| Literature DB >> 35768814 |
Lian-Tao Hu1,2, Wen-Jun Deng1,2, Zhen-Sheng Chu1,2, Luo Sun2,3, Chun-Bin Zhang4, Shi-Zhen Lu1,2, Jin-Ru Weng2,5, Qiao-Sheng Ren2,5, Xin-Yu Dong1,2, Wei-Dong Li1,2, Xue-Bin Li2,3, Yun-Ting Du6, Yue Li7,8, Wei-Qun Wang9,10.
Abstract
BACKGROUND: The expression profiles and molecular mechanisms of CXC chemokine receptors (CXCRs) in Lung adenocarcinoma (LUAD) have been extensively explored. However, the comprehensive prognostic values of CXCR members in LUAD have not yet been clearly identified.Entities:
Keywords: CXC chemokine receptors (CXCRs); Lung adenocarcinoma (LUAD); Prognostic values
Mesh:
Substances:
Year: 2022 PMID: 35768814 PMCID: PMC9245315 DOI: 10.1186/s12890-022-02051-6
Source DB: PubMed Journal: BMC Pulm Med ISSN: 1471-2466 Impact factor: 3.320
Fig. 1Transcriptional expressions of different CXCR family members in different types of cancers. The data were compared by the t-test and cut-off P-value and fold change were as following: P-value < 0.05, fold change = 1.5, gene rank = 10%. (Red indicates over-expression, blue indicates down-expression)
CXCR1, CXCR2, CXCR4, CXCR5 and CXCR7 displayed significant regulated expression in lung cancer compared to normal from Oncomine
| Types of lung cancer versus normal | Fold change | t-test | FDR | Ref | ||
|---|---|---|---|---|---|---|
| CXCR1 | Lung Carcinoid Tumor versus normal | 3.098 | 0.006 | 2.741 | 0.006375 | Bhattacharjee lung |
| Squamous Cell Lung Carcinoma versus normal | − 6.385 | 4.58E−08 | − 6.724 | 9.73E−08 | Bhattacharjee lung | |
| Lung Adenocarcinoma versus normal | − 3.22 | 4.71E−07 | − 6.221 | 8.01E−07 | Bhattacharjee lung | |
| Lung Adenocarcinoma versus normal | − 2.073 | 1.19E−06 | − 5.572 | 1.69E−06 | Stearman lung | |
| CXCR2 | Large Cell Lung Carcinoma versus normal | − 4.492 | 1.17E−14 | − 10.806 | 6.63E−14 | Hou lung |
| Lung Adenocarcinoma versus normal | − 3.109 | 4.20E−16 | − 9.451 | 7.14E−15 | Hou lung | |
| Squamous Cell Lung Carcinoma versus normal | − 3.426 | 1.19E−13 | − 9.102 | 5.06E−13 | Hou lung | |
| Lung Adenocarcinoma versus normal | − 1.536 | 1.76E−11 | − 8.097 | 4.99E−11 | Selamat lung | |
| CXCR4 | Squamous Cell Lung Carcinoma versus normal | 2.676 | 6.13E−07 | 5.402 | 9.47E−07 | Talbot lung |
| Lung Adenocarcinoma versus normal | − 2.907 | 1.63E−15 | − 9.17 | 1.39E−14 | Selamat lung | |
| Lung Carcinoid Tumor versus normal | − 13.625 | 6.23E−08 | − 7.866 | 1.18E−07 | Bhattacharjee lung | |
| CXCR5 | Squamous Cell Lung Carcinoma versus normal | − 2.231 | 0.014 | − 2.291 | 0.014 | bhattacharjee lung |
| CXCR7 | Squamous Cell Lung Carcinoma versus normal | 6.403 | 6.46E−05 | 5.292 | 8.45E−05 | Bhattacharjee lung |
| Squamous Cell Lung Carcinoma versus normal | 5.437 | 0.002 | 4.087 | 0.002429 | Wachi lung | |
| Squamous Cell Lung Carcinoma versus normal | 3.181 | 0.002 | 3.456 | 0.002267 | Garber lung | |
| Lung Adenocarcinoma versus normal | − 2.587 | 1.31E−12 | − 8.2 | 4.45E−12 | Selamat lung | |
| Lung Adenocarcinoma versus normal | − 2.1 | 1.70E−08 | − 7.304 | 4.13E−08 | Okayama lung |
Fig. 2MRNA expressions of CXCR family members in patients with LUAD and normal lung tissues. The mRNA expressions of different CXCR family members were significantly regulated in patients with LUAD from the TCGA database (*P < 0.05, **P < 0.01, ***P < 0.001.)
Fig. 3Protein expressions of CXCR family members in patients with NSCLC and normal lung tissues. Compared to normal samples protein expressions of CXCR1, CXCR3 and CXCR5 were significantly down-regulated and the protein expressions of CXCR7 was up-regulated
Fig. 4Function enrichment of CXCRs family members. A Network of CXCRs and their 20 related genes was analyzed. B Cellular component; C Biological processes; D Molecular functions; E KEGG pathway analysis
The mRNA expression of CXCR family members was significantly related to the immune infiltration level in LUAD
| Variable | Partial.cor | FDR | ||
|---|---|---|---|---|
| CXCR1 | Neutrophil | 0.312869173 | 1.98E−12 | 3.59E−12 |
| Macrophage | 0.249274699 | 2.64E−08 | 4.46E−08 | |
| Purity | − 0.17824121 | 0.0000679 | 0.000100821 | |
| CD8 + T cell | 0.174818215 | 0.000105366 | 0.000147512 | |
| Dendritic cell | 0.130815254 | 0.003793499 | 0.004533694 | |
| CD4 + T cell | 0.015004873 | 0.741949968 | 0.757407259 | |
| B Cell | 0.001784853 | 0.968758625 | 0.968758625 | |
| CXCR2 | Neutrophil | 0.401796767 | 3.65E−20 | 9.40607E−20 |
| Macrophage | 0.362872692 | 1.53E−16 | 3.13212E−16 | |
| Dendritic cell | 0.359210442 | 2.62E−16 | 5.12873E−16 | |
| Purity | − 0.24072146 | 6.07E−08 | 9.60138E−08 | |
| B Cell | 0.175763794 | 0.000101446 | 0.000146202 | |
| CD4 + T cell | 0.167192614 | 0.00022009 | 0.000299567 | |
| CD8 + T cell | 0.166146667 | 0.000230738 | 0.000305572 | |
| CXCR3 | CD4 + T cell | 0.616363368 | 5.64E−52 | 6.91312E−51 |
| B Cell | 0.552889075 | 4.27E−40 | 4.18497E−39 | |
| Dendritic cell | 0.509673127 | 1.27E−33 | 8.91821E−33 | |
| Purity | − 0.43192631 | 7.19E−24 | 2.20133E−23 | |
| Neutrophil | 0.415634552 | 1.35E−21 | 3.66463E−21 | |
| CD8 + T cell | 0.390159307 | 3.72E−19 | 8.68728E−19 | |
| Macrophage | 0.151872771 | 0.000792204 | 0.000995333 | |
| CXCR4 | Neutrophil | 0.493085431 | 5.88E−31 | 2.87961E−30 |
| CD8 + T cell | 0.453227131 | 4.82E−26 | 1.81743E−25 | |
| Dendritic cell | 0.44949262 | 1.21E−25 | 4.23868E−25 | |
| Purity | − 0.43502367 | 3.16E−24 | 1.03374E−23 | |
| B Cell | 0.435695062 | 7.66E−24 | 2.20717E−23 | |
| cd4 + t cell | 0.378304775 | 6.48E−18 | 1.38037E−17 | |
| Macrophage | 0.342264407 | 8.94E−15 | 1.68419E−14 | |
| CXCR5 | B Cell | 0.686994134 | 7.67E−69 | 3.75798E−67 |
| CD4 + T cell | 0.619713613 | 1.12E−52 | 1.82373E−51 | |
| Purity | − 0.50532384 | 2.24E−33 | 1.36985E−32 | |
| Dendritic cell | 0.380243706 | 3.11E−18 | 6.91733E−18 | |
| Neutrophil | 0.312228712 | 2.21E−12 | 3.87109E−12 | |
| CD8 + T cell | 0.222945521 | 6.69E−07 | 1.02509E−06 | |
| Macrophage | 0.085788423 | 0.059039297 | 0.067277338 | |
| CXCR6 | CD8 + T cell | 0.665355089 | 1.45E−63 | 3.55571E−62 |
| Neutrophil | 0.54568435 | 7.94E−39 | 6.48232E−38 | |
| Dendritic cell | 0.49958271 | 3.60E−32 | 1.95736E−31 | |
| B Cell | 0.483594828 | 9.78E−30 | 4.35855E−29 | |
| Purity | − 0.47813846 | 1.39E−29 | 5.65979E−29 | |
| CD4 + T cell | 0.394199431 | 1.92E−19 | 4.70594E−19 | |
| Macrophage | 0.243594719 | 5.55E−08 | 9.05999E−08 | |
| CXCR7 | Purity | − 0.15337305 | 0.00062504 | 0.000805973 |
| Neutrophil | 0.14448762 | 0.001452866 | 0.001779761 | |
| CD4 + T cell | 0.117935319 | 0.009405926 | 0.01097358 | |
| B Cell | 0.081301054 | 0.073944372 | 0.082347142 | |
| Macrophage | 0.051428777 | 0.258296354 | 0.28125603 | |
| CD8 + T cell | 0.017849732 | 0.694372443 | 0.739657602 | |
| Dendritic cell | 0.015208289 | 0.737534643 | 0.768919096 |
Fig. 5Association of mRNA expression of CXCRs family members with cancer stages of LUAD patients. The mRNA expression of CXCRs family members in normal people or in LUAD patients in different stages (*P < 0.05; **P < 0.01; ***P < 0.001)
Fig. 6Association of mRNA expression of CXCRs family members with gender of LUAD patients. The mRNA expression of CXCR family members in normal people or in LUAD patients in male or female (*P < 0.05; **P < 0.01; ***P < 0.001)
Fig. 7Association of mRNA expression of CXCR family members with cancer subtype of LUAD patients. The mRNA expression of CXCR family members in normal people or in LUAD patients in different subtype (*P < 0.05; **P < 0.01; ***P < 0.001)
Fig. 8Prognostic value of mRNA expression of CXCR family members in LUAD patients about OS. OS comparing the high and low expression of CXCRs family members in LUAD patients