE rs7672915 (intron 2) | MAF rs3755863 (T528T) | PHWE rs3755863 (T528T) |
|---|---|---|---|---|---|---|
| AGNES | 0.331 | 0.106 | 0.404 | 0.842 | 0.395 | 0.550 |
| ANGNES | 0.316 | 0.075 | 0.385 | 0.265 | 0.343 | 0.280 |
| CDCS | 0.345 | 0.880 | 0.465 | 0.254 | 0.402 | 0.741 |
| CTMM | 0.345 | 0.720 | 0.430 | 0.242 | 0.402 | 0.237 |
| FINCAVAS | 0.320 | 0.261 | 0.355 | 0.0006 | 0.350 | 0.162 |
| GoDARTSprevalent | 0.348 | 0.784 | 0.466 | 0.485 | 0.409 | 0.572 |
| GoDARTSincident | 0.325 | 0.523 | 0.444 | 0.064 | 0.382 | 0.416 |
| IATVB | 0.360 | 0.909 | - | - | 0.441 | 0.672 |
| LIFE-Heart | 0.323 | 0.135 | 0.432 | 0.950 | 0.367 | 0.109 |
| LURIC | 0.345 | 0.776 | 0.448 | 0.571 | 0.395 | 0.654 |
| OHGS | 0.287 | 0.806 | 0.424 | 0.215 | 0.355 | 0.097 |
| PLATO | 0.325 | 0.698 | 0.451 | 0.374 | 0.374 | 0.701 |
| PMI | 0.348 | 0.015 | 0.435 | 0.093 | 0.404 | 0.032 |
| PROSPER | 0.338 | 0.582 | 0.442 | 0.510 | 0.399 | 0.420 |
| SHEEP | 0.339 | 0.946 | 0.399 | 0.804 | 0.391 | 0.416 |
| SMART | 0.339 | 0.965 | - | - | - | - |
| STABILITY | 0.334 | 0.778 | 0.463 | 0.026 | 0.385 | 0.714 |
| UCP | 0.353 | 0.734 | 0.435 | 0.434 | 0.411 | 1.0 |
| UKB | 0.342 | 0.982 | 0.061 | 0.909 | 0.005 | 0.846 |
| VIVIT | - | - | - | - | 0.477 | 0.270 |
| GENEBANK | 0.348 | 0.716 | 0.423 | 0.472 | 0.4 | 0.931 |
| INVEST | 0.301 | 0.034 | 0.498 | 0.554 | 0.374 | 0.385 |
| UCORBIO | 0.337 | 0.643 | - | - | - | - |
| Additional studies are not included in primary outcome analysis but included in secondary outcome analyses of all-cause mortality. | ||||||
| COROGENE | 0.322 | 0.373 | 0.333 | 0.162 | 0.350 | 0.609 |
| MDCS | 0.342 | 0.325 | 0.379 | 0.536 | 0.392 | 0.769 |
| TRIUMPH | 0.370 | 0.002 | 0.464 | 0.103 | 0.404 | 0.015 |
| WTCCC (BHF) | 0.333 | 0.341 | 0.460 | 1.0 | 0.408 | 1.0 |
Indicates the use of a highly correlated proxy (AGNES, rs9996943; OHGS, rs7683406; IATVB, rs10938963; UCP, rs1873532; and VIVIT, rs12650562).
Studies with p HWE<0.05 were excluded in sensitivity analyses for the primary outcome.
FIGURE 2Meta-analyses of the associations between three SNPs in the PPARGC1A gene and primary outcome (CHD death or myocardial infarction) in participants with baseline CHD within GENIUS-CHD using an additive, fixed-effect model adjusted for age and sex.
FIGURE 3Meta-analyses pooled results of the associations between three SNPs in the PPARGC1A gene and secondary outcomes in participants with baseline CHD within GENIUS-CHD using an additive, fixed-effect model stratified for age and sex (phomogeneity>0.05 for all outcomes). Abbreviations: CHD, coronary heart disease; CVD, cardiovascular disease; MI, myocardial infarction.
FIGURE 4Meta-analyses pooled results of the associations between three SNPs in the PPARGC1A gene and the main outcome (CHD death or myocardial infarction) in participants with baseline CHD within GENIUS-CHD using an additive, fixed-effect model stratified for the baseline CHD subtype (phomogeneity>0.05 for all outcomes).Abbreviations: ACS, Acute Coronary Syndrome; CAD, Coronary Artery Disease; MI, Myocardial Infarction.
FIGURE 5Panel (A): Meta-analyses of the associations between rs8192673 (G482S) in the PPARGC1A gene and the primary outcome (CHD death or myocardial infarction) in participants with baseline CHD within GENIUS-CHD using an additive, fixed-effect model stratified for patient-level characteristics. LV, left ventricular. Panel (B): Meta-analyses of the associations between rs7672915 (intron 2) in the PPARGC1A gene and the primary outcome (CHD death or myocardial infarction) in participants with baseline CHD within GENIUS-CHD using an additive, fixed-effect model stratified for patient-level characteristics. LV, left ventricular. Panel (C): Meta-analyses of the associations between rs3755863 (T528T) in the PPARGC1A gene and the primary outcome (CHD death or myocardial infarction) in participants with baseline CHD within GENIUS-CHD using an additive, fixed-effect model stratified for patient-level characteristics. LV, left ventricular.