| Literature DB >> 35794345 |
Christoph Schmidt1, Christoph Joppek2, Frederik Trinkmann3,4, Ralf Takors5, Giorgio Cattaneo2, Johannes Port2.
Abstract
Obstructive pulmonary diseases are associated with considerable morbidity. For an early diagnosis of these diseases, inert gas washouts can potentially be used. However, the complex interaction between lung anatomy and gas transport mechanisms complicates data analysis. In order to investigate this interaction, a numerical model, based on the finite difference method, consisting of two lung units connected in parallel, was developed to simulate the tracer gas transport within the human acinus. Firstly, the geometries of the units were varied and the diffusion coefficients (D) were kept constant. Secondly, D was changed and the geometry was kept constant. Furthermore, simple monoexponential growth functions were applied to evaluate the simulated data. In 109 of the 112 analyzed curves, monoexponential function matched simulated data with an accuracy of over 90%, potentially representing a suitable numerical tool to predict transport processes in further model extensions. For total flows greater than 5 × 10-4 ml/s, the exponential growth constants increased linearly with linear increasing flow to an accuracy of over 95%. The slopes of these linear trend lines of 1.23 µl-1 (D = 0.6 cm2/s), 1.69 µl-1 (D = 0.3 cm2/s), and 2.25 µl-1 (D = 0.1 cm2/s) indicated that gases with low D are more sensitive to changes in flows than gases with high D.Entities:
Keywords: Acinar model; Convection; Diffusion; Gas distribution; Single branch-point model
Mesh:
Substances:
Year: 2022 PMID: 35794345 PMCID: PMC9365752 DOI: 10.1007/s11517-022-02608-x
Source DB: PubMed Journal: Med Biol Eng Comput ISSN: 0140-0118 Impact factor: 3.079
Overview of the sections in the “Material and methods” chapter
| Method section | Short description |
|---|---|
| Geometrical assumptions | - The morphometric data derived by Weibel are the geometrical basis for the generations 17–23 (acinus) - For simplification, the diameter and lengths of the Weibel model were averaged through generations 17–23 |
| Creation of a simple bronchial network | - - - |
| Balance of the molar fluxes | - Balancing the inflowing and outflowing molar fluxes for both convection and diffusion for each compartment - Diffusion process based on Fick’s first law |
| Specification of the initial and boundary conditions | - Initial condition: chamber filled with tracer gas - Boundary condition: a semipermeable membrane at the model input prevents tracer gas from flowing out |
| Simulation of the temporal concentration curves | - Model study was divided into three parts: - Part 1: Investigation of the influence of symmetrical volume change and flow rate on gas transport - Part 2: Investigation of the influence of asymmetrical volume change and flow rate on gas transport - Part 3: Investigation of the influence of changes in the diffusion coefficient under asymmetrical conditions |
| Analysis of the simulation data | - The simulated curves were adapted using monoexponential growth functions and the steady state value and growth constant were determined |
Fig. 1a This figure shows a simplified, symmetrically branched network of airways, beginning with one initial airway from generation 17 dividing into 64 bronchioles in generation 23, based on Weibel’s anatomical lung model [34]. This network is divided into three so-called branch units BrU0, BrU1, and BrU2. Three indices describe the position of each airway within this network. The first index is the branch unit, the second is the relative generation within this unit, and the third stands for the airway number within the respective, relative generation. Since BrU1 and BrU2 have a symmetrical structure, each comprised 6 generations. The walls of the airways are surrounded by alveoli (grey areas). b The symmetrically branched structure within each branch unit was merged to form the so-called branch elements BrEi,j. The index i stands for the branch unit; j stands for the respective generation within this unit
Fig. 2Asymmetric lung model consisting of three branch units BrU0, BrU1, and BrU2. The number of branch elements (m1 + 1) and (m2 + 1) within BrU1 and BrU2 depends on the volume flow at the inputs of these units
Important parameters of Weibel’s anatomical lung model [34] (marked with an asterisk) and the flow velocity calculated for each generation based on a volume flow in the trachea of QT = 250 ml/s. Parameters averaged over generations 17 to 23 are indexed with an “M.” The mean volume flow QM results from the mean diameter dM and the mean flow velocity uM as follows:
| Type of airway | Generation | Number of bronchioles (Br) per generation | Number of alveoli (Alv) per generation | Diameter of bronchioles | Length of bronchioles | Flow velocity and volume flow | ||||
|---|---|---|---|---|---|---|---|---|---|---|
| (cm) | (cm) | (cm) | (cm) | (cm/s) | (cm/s) | (cm3/s) | ||||
| Respiratory bronchiole* | 17 | 131,072 | 5 | 0.0543 | 0.0464 | 0.14 | 0.089 | 0.80 | 0.27 | 4.6 × 10−4 |
| 18 | 262,144 | 8 | 0.0504 | 0.12 | 0.50 | |||||
| 19 | 524,288 | 12 | 0.0474 | 0.10 | 0.30 | |||||
| Alveolar duct* | 20 | 1,048,576 | 20 | 0.0451 | 0.08 | 0.10 | ||||
| 21 | 2,097,152 | 20 | 0.0434 | 0.07 | 0.10 | |||||
| 22 | 4,194,304 | 20 | 0.0424 | 0.06 | 0.04 | |||||
| Alveolar sacs* | 23 | 8,388,608 | 17 | 0.0419 | 0.05 | 0.02 | ||||
Fig. 3Molar fluxes and flowing into and out of the compartment k of a locally discretized BrE of length lM and the flux flowing into the surrounding alveoli k′
Fig. 4The branch unit BrU0 is extended by a chamber that has no alveoli and a length of 1/2∙lM. In this chamber, at time t = 0 s, there is the tracer gas whose spatial distribution corresponds to a sinusoidal half-wave (marked in black). There is no tracer gas in the rest of the model at this time. At the entrance, a semipermeable membrane (dotted line) was modelled so that N2 could flow into the model but the tracer gas could not flow out
Parameters used in Parts 1 to 3 of the study. Simulations 1 to 6 were each performed for pure diffusion (VBrU1 and VBrU2 are constant over time) and additional convection (VBrU1 and VBrU2 correspond to the values at t = 0 s). f is the volume ratio between VBrU1 and VBrU2. fsym is the ratio of VBrU1 to the reference volume Vref of 7.76 × 10−3 ml. For more information, see text
| sim | Part 1 | Part 2 | Part 3 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| QBrU1 | uBrU1 | QBrU1 | uBrU1 | QBrU1 | uBrU1 | ||||||||||
| (ml) | (ml/s) | (cm/s) | (cm2/s) | (ml) | (ml/s) | (cm/s) | (cm2/s) | (ml) | (ml/s) | (cm/s) | (cm2/s) | ||||
| 1 | 0.074 | 0.02 0.02 | 0.1 0.3 0.6 | 0.074 | 0.02 0.27 | 0.1 0.3 0.6 | 0.5 | 3.88 7.76 | 2.3 4.6 | 0.135 0.27 | 0.100 | ||||
| 2 | 0.796 | 0.215 0.215 | 0.796 | 0.215 0.27 | 0.225 | ||||||||||
| 3 | 1.000 | 0.27 0.27 | 1.000 | 0.27 0.27 | 0.350 | ||||||||||
| 4 | 1.519 | 0.41 0.41 | 1.519 | 0.41 0.27 | 0.475 | ||||||||||
| 5 | 2.241 | 0.605 0.605 | 2.241 | 0.605 0.27 | 0.600 | ||||||||||
| 6 | 2.963 | 0.8 0.8 | 2.963 | 0.8 0.27 | |||||||||||
Fig. 5Time diagrams of Vg,BrU0(t) (A, B), Vg,BrU1(t) (C, D curves 1, 1′, 2 and 2′) and Vg,BrU2(t) (C, D curves 3, 3′, 4 and 4′) from Part 2 of the parameter study with (dotted lines) and without (solid lines) convection for different time intervals. The curves 1, 1′, 3, and 3′ correspond to the conditions of simulation 1 in Table 3; the curves 2, 2′, 4, and 4′ correspond to those of simulation 6. The vertical lines v1 and v1′ mark the transition from phase 1 to phase 2 of the corresponding curves 1 and 1′. Accordingly, the vertical lines v4 and v4′ mark the phase transitions of the curves 4 and 4′
Fig. 6Time diagrams of Vg,BrU0(t) (A, B) and Vg,BrU1,2(t) (C, D) from the Part 1 of the parameter study for simulations 1 (curves 1 and 1′) and 6 (curves 2 and 2′) from Table 3 with (dotted lines) and without (solid lines) convection for different time intervals
Fig. 7Parameters obtained from the time diagrams Vg,BrU0(t) and Vg,BrU1(t) of Part 1 of the parameter study according to Eq. 22 for pure diffusion (filled circles) and with additional convection (unfilled circles)
Mean values and standard deviations of the coefficients of determination () and root-mean-square errors () with the corresponding minimum and maximum values from the trend line determinations of Vg,BrUi(t) for BrU0 and BrU1 of Parts 1 to 3 each without (first value) and with convection (second value). The diffusion coefficient was 0.3 cm2/s
| Part | Branch unit | ||||
|---|---|---|---|---|---|
| Mean ± SD | Min|max | Mean ± SD | Min|max | ||
| 1 | BrU0 | 0.9903 ± 0.2016 × 10−2 0.9577 ± 0.8025 × 10−1 | 0.9876|0.9925 0.7939|0.9907 | 1.6 × 10−7 ± 3.4 × 10−8 2.2 × 10–7 ± 1.6 × 10−7 | 9.8 × 10−8|1.9 × 10−7 1.4 × 10−7|5.4 × 10−7 |
| BrU1 | 0.9903 ± 0.2016 × 10−2 0.9577 ± 0.8025 × 10−1 | 0.9876|0.9925 0.7939|0.9907 | 7.8 × 10−8 ± 1.7 × 10−8 1.1 × 10−7 ± 8.0 × 10−8 | 4.9 × 10−8|9.5 × 108 7.1 × 108|2.7 × 10−7 | |
| 2 | BrU0 | 0.9829 ± 0.1765 × 10−1 0.9818 ± 0.1973 × 10−1 | 0.9470|0.9919 0.9415|0.9904 | 2.0 × 10–7 ± 9.1 × 10−8 2.0 × 10−7 ± 9.9 × 10−8 | 1.5 × 10−7|3.9 × 10−7 1.6 × 10−7|4.0 × 10−7 |
| BrU1 | Phase 1 | ||||
0.9836 ± 0.1233 × 10−1 0.9849 ± 0.1346 × 10−1 | 0.9594|0.9935 0.9577|0.9935 | 5.6 × 10−7 ± 3.1 × 10−7 5.4 × 10−7 ± 3.1 × 10−7 | 7.6 × 10−8|1.0 × 10−6 7.8 × 10−8|1.0 × 10−6 | ||
| Phase 2 | |||||
0.9982 ± 0.2617 × 10−2 0.9954 ± 0.2146 × 10−2 | 0.9937|0.9999 0.9941|0.9992 | 3.6 × 10−8 ± 2.9 × 10−8 1.1 × 10−7 ± 7.2 × 10–8 | 1.7 × 10−8|8.7 × 10−8 1.3 × 10−8|2.0 × 10−7 | ||
| 3 | BrU0 | 0.9919 ± 0.2000 × 10−3 0.9884 ± 0.1882 × 10−2 | 0.9916|0.9921 0.9863|0.9911 | 1.6 × 10−7 ± 6.1 × 10−8 1.7 × 10−7 ± 4.2 × 10−8 | 1.0 × 10−7|2.6 × 10−7 1.4 × 10−7|2.4 × 10−7 |
| BrU1 | Phase 1 | ||||
0.9956 ± 0.5891 × 10−3 0.9948 ± 0.3536 × 10−3 | 0.9948|0.9963 0.9944|0.9952 | 3.6 × 10−7 ± 2.6 × 10−8 3.9 × 10−7 ± 1.5 × 10−8 | 3.2 × 10−7|3.9 × 10−7 3.7 × 10−7|4.1 × 10−7 | ||
| Phase 2 | |||||
0.9973 ± 0.3493 × 10−3 0.9986 ± 0.2191 × 10−3 | 0.9967|0.9975 0.9983|0.9989 | 5.8 × 10−8 ± 2.2 × 10−8 4.6 × 10−8 ± 1.4 × 10−8 | 3.9 × 10−8|9.5 × 10−8 3.4 × 10−8|6.6 × 10−8 | ||
Fig. 8Parameters obtained from the time diagrams Vg,BrU0(t) of Part 2 of the parameter study according to Eq. 22 for pure diffusion (filled circles) and with additional convection (unfilled circles)
Fig. 9Parameters obtained from the time diagrams Vg,BrU1(t) of Part 2 of the parameter study according to Eq. 22 for pure diffusion (filled circles) and with additional convection (unfilled circles)
Fig. 10Growth constants λBrU0 of BrU0 under the conditions of Part 1 (filled data point symbols) and Part 2 (non-filled data point symbols) for the diffusion coefficients 0.1 cm2/s (triangles), 0.3 cm2/s (rectangles), and 0.6 cm2/s (circles). The values λBrU0 were plotted against the total volume flow QBrU1 + QBrU2 at the branching point. For all data points with volume flows above 5 ml/s, linear trend lines were calculated with Microsoft Excel 2016 and the trend line function as well as the degree of determination R2 were specified
Mean values and standard deviations of the coefficients of determination () and root-mean-square errors () with the corresponding minimum and maximum values from the trend line determinations of Vg,BrU0(t) for BrU0 of Parts 1 (first value) and 2 (second value) for the diffusion coefficients D = 0.1 cm2/s and D = 0.6 cm2/s
| Diffusion coefficient (cm2/s) | ||||
|---|---|---|---|---|
| Mean ± SD | Min|max | Mean ± SD | Min|max | |
| 0.1 | 0.9816 ± 0.2435 × 10−1 0.9853 ± 0.1626 × 10−1 | 0.9319|0.9923 0.9521|0.9921 | 2.6 × 10−7 ± 1.3 × 10−7 2.8 × 10−7 ± 1.5 × 10−7 | 2.0 × 10−7|5.2 × 10−7 2.0 × 10−7|5.9 × 10−7 |
| 0.6 | 0.9271 ± 0.1519 × 100 0.9798 ± 0.2113 × 10−1 | 0.6171|0.9893 0.9367|0.9890 | 1.9 × 10−7 ± 1.7 × 10−7 1.5 × 10−7 ± 7.2 × 10−8 | 1.2 × 10−7|5.5 × 10−7 1.2 × 10−7|3.0 × 10−7 |
Fig. 11Time diagrams of Vg,BrU0(t) (A, B), Vg,BrU1(t) (C, D curves 1, 1′, 2 and 2′) and Vg,BrU2(t) (C, D curves 3, 3′, 4 and 4′) from Part 3 of the parameter study with (dotted lines) and without (solid lines)convection for different time intervals. The curves 1, 1′, 3, and 3′ correspond to the conditions of simulation 1 in Table 3; the curves 2, 2′, 4, and 4′ correspond to those of simulation 5. The vertical lines v1 and v1′ mark the transition from phase 1 to phase 2 of the corresponding curves 1 and 1′. Accordingly, the vertical lines v2 and v2′ mark the phase transitions of the curves 2 and 2′
Fig. 12Parameters obtained from the time diagrams Vg,BrU0(t) of Part 3 of the parameter study according to Eq. 22 for pure diffusion (filled circles) and with additional convection (unfilled circles)
Fig. 13Parameters obtained from the time diagrams Vg,BrU1(t) of Part 3 of the parameter study according to Eq. 22 for pure diffusion (filled circles) and with additional convection (unfilled circles)