Literature DB >> 35788677

Nuclear speckles - a driving force in gene expression.

Gabriel P Faber1,2, Shani Nadav-Eliyahu1,2, Yaron Shav-Tal1,2.   

Abstract

Nuclear speckles are dynamic membraneless bodies located in the cell nucleus. They harbor RNAs and proteins, many of which are splicing factors, that together display complex biophysical properties dictating nuclear speckle formation and maintenance. Although these nuclear bodies were discovered decades ago, only recently has in-depth genomic analysis begun to unravel their essential functions in modulation of gene activity. Major advancements in genomic mapping techniques combined with microscopy approaches have enabled insights into the roles nuclear speckles may play in enhancing gene expression, and how gene positioning to specific nuclear landmarks can regulate gene expression and RNA processing. Some studies have drawn a link between nuclear speckles and disease. Certain maladies either involve nuclear speckles directly or dictate the localization and reorganization of many nuclear speckle factors. This is most striking during viral infection, as viruses alter the entire nuclear architecture and highjack host machinery. As discussed in this Review, nuclear speckles represent a fascinating target of study not only to reveal the links between gene positioning, genome subcompartments and gene activity, but also as a potential target for therapeutics.
© 2022. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  Nuclear bodies; Nuclear organization; Nuclear speckles; Splicing factors

Mesh:

Year:  2022        PMID: 35788677      PMCID: PMC9377712          DOI: 10.1242/jcs.259594

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.235


  173 in total

1.  Factor required for mammalian spliceosome assembly is localized to discrete regions in the nucleus.

Authors:  X D Fu; T Maniatis
Journal:  Nature       Date:  1990-02-01       Impact factor: 49.962

2.  In vivo evidence that transcription and splicing are coordinated by a recruiting mechanism.

Authors:  L F Jiménez-García; D L Spector
Journal:  Cell       Date:  1993-04-09       Impact factor: 41.582

Review 3.  The interchromatin granules.

Authors:  M Thiry
Journal:  Histol Histopathol       Date:  1995-10       Impact factor: 2.303

4.  A role for TREX components in the release of spliced mRNA from nuclear speckle domains.

Authors:  Anusha P Dias; Kobina Dufu; Haixin Lei; Robin Reed
Journal:  Nat Commun       Date:  2010-10-19       Impact factor: 14.919

5.  Splicing factors associate with nuclear HCMV-IE transcripts after transcriptional activation of the gene, but dissociate upon transcription inhibition: evidence for a dynamic organization of splicing factors.

Authors:  R W Dirks; E S de Pauw; A K Raap
Journal:  J Cell Sci       Date:  1997-02       Impact factor: 5.285

6.  Intron-dependent recruitment of pre-mRNA splicing factors to sites of transcription.

Authors:  S Huang; D L Spector
Journal:  J Cell Biol       Date:  1996-05       Impact factor: 10.539

7.  Whole-genome screening identifies proteins localized to distinct nuclear bodies.

Authors:  Ka-Wing Fong; Yujing Li; Wenqi Wang; Wenbin Ma; Kunpeng Li; Robert Z Qi; Dan Liu; Zhou Songyang; Junjie Chen
Journal:  J Cell Biol       Date:  2013-10-14       Impact factor: 10.539

8.  Tyramide signal amplification mass spectrometry (TSA-MS) ratio identifies nuclear speckle proteins.

Authors:  Joseph Dopie; Michael J Sweredoski; Annie Moradian; Andrew S Belmont
Journal:  J Cell Biol       Date:  2020-09-07       Impact factor: 10.539

9.  Ligand effects on phase separation of multivalent macromolecules.

Authors:  Kiersten M Ruff; Furqan Dar; Rohit V Pappu
Journal:  Proc Natl Acad Sci U S A       Date:  2021-03-09       Impact factor: 11.205

10.  Infection-induced chromatin modifications facilitate translocation of herpes simplex virus capsids to the inner nuclear membrane.

Authors:  Vesa Aho; Sami Salminen; Salla Mattola; Alka Gupta; Felix Flomm; Beate Sodeik; Jens B Bosse; Maija Vihinen-Ranta
Journal:  PLoS Pathog       Date:  2021-12-15       Impact factor: 6.823

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