Literature DB >> 3580485

Resolvability of fluorescence lifetime distributions using phase fluorometry.

J R Alcala, E Gratton, F G Prendergast.   

Abstract

The analysis of the fluorescence decay using discrete exponential components assumes that a small number of species is present. In the absence of a definite kinetic model or when a large number of species is present, the exponential analysis underestimates the uncertainty of the recovered lifetime values. A different approach to determine the lifetime of a population of molecules is the use of probability density functions and lifetime distributions. Fluorescence decay data from continuous distributions of exponentially decaying components were generated. Different magnitudes of error were added to the data to simulate experimental conditions. The resolvability of the distributional model was studied by fitting the simulated data to one and two exponentials. The maximum width of symmetric distributions (uniform, gaussian, and lorentzian), which cannot be distinguished from single and double exponential fits for statistical errors of 1 and 0.1%, were determined. The width limits are determined by the statistical error of the data. It is also shown that, in the frequency domain, the discrete exponential analysis does not uniformly weights all the components of a distribution. This systematic error is less important when probability and distribution functions are used to recover the decay. Finally, it is shown that real lifetime distributions can be proved using multimodal probability density functions. In the companion paper that follows we propose a physical approach, which provides lifetime distribution functions for the tryptophan decay in proteins. In the third companion paper (Alcala, J.R., E. Gratton, and F.J. Prendergast, 1987, Biophys. J., in press) we use the distribution functions obtained to fit data from the fluorescence decay of single tryptophan proteins.

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Year:  1987        PMID: 3580485      PMCID: PMC1329930          DOI: 10.1016/S0006-3495(87)83383-0

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  3 in total

1.  Fluorescence lifetime distributions in proteins.

Authors:  J R Alcala; E Gratton; F G Prendergast
Journal:  Biophys J       Date:  1987-04       Impact factor: 4.033

2.  Analysis of fluorescence decay kinetics from variable-frequency phase shift and modulation data.

Authors:  J R Lakowicz; G Laczko; H Cherek; E Gratton; M Limkeman
Journal:  Biophys J       Date:  1984-10       Impact factor: 4.033

3.  Dynamics of ligand binding to myoglobin.

Authors:  R H Austin; K W Beeson; L Eisenstein; H Frauenfelder; I C Gunsalus
Journal:  Biochemistry       Date:  1975-12-02       Impact factor: 3.162

  3 in total
  61 in total

1.  Effect of hydrostatic pressure on water penetration and rotational dynamics in phospholipid-cholesterol bilayers.

Authors:  C Bernsdorff; A Wolf; R Winter; E Gratton
Journal:  Biophys J       Date:  1997-03       Impact factor: 4.033

2.  Quantification of allosteric influence of Escherichia coli phosphofructokinase by frequency domain fluorescence.

Authors:  Audrey S Pham; Gregory D Reinhart
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

3.  Conformational substates in azurin.

Authors:  D Ehrenstein; G U Nienhaus
Journal:  Proc Natl Acad Sci U S A       Date:  1992-10-15       Impact factor: 11.205

4.  Pressure and low temperature effects on the fluorescence emission spectra and lifetimes of the photosynthetic components of cyanobacteria.

Authors:  D Foguel; R M Chaloub; J L Silva; A R Crofts; G Weber
Journal:  Biophys J       Date:  1992-12       Impact factor: 4.033

5.  Methodological considerations for global analysis of cellular FLIM/FRET measurements.

Authors:  Nur Aida Adbul Rahim; Serge Pelet; Roger D Kamm; Peter T C So
Journal:  J Biomed Opt       Date:  2012-02       Impact factor: 3.170

6.  Fluorescence lifetime distributions in human superoxide dismutase. Effect of temperature and denaturation.

Authors:  N Rosato; E Gratton; G Mei; A Finazzi-Agrò
Journal:  Biophys J       Date:  1990-10       Impact factor: 4.033

7.  Resolution of multicomponent fluorescence emission using frequency-dependent phase angle and modulation spectra.

Authors:  J R Lakowicz; R Jayaweera; H Szmacinski; W Wiczk
Journal:  Anal Chem       Date:  1990-09-15       Impact factor: 6.986

8.  Dynamic fluorescence in copper proteins. Selected examples.

Authors:  N Rosato; E Gratton; G Mei; I Savini; A Finazzi Agrò
Journal:  Biol Met       Date:  1990

9.  Fluorescence lifetime studies with staphylococcal nuclease and its site-directed mutant. Test of the hypothesis that proline isomerism is the basis for nonexponential decays.

Authors:  M R Eftink; C A Ghiron; R A Kautz; R O Fox
Journal:  Biophys J       Date:  1989-03       Impact factor: 4.033

10.  Conformational dynamics of bovine Cu, Zn superoxide dismutase revealed by time-resolved fluorescence spectroscopy of the single tyrosine residue.

Authors:  S T Ferreira; L Stella; E Gratton
Journal:  Biophys J       Date:  1994-04       Impact factor: 4.033

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