Albert M Schulte1, Georgios Alachouzos1, Wiktor Szymański1,2, Ben L Feringa1. 1. Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands. 2. Department of Radiology, Medical Imaging Center, University Medical Center Groningen, University of Groningen, Hanzeplein 1, 9713 GZ Groningen, The Netherlands.
Abstract
Photolabile protecting groups (PPGs) enable the precise activation of molecular function with light in many research areas, such as photopharmacology, where remote spatiotemporal control over the release of a molecule is needed. The design and application of PPGs in recent years have particularly focused on the development of molecules with high molar absorptivity at long irradiation wavelengths. However, a crucial parameter, which is pivotal to the efficiency of uncaging and which has until now proven highly challenging to improve, is the photolysis quantum yield (QY). Here, we describe a novel and general approach to greatly increase the photolysis QY of heterolytic PPGs through stabilization of an intermediate chromophore cation. When applied to coumarin PPGs, our strategy resulted in systems possessing an up to a 35-fold increase in QY and a convenient fluorescent readout during their uncaging, all while requiring the same number of synthetic steps for their preparation as the usual coumarin systems. We demonstrate that the same QY engineering strategy applies to different photolysis payloads and even different classes of PPGs. Furthermore, analysis of the DFT-calculated energy barriers in the first singlet excited state reveals valuable insights into the important factors that determine photolysis efficiency. The strategy reported herein will enable the development of efficient PPGs tailored for many applications.
Photolabile protecting groups (PPGs) enable the precise activation of molecular function with light in many research areas, such as photopharmacology, where remote spatiotemporal control over the release of a molecule is needed. The design and application of PPGs in recent years have particularly focused on the development of molecules with high molar absorptivity at long irradiation wavelengths. However, a crucial parameter, which is pivotal to the efficiency of uncaging and which has until now proven highly challenging to improve, is the photolysis quantum yield (QY). Here, we describe a novel and general approach to greatly increase the photolysis QY of heterolytic PPGs through stabilization of an intermediate chromophore cation. When applied to coumarin PPGs, our strategy resulted in systems possessing an up to a 35-fold increase in QY and a convenient fluorescent readout during their uncaging, all while requiring the same number of synthetic steps for their preparation as the usual coumarin systems. We demonstrate that the same QY engineering strategy applies to different photolysis payloads and even different classes of PPGs. Furthermore, analysis of the DFT-calculated energy barriers in the first singlet excited state reveals valuable insights into the important factors that determine photolysis efficiency. The strategy reported herein will enable the development of efficient PPGs tailored for many applications.
Photolabile protecting
groups (PPGs) are chemical moieties that
can be synthetically introduced to a substrate of interest and subsequently
be removed simply by irradiation with light of a suitable wavelength.
Due to this unique property, they are widely used to remotely control
the concentration of molecules with a particular function of interest
(payloads)[1−6] because they allow for high spatiotemporal control over the payload
release. PPGs have proven their utility in a variety of fields, ranging
from molecular biology and organic synthesis to materials science.[7−12]A critical property fundamental to the applicability of PPGs
is
the efficiency of payload release. This efficiency is captured in
the mathematical product of two factors: (i) the ability of the PPG
to absorb photons at the irradiation wavelength (represented by the
molar attenuation coefficient ε, M–1 cm–1) and (ii) the photochemical uncaging process quantum
yield (φ, QY). In recent years, significant progress has been
made in improving the first parameter, especially directed at the
development of PPGs with high ε at bathochromically shifted
irradiation wavelengths.[13−19] However, thus far, enhancing the second parameter—the photochemical
QY—has remained challenging. Given the role of QY in the overall
efficiency of uncaging, a general strategy for reliably increasing
QY is needed, and this would represent a major step forward for the
field of PPG development.The importance of photochemical quantum
yield is exemplified in
the field of photopharmacology, where PPGs are used to suppress the
activity of a bioactive payload in the covalently bound photocaged
form. Subsequent on-site release of the bioactive molecule is achieved
through light irradiation, preventing systemic side effects in nonirradiated
areas.[1,2,20−24] The importance of molar absorptivity (ε) has been widely recognized
in photopharmacology and has led to impressive progress for red- or
green-light responsive PPGs featuring high ε, such as those
derived from the BODIPY and coumarin scaffolds.[14,17−19,25] However, in most cases,
high ε at long irradiation wavelengths was achieved at the expense
of photochemical QY, negatively affecting the overall efficiency of
these PPGs.[26] Few exceptions to this trend
often rely on the introduction of extended π-systems with strongly
electron-donating moieties into the PPG structure, yet these strategies
come at a great synthetic step cost, and the flat, extended π-systems
suffer from low aqueous solubility, restricting their use in photopharmacology.[27,28]Here, we present a rational strategy for increasing PPG efficiency,
hinging on a detailed investigation into the important factors that
determine PPG QYs. Taking fundamental organic chemistry principles
as the starting point and supporting them with a DFT computational
approach, we focused on 7-diethylaminocoumarins as a model class of
PPGs. The synthetic accessibility of coumarins and their visible light
responsiveness[12,29] have led to their privileged
use for the photocaging of various functionalities, such as carboxylic
acids, alcohols, and amines (as their carbonate and carbamate esters,
respectively),[30] making them an ideal showcase
for our strategy. Furthermore, we also show that our strategy is general
and extends to other classes of PPGs that utilize heterolytic bond
cleavage in their photochemical step, as opposed to different classes
of PPGs, such as ortho-nitrobenzyls, whose uncaging
mechanism relies on other processes.[3] Finally,
we demonstrate how the fluorescence increase that we observe during
the uncaging of the new subtype of PPGs introduced here can be used
as a convenient readout of the progress of the uncaging process in
a complex biological system.
Mechanism of Coumarin PPG Photocleavage
The mechanism
of photocleavage of coumarin PPGs relies on heterolytic bond cleavage
in the first singlet excited state (S1).[30] After photon absorption to S1, weakening of
the bond between the payload and the α-carbon allows for the
excited state breakage of this bond (Scheme , k1).[30,31] Upon breakage of the payload-PPG bond, a contact ion pair (CIP)
intermediate is formed, in which the positive charge is located on
the coumarin chromophore and the negative charge on the payload.[30−33] The formed CIP intermediate can now undergo two different processes:
(i) the unproductive process, i.e., recombination to reform the substrate
(Scheme , red k–1), or (ii) the productive process that results in
payload release: diffusion to a solvent separated ion pair (SSIP,
not shown) accompanied by solvent trapping to quench the carbocation
(Scheme , both processes
combined in blue k2).
Scheme 1
Schematic Representation of the Coumarin
Photocleavage Mechanism
Highlighting the Contact Ion Pair (CIP) Intermediate
Shown
is a model coumarin with
a model carboxylic acid payload, in which the fused aromatic ring
of the coumarin chromophore is abbreviated by a semicircle.
Schematic Representation of the Coumarin
Photocleavage Mechanism
Highlighting the Contact Ion Pair (CIP) Intermediate
Shown
is a model coumarin with
a model carboxylic acid payload, in which the fused aromatic ring
of the coumarin chromophore is abbreviated by a semicircle.Lowering the energy of the CIP through the use of
payloads that
effectively stabilize the generated negative charge (i.e., payloads
with a low pKa of their conjugate acid) has been shown to improve
photochemical QY.[31] However, engineering
an increase of the QY in this manner is impractical or often even
impossible, since the stability of the negative charge is inherent
to the payload and cannot be conveniently engineered without compromising
other payload chemical properties (e.g., its bioactivity). On the
other hand, the stabilization of the other component of the CIP, the
PPG chromophore cation, represents an underexplored and potentially
superior approach in that it would offer a general strategy for increasing
the QY of PPGs that rely on heterolytic bond cleavage, independent
of the chemical nature of the payload.
Design
Although
CIP formation is a fast process in
coumarin PPGs, recombination of the CIP (k–1) is
significantly faster than the competing productive pathway k2.[31] Based on this observation, it was
deduced that rather than promoting heterolysis toward CIP formation,
slowing down CIP recombination itself (i.e., lowering k–1) would be a viable strategy to significantly increase PPG photochemical
QY.In the coumarin photocleavage process, the positive charge
on the α-carbon (adjacent to the payload, Scheme ) in the CIP intermediate cannot be efficiently
stabilized through delocalization or hyperconjugation. Being a primary
cation, it is expected to be high in energy, favoring CIP recombination
back to the substrate rather than the productive step (Figure a, k–1 and
k2, respectively). Based on this simple analysis, we sought
to increase photolysis efficiency through direct stabilization of
this cationic intermediate, thereby retarding its unproductive recombination
by increasing the kinetic barrier for this process (Figure a vs 1b, k–1). We hypothesized that the rate of CIP diffusion followed by solvent
trapping (Figure ,
k2) depends on constant coulombic forces and will be independent
of the overall CIP stability. Therefore, while stabilization of the
cationic intermediate will increase the barrier of the unproductive
step k–1, it will not increase the barrier of the
productive step k2. Consequentially, it will result in
a higher ratio of the rates of k2 over k–1, increasing the overall PPG photochemical QY (Figure b).
Figure 1
(a) Energy diagram of the coumarin photolysis
mechanism after excitation,
showing an unstable CIP intermediate resulting in a high rate of CIP
recombination, a relatively low rate of the productive step (k2), and consequentially a low photochemical QY. (b) A stabilized
CIP intermediate, reducing the rate of CIP recombination and consequentially
increasing the photochemical QY. (c) Coumarin PPGs bearing substituents
on the α-carbon (black) stabilizing the cationic intermediate
through delocalization and hyperconjugation, as described in this
paper. All coumarins are caging an acetic acid payload (gray).
(a) Energy diagram of the coumarin photolysis
mechanism after excitation,
showing an unstable CIP intermediate resulting in a high rate of CIP
recombination, a relatively low rate of the productive step (k2), and consequentially a low photochemical QY. (b) A stabilized
CIP intermediate, reducing the rate of CIP recombination and consequentially
increasing the photochemical QY. (c) Coumarin PPGs bearing substituents
on the α-carbon (black) stabilizing the cationic intermediate
through delocalization and hyperconjugation, as described in this
paper. All coumarins are caging an acetic acid payload (gray).In fact, intermediate cation stabilization through
hyperconjugation
via methyl substitution at the carbon bearing the payload to produce
“secondary coumarins” has been previously attempted,
but only showed marginal improvements in quantum yield.[34] Consequently, given the stability of allylic
cations, we hypothesized that installing an allylic system onto the
coumarin α-carbon (Figure c, Allylic) should significantly stabilize
the incipient positive charge formed upon photoheterolysis. Since
the double bond in the allylic substituent is not in conjugation with
the chromophore, its influence on photochemical and photophysical
properties would likely be restricted to CIP cation stability after
photoheterolysis, while the wavelength of absorption and the molar
attenuation coefficient should be relatively unaffected. Mono- or
di-methyl substitution on the allylic system (Figure c, compounds 2 and 3) was expected to confer extra stabilization through hyperconjugation
and further increase cation stability. In a similar fashion, we hypothesized
that direct geminal dimethylation of the α-carbon itself would
stabilize the incipient CIP tertiary cation through hyperconjugation
(Figure c, Tertiary 4), in line with results we reported earlier this year.[19]Energy barriers for the k1 and k–1 steps
for
designed coumarins 1–4 and model primary and secondary
coumarins as calculated by DFT (obtained at the MN15/Def2SVP/SMD =
H2O level of theory).(a) Partial 1H-NMR spectrum of the alcohol photoproduct
isolated after dilute irradiation of 3 (water/MeCN 9:1
∼190 μM, λ = 400 nm, 5 min, spectrum in CDCl3) and AcOH signal obtained after irradiation of 3 in 1:1 DMSO-d6/D2O. For the
full spectra, please see the Supporting Information, Section 7. (b) Partial 1H-NMR spectrum obtained
after irradiation of 4 in 1:1 DMSO-d6/D2O (λ = 400 nm, 30 min) and AcOH signal
obtained after irradiation of 3 in 1:1 DMSO-d6/D2O and spiking with AcOH. (c) Absorption
spectra of the allylic coumarins (water/acetonitrile, 99:1), freshly
prepared solutions, and solutions after irradiation (λ = 390
nm) for the times indicated. (d) Overview of the observed photoproducts
after irradiation for the allylic coumarins 1–3 and tertiary coumarin 4, relative amounts were determined
by UPLC-MS peak integration. (e) Quantum yields for the uncaging of
coumarin acetates in water/acetonitrile (3–5% MeCN), shown
are averages and SD-values from triplicate measurements. (f) Exponential
plot of photochemical QY and DFT-calculated k1 barrier
height. (g) Exponential plot of photochemical QY and DFT-calculated
k–1 over k1 barrier height. The linear
curve fit indicates the exponential dependence of QY on the relative
barrier height.
Results
DFT Calculations
Density functional theory (DFT) calculations
were performed to study the effect of the nature of the allylic or
tertiary cations on the calculated energy barriers of CIP formation
and recombination in the first singlet excited state (S1, Figure , ΔGk1 and ΔGk–1, respectively). In all computed structures, acetic acid was chosen
as the simple model payload. Geometries were optimized at the MN15/Def2SVP/SMD
= H2O level of theory,[35−37] and the energy barriers
shown are extrapolated from the ZPE-corrected free energies obtained
at the same level of theory. The employed level of theory was expected
to give a good balance of computational cost to computed free energy
accuracy, although it should be noted that DFT ground state or TD-DFT
excited-state calculations with implicit solvent model SMD for reactions
involving neutral and ion pair species may be prone to errors. Given
that literature describes CIP recombination and relaxation to S0 as a concerted process,[30,31] we decided
to consider both S0 and S1 cations in our calculations.
However, we were unable to find a stable CIP at the S0 energy
level (vide infra, page 10) and therefore based our calculations on
the S1 energy level. For the designed compounds 1–4 (Figure c), the barrier of CIP recombination was calculated
to be significantly increased as compared to a reference primary coumarin
with the same acetic acid payload (Figure , red bars). The extent of increase followed
an expected trend depending on the degree of hyperconjugation and
delocalization. Cation stabilization through allyl substitution on
coumarins 1–3 was found to increase
the energy barrier of CIP recombination more than hyperconjugation
did in tertiary coumarin 4. Although the heterolysis
barrier k1 also differed depending on the substituents
on the α-carbon (Figure , gray bars), less variation was observed in the energy levels
of this barrier. The k1 barriers for allylic coumarins 1–3 were predicted to be energetically nearly identical
(Figure , gray bars).
Figure 2
Energy barriers for the k1 and k–1 steps
for
designed coumarins 1–4 and model primary and secondary
coumarins as calculated by DFT (obtained at the MN15/Def2SVP/SMD =
H2O level of theory).
Synthesis
Encouraged by the DFT calculations that predicted
significantly increased energy barriers for CIP recombination in the
designed coumarin-based PPGs, we set out to synthesize compounds 1–4 and study their photochemical properties.
The newly designed photocages were all synthesized through a previously
reported aldehyde intermediate 5.[38] Reactions of this aldehyde with a variety of allylic Grignard
reagents gave the three allylic coumarin alcohols with varying methyl
substitution at the northern sp2-carbon (Scheme ). The model photocage—primary
coumarin alcohol—is generally also obtained through one synthetic
step from the same aldehyde, highlighting the synthetic accessibility
of allylic coumarins 6–8. Subsequently, the allylic
coumarin alcohols were loaded with the model payload acetic acid through
acetylation with acetic anhydride in the presence of DMAP as a nucleophilic
catalyst.
Scheme 2
Synthetic Route for the Formation of Allylic Coumarins 1–3 and Tertiary Coumarin 4
Alcohol
precursors (blue) were
synthesized and acetylated to yield model compounds 1–4 (red).
Synthetic Route for the Formation of Allylic Coumarins 1–3 and Tertiary Coumarin 4
Alcohol
precursors (blue) were
synthesized and acetylated to yield model compounds 1–4 (red).The synthesis
of tertiary coumarin 4 started from
secondary coumarin alcohol 9, which was oxidized to the
ketone and treated with a methyl Grignard reagent to produce the tertiary
alcohol 10 (Scheme ). Tertiary alcohol 10 was loaded with
the same model payload acetic acid through acetylation to yield coumarin 4.
Photochemistry
With the synthesized
compounds 1–4 in hand, we sought
to explore their
photochemical properties using UV–vis spectroscopy and 1H-NMR analysis. Gratifyingly, irradiation (λ = 400 nm)
of 1–4 followed by 1H-NMR
analysis confirmed that all compounds released the payload acetic
acid upon irradiation (Figure a,b and SI Section 7). UV–vis
spectroscopy (Figure c) revealed that the absorption maxima of 1–3 were indeed comparable to that of primary coumarin: absorption
spectra of 1–3 showed an average
4 nm red-shift as compared to that of the primary coumarin model (λmax = 396 and 392 nm, respectively). As presumed, the molar
attenuation coefficients of allylic coumarins 1–3 were similar to that of primary coumarin with an acetic
acid payload (ε values = 13.700–17.500 M–1 cm–1). Irradiation (λ = 390 nm) of compounds 1–4 in water led to rapid (within seconds)
changes in absorption spectra with clear isosbestic points (Figure c). Analysis of irradiated
samples by 1H-NMR and UPLC-MS revealed that allylic coumarins 1–3 formed the corresponding allylic alcohols
upon irradiation, the result of water trapping of the cationic intermediate
(Figure a,d). In contrast,
tertiary coumarin 4 underwent elimination toward an alkene
rather than water trapping (Figure b,d). Furthermore, for two allylic coumarins 1–2, upon irradiation, a small fraction
(∼15%) of a product with a mass identical to the substrate
was observed. This is believed to be the result of acetate payload
rearrangement to the allylic carbon (Figure d and SI Section 9). Irradiation of allylic coumarin 3 did not result
in payload rearrangement, and this compound displayed clean conversion
to the alcohol as a result of water trapping (Figure d).
Figure 3
(a) Partial 1H-NMR spectrum of the alcohol photoproduct
isolated after dilute irradiation of 3 (water/MeCN 9:1
∼190 μM, λ = 400 nm, 5 min, spectrum in CDCl3) and AcOH signal obtained after irradiation of 3 in 1:1 DMSO-d6/D2O. For the
full spectra, please see the Supporting Information, Section 7. (b) Partial 1H-NMR spectrum obtained
after irradiation of 4 in 1:1 DMSO-d6/D2O (λ = 400 nm, 30 min) and AcOH signal
obtained after irradiation of 3 in 1:1 DMSO-d6/D2O and spiking with AcOH. (c) Absorption
spectra of the allylic coumarins (water/acetonitrile, 99:1), freshly
prepared solutions, and solutions after irradiation (λ = 390
nm) for the times indicated. (d) Overview of the observed photoproducts
after irradiation for the allylic coumarins 1–3 and tertiary coumarin 4, relative amounts were determined
by UPLC-MS peak integration. (e) Quantum yields for the uncaging of
coumarin acetates in water/acetonitrile (3–5% MeCN), shown
are averages and SD-values from triplicate measurements. (f) Exponential
plot of photochemical QY and DFT-calculated k1 barrier
height. (g) Exponential plot of photochemical QY and DFT-calculated
k–1 over k1 barrier height. The linear
curve fit indicates the exponential dependence of QY on the relative
barrier height.
The quantum yields of PPG consumption
were determined by UV–vis spectroscopy in water with a small
amount of acetonitrile. As reference model compounds, widely used
primary and secondary coumarin PPGs with the same acetic acid payload
were also studied. To our delight, cation stabilization resulted in
a remarkably high QY for all newly designed coumarins, with the allylic
coumarin 3 showing a QY as high as 27%, a 16-fold increase
over its primary coumarin model (Figure e). Notably, uncaging cross sections of up
to ∼3.7 × 103 were achieved with the allylic
coumarins 1–3 (Table ).
Table 1
Photochemical Properties
of Coumarin
PPGs 1–4 and Model 1 and 2°
Coumarinsa
PPG
CPD no.
λmax (nm)
ε (L mol–1 cm–1)/103
QY
ε × QY/103
ΔG‡k–1 (kcal mol–1)
1°
393
16.4
0.017
0.27
2.23
2°
389
18.2
0.024
0.44
3.27
3°
4
394
15.9
0.105
1.7
9.82
1
398
17.5
0.157
2.7
12.51
allylic
2
397
16.6
0.192
3.2
13.74
3
396
13.8
0.270
3.7
15.60
Included are λmax values, molar absorptivity (ε) at λ = 400 nm,
quantum
yield (QY), uncaging cross section at λ = 400 nm (ε ×
QY), and the energy barrier for CIP recombination, as calculated by
DFT (ΔG‡k–1).
Included are λmax values, molar absorptivity (ε) at λ = 400 nm,
quantum
yield (QY), uncaging cross section at λ = 400 nm (ε ×
QY), and the energy barrier for CIP recombination, as calculated by
DFT (ΔG‡k–1).To rationalize these
results, the observed heterolysis QYs were
compared to the heterolysis energy barriers of CIP formation and recombination,
as calculated by DFT. Gratifyingly, we found that the barrier height
of the unproductive k–1 process (the CIP recombination)
was a good predictor for the quantum yield (SI, Figure S93). In contrast, we observed that the calculated
energy barrier for the k1 process correlated poorly to
photochemical QY (Figure f). These findings confirm our initial hypothesis that the
limiting factor in coumarin photochemical QY is CIP recombination,
rather than CIP formation itself. Also, the relative barrier height
ratio of k–1 over k1 showed a strong
correlation with photochemical QY, exhibiting an exponential relationship
between this relative barrier height ratio and the QY (Figure g). These results demonstrate
that retarding CIP recombination results in drastic enhancements in
photochemical QY, and, moreover, confirm this as a viable strategy
for improving the PPG efficiency. A possible explanation for the poor
correlation of k1 barrier height to the QY could be that
this barrier is partially overcome through excitation to a higher
vibrational level in S1, regardless of the nature of the
incipient CIP cation. This hypothesis is supported by the large Stokes
shift of 7-diethylamino-coumarins (Supporting Information, Figure S49), suggesting that a higher S1 vibrational level is almost always accessed upon excitation. Although
the barrier height of the seemingly important productive forward step
k2 is not included in this calculation, our calculations
nonetheless provide an exponential trend correlating the reversibility
of CIP formation to QY. This suggests that the k2 barrier
height is energetically comparable for all shown coumarin photocages,
also confirming our initial hypothesis that this barrier is largely
independent of CIP stability. This is plausible, since both the acetate
payload and the photoproduct cations in the CIPs formed from the photoheterolysis
of each PPG variant 1–4 are similar
in their electrostatic topology and thus must be similar in their
Coulombic nature. Thus, the diffusion rate out of the CIP, ultimately
resulting in productive cation trapping by the solvent, would be expected
to be near-identical for each PPG variant 1–4.The photochemical quantum yield of tertiary coumarin 4 (Figure g, dark
blue) did not fit the predicted trend. This discrepancy can be explained
by the fact that tertiary coumarin 4 exhibits a different
mechanism of CIP escape. Whereas the usual mechanism of CIP escape
is diffusion followed by solvent trapping, tertiary coumarin exhibited
elimination toward an alkene (Figure b). Since the photochemical quantum yield of tertiary
coumarin is higher than expected (i.e., it can be found above the
curve fit), it can be concluded that its deprotonation barrier must
be lower than the k2 barrier for the Allylic coumarins 1–3 and primary and secondary coumarins.
Currently, we are performing further studies on the effect of the
k2 barrier on PPG photoheterolysis efficiency.In
literature describing the coumarin PPG mechanism of photocleavage,
often CIP recombination and relaxation to S0 is reported
as a concerted process (i.e., a conical intersection of the S1 and S0 potential energy surfaces exists at the
CIP recombination event).[30,31] However, one must also
consider the possibility that relaxation back to S0 happens
before CIP recombination and, thus, that CIP recombination happens
on the S0 potential energy surface. We could not find definitive
evidence for this situation, but nonetheless, we attempted to calculate
the energy barriers for CIP recombination on the S0 potential
energy surface as well. Our DFT calculations were unable to find a
stable CIP in the S0 state or even a heterolysis transition
state for all described coumarins 1–4. Although we can’t fully exclude some extent of recombination
occurring in the ground state, the good correlation of the measured
QYs with the S1 energy barriers suggests that CIP recombination
in S1 seems the most reasonable. In a recent paper by Contreras-García
et al., no local minimum was found either for the ion pair—and
thus no energy barrier for CIP recombination—in the ground
state.[39]
Allylic Substitution as
a General Strategy for Quantum Yield
Enhancement
Since the photochemical QY improvement of coumarin
photocages was achieved through the stabilization of the cationic
chromophore component of the CIP, we predicted that it would be a
general strategy for QY improvement that would also hold for payloads
other than carboxylic acids. To explore this generality, the allylic
PPG with the highest QY (compound 3) was also used to
cage and release another moiety that is often photocaged in bioactive
payloads: an amine group. Due to their inability to stabilize a negative
charge, amines are generally photocaged as their carbamate analogues.[40] Two photocages bearing an amine payload were
synthesized, one bearing the allylic substituent on the α-carbon (Figure a, 12, red) and a primary reference compound (Figure a, 11, black).
Upon comparing their photochemical quantum yields, we were pleased
to find that the allylic carbamate also displayed very efficient photolysis.
Its quantum yield underwent an >35-fold improvement over that of
the
model primary coumarin bearing the same carbamate payload, an even
more pronounced effect than the one that was observed for acetate
payloads. These results highlight the robustness of this approach:
PPG cation stabilization is a general way to slow down CIP recombination,
which is expected to improve photochemical QY for a diverse subset
of payloads.
Figure 4
(a) Quantum yields (55 μM, 9:1 water/MeCN) of coumarin-carbamates 11 (black bar) and 12 (red bar). Irradiation-dependent
absorption spectra (20 μM, water/MeCN 99:1) of coumarin-carbamate 12. (b) Relative uncaging rate of BODIPY 13 (black
bar) and 14 (blue bar) (10 μM, water/MeCN 9:1).
Irradiation-dependent absorption spectra (10 μM, water/MeCN
9:1) of BODIPY 14.
(a) Quantum yields (55 μM, 9:1 water/MeCN) of coumarin-carbamates 11 (black bar) and 12 (red bar). Irradiation-dependent
absorption spectra (20 μM, water/MeCN 99:1) of coumarin-carbamate 12. (b) Relative uncaging rate of BODIPY 13 (black
bar) and 14 (blue bar) (10 μM, water/MeCN 9:1).
Irradiation-dependent absorption spectra (10 μM, water/MeCN
9:1) of BODIPY 14.Finally, we aimed to see if this optimization strategy holds also
for a different member of the class of heterolytic PPGs. Arguably,
all PPGs belonging to this class would benefit from a stabilized incipient
chromophore cation through allylic substitution at the α-carbon.
To illustrate this, we set out to introduce allylic substitution on
another widely used class of photocages, BODIPY PPGs. Allylic-BODIPY
PPG 14 (Figure b, blue) was synthesized and confirmed to release acetic acid
upon irradiation (SI Section 7). Interestingly,
rather than photobleaching that is often observed for BODIPY photocages,
Allylic-BODIPY PPG 14 showed clean conversion to a different
BODIPY photoproduct with a clear isosbestic point (Figure b). The photoproduct is likely
the result of water trapping of the cation (1H-NMR, SI Figure S60). Finally, the rate of deprotection
of Allylic-BODIPY PPG 14 was compared to that of primary
BODIPY 13 at the same concentration. A 7-fold improvement
in rate was found. Since the molar attenuation coefficients at the
irradiation wavelength (λ = 530 nm) for both compounds are virtually
the same (see the Supporting Information for details), the samples exhibited very similar absorption, allowing
us to translate the rate improvement directly to the 7-fold improvement
in quantum yield. These findings illustrate the versatility of this
simple principle: our strategy of cation stabilization results in
significant improvements in photochemical QY and holds for multiple
types of PPGs.
Fluorescence Properties of the Coumarin Uncaging
Product
In the photoheterolysis process in aqueous media,
the allylic coumarin
PPGs 1–3 undergo water trapping to
form alcohols. Large-scale irradiation of allylic coumarin 3 with dimethyl substitution allowed for the detailed characterization
of its photoproduct. The isolated alcohol 15 (Figure b) was presumably
the result of an irradiation-dependent SN1′ type
of reaction, in which the double bond had rearranged (Figure a) and water trapping occurred
at the northern tertiary carbon atom, likely due to the higher stability
of the cation at this position. Due to the extended conjugation of
the chromophore established after the double bond had rearranged,
the absorption spectrum of this photoproduct showed a bathochromic
shift as compared to the starting material (Figure c). Fluorescence characterization of this
compound also revealed a pronounced bathochromic shift of its fluorescence
emission spectrum as compared to the photocaged substrate, with the
photoproduct showing an intense emission band between 550 and 650
nm (Figure b) and
a fluorescence quantum yield of ∼10% (See the SI, Section 6). Because of the bathochromic shift of both
the absorption- and emission spectrum of the photoproduct, during
the deprotection process, the fluorescence signal of the photoproduct
could be addressed almost exclusively through excitation and emission
readout at red-shifted wavelengths (λ = 434 and 565 nm, respectively).
Figure 5
(a) Structure
of the fluorescent coumarin uncaging product formed
after irradiation of allylic coumarins 1–3. (b) Normalized fluorescence spectrum of the photoproduct
of allylic coumarin 3 (20 μM, Water/MeCN 99:1).
(c) Normalized fluorescence spectra of allylic coumarins 1–3 (20 μM, Water/MeCN 99:1, λexc: 434 nm). Fluorescence
spectra of the same samples were recorded before (black curves) and
after irradiation (λmax = 400 nm, 90 s, red curves).
(a) Structure
of the fluorescent coumarin uncaging product formed
after irradiation of allylic coumarins 1–3. (b) Normalized fluorescence spectrum of the photoproduct
of allylic coumarin 3 (20 μM, Water/MeCN 99:1).
(c) Normalized fluorescence spectra of allylic coumarins 1–3 (20 μM, Water/MeCN 99:1, λexc: 434 nm). Fluorescence
spectra of the same samples were recorded before (black curves) and
after irradiation (λmax = 400 nm, 90 s, red curves).In a similar way, allylic coumarin 2 also showed conversion
to the rearranged alcohol upon irradiation, enabling a similar fluorescence
readout of the uncaging process (Figure c). In contrast, upon irradiation, allylic
coumarin 1 produced a mixture of both the rearranged
alcohol and the product of direct water substitution at the α-carbon,
slightly affecting its fluorescence response (Figure c). However, since the rearranged alcohol
had distinct fluorescence properties, a similar fluorescent sensitivity
for the uncaging process could be achieved at red-shifted wavelengths.
It should be strongly emphasized that the significant enhancement
in fluorescent properties for allylic coumarins 1–3 upon irradiation can be used to follow the payload release through
normalization of the fluorescence signal.[41−43]To illustrate
the utility of the allylic PPGs 1–3 and their fluorescence properties, we aimed to use the PPGs
to photocage a model bioactive compound and release this compound
upon irradiation in a process whose progress could be independently
followed solely by fluorescence. Due to our lab’s experience
in the photoactivation of antibiotics,[44−47] we have chosen piperacillin—a
potent member of the β-lactam class—as a model bioactive
compound.Since the caged antibiotics were to be used in a 24-h
bacterial
growth assay, the hydrolytic stability of the model photocaged compounds 1–3 was first evaluated. Allylic photocages 1 and 2 showed excellent hydrolytic stability,
forming no hydrolysis product after 15 h at 25 °C in the dark.
Allylic photocage 3, however, showed slight hydrolysis
after 15 h, likely by virtue of its superior cation stability after
hydrolysis (SI, Figure S89). Given its
greater hydrolytic stability, it was decided to use allylic photocage 1 for the construction of the caged antibiotics whose activation
can be followed by fluorescence.In an initial assay, the minimal
inhibitory concentration (MIC)
of piperacillin towardEscherichia coliCS1562 was determined to be 0.5–1.0 μM (SI, Figure S84). The required photocaged piperacillin 16 (Figure a) was conveniently obtained through a Steglich esterification of
piperacillin with the corresponding allylic alcohol 6.
Figure 6
(a) Irradiation of allyl-piperacillin 16 resulting
in the formation of the antimicrobial and a fluorescent reporter of
payload release. (b) Fluorescence response of allyl-piperacillin 16 upon irradiation (20 μM, water/acetonitrile 8:2,
irradiation at λmax = 400 nm, fluorescence excitation
at λ = 434 nm, readout at λ = 565 nm). (c) Results of
the antimicrobial assay. The predicted piperacillin concentrations
calculated from the fluorescence response are reported, as well as
the irradiation time (in seconds). Blue bars show bacterial growth,
indicating piperacillin concentrations below the MIC. Red bars show
full growth inhibition, indicating piperacillin concentrations above
the MIC.
(a) Irradiation of allyl-piperacillin 16 resulting
in the formation of the antimicrobial and a fluorescent reporter of
payload release. (b) Fluorescence response of allyl-piperacillin 16 upon irradiation (20 μM, water/acetonitrile 8:2,
irradiation at λmax = 400 nm, fluorescence excitation
at λ = 434 nm, readout at λ = 565 nm). (c) Results of
the antimicrobial assay. The predicted piperacillin concentrations
calculated from the fluorescence response are reported, as well as
the irradiation time (in seconds). Blue bars show bacterial growth,
indicating piperacillin concentrations below the MIC. Red bars show
full growth inhibition, indicating piperacillin concentrations above
the MIC.Irradiation of photocage 16 showed the expected emergence
of a fluorescent response due to double bond rearrangement (Figure b). The predicted
degree of payload release was calculated from the fluorescence signal
through an exponential decay curve fit and was corrected for the observed
amount of payload rearrangement (10%, UPLC-MS, SI). To our delight,
the predicted concentrations of the liberated piperacillin (obtained
after irradiation with λ = 400 nm light for much less than a
minute) corresponded perfectly to bacterial growth inhibition (Figure c). A predicted piperacillin
concentration of 0.88 μM showed bacterial growth inhibition,
whereas 0.66 μM still allowed for bacterial growth. This indicates
that the fluorescence-determined MIC was 0.66–0.88 μM,
well within our independently determined MIC of 0.5–1.0 μM.These results confirm the practical utility of the allylic photocages
reported herein and illustrate the reliability of the fluorescent
signal that can be used to quantitatively predict the amount of bioactive
payload released in biological assays. In sum, our newly developed
PPGs 1–3 developed using the QY enhancement strategy
described herein allowed for the rapid release of complex biological
payloads while enabling a convenient fluorescence readout method for
monitoring the uncaging process.
Discussion
In
this study, we identify an approach for preventing CIP recombination
in PPG photolysis as a key strategy to greatly increase the photolysis
QY. The QY enhancement strategy is supported by DFT calculations,
which predict higher energy barriers for the recombination process.
An excellent correlation between the reversibility k–1 of the heterolytic step and the photochemical quantum yield was
observed. We also concluded that a poor correlation exists between
the calculated k1 barrier and our measured QYs and have
thus demonstrated that preventing recombination of the CIP, rather
than kinetically stimulating its formation, is a crucial strategy
in increasing PPG efficiency. Furthermore, we showed that our strategy
for increasing PPG efficiency through incipient cation stabilization
is general for different payloads (carboxylic acids and amines) and
for different PPG classes (coumarin and BODIPY PPGs), again demonstrating
the versatility of this simple principle.Given their synthetic
accessibility and high photochemical QYs,
the efficient PPGs 1–3 themselves, designed applying
the cation stabilization strategy showcased herein, could prove valuable
in assays that require near-instant release of a payload, such as
those in time-resolved structural biology studies.[48] Furthermore, the fluorescent readout of PPGs 1–3 can be reliably used to quantify the amount of complex biological
payload release in complex biological environments, as is also demonstrated.We believe the new PPG design strategy demonstrated herein directly
addresses the need for increasing PPG efficiency in the rapidly expanding
research fields that rely on precise activation of molecular function
with light. Our QY engineering strategy will undoubtedly prove valuable
for the development of ideal photocages tailored for more complex
applications, for example (but not limited to), red-shifted photocages
with high quantum yields for use in photopharmacology.
Authors: Heather J Montgomery; Basil Perdicakis; Dan Fishlock; Gilles A Lajoie; Eric Jervis; J Guy Guillemette Journal: Bioorg Med Chem Date: 2002-06 Impact factor: 3.641
Authors: Willem A Velema; Jan Pieter van der Berg; Wiktor Szymanski; Arnold J M Driessen; Ben L Feringa Journal: ACS Chem Biol Date: 2014-07-25 Impact factor: 4.634