Literature DB >> 35765300

BAGEL: A BAYESIAN GRAPHICAL MODEL FOR INFERRING DRUG EFFECT LONGITUDINALLY ON DEPRESSION IN PEOPLE WITH HIV.

Yuliang Li1, Yang Ni2, Leah H Rubin3, Amanda B Spence4, Yanxun Xu1.   

Abstract

Access and adherence to antiretroviral therapy (ART) has transformed the face of HIV infection from a fatal to a chronic disease. However, ART is also known for its side effects. Studies have reported that ART is associated with depressive symptomatology. Large-scale HIV clinical databases with individuals' longitudinal depression records, ART medications, and clinical characteristics offer researchers unprecedented opportunities to study the effects of ART drugs on depression over time. We develop BAGEL, a Bayesian graphical model to investigate longitudinal effects of ART drugs on a range of depressive symptoms while adjusting for participants' demographic, behavior, and clinical characteristics, and taking into account the heterogeneous population through a Bayesian nonparametric prior. We evaluate BAGEL through simulation studies. Application to a dataset from the Women's Interagency HIV Study yields interpretable and clinically useful results. BAGEL not only can improve our understanding of ART drugs effects on disparate depression symptoms, but also has clinical utility in guiding informed and effective treatment selection to facilitate precision medicine in HIV.

Entities:  

Keywords:  Bayesian nonparametrics; Depression; Graphical model; Longitudinal cohort study; Precision medicine

Year:  2022        PMID: 35765300      PMCID: PMC9236217          DOI: 10.1214/21-AOAS1492

Source DB:  PubMed          Journal:  Ann Appl Stat        ISSN: 1932-6157            Impact factor:   1.959


  43 in total

1.  Perinatal depressive symptoms in HIV-infected versus HIV-uninfected women: a prospective study from preconception to postpartum.

Authors:  Leah H Rubin; Judith A Cook; Dennis D Grey; Kathleen Weber; Christina Wells; Elizabeth T Golub; Rodney L Wright; Rebecca M Schwartz; Lakshmi Goparaju; Deborah Cohan; Melissa L Wilson; Pauline M Maki
Journal:  J Womens Health (Larchmt)       Date:  2011-07-06       Impact factor: 2.681

2.  Center for Epidemiologic Studies Depression Scale (CES-D) as a screening instrument for depression among community-residing older adults.

Authors:  P M Lewinsohn; J R Seeley; R E Roberts; N B Allen
Journal:  Psychol Aging       Date:  1997-06

3.  Low cerebrospinal fluid concentrations of the nucleotide HIV reverse transcriptase inhibitor, tenofovir.

Authors:  Brookie M Best; Scott L Letendre; Peter Koopmans; Steven S Rossi; David B Clifford; Ann C Collier; Benjamin B Gelman; Christina M Marra; Justin C McArthur; J Allen McCutchan; Susan Morgello; David M Simpson; Edmund V Capparelli; Ronald J Ellis; Igor Grant
Journal:  J Acquir Immune Defic Syndr       Date:  2012-04-01       Impact factor: 3.731

4.  Association Between Depression and Condom Use Differs by Sexual Behavior Group in Patients with HIV.

Authors:  Cristina Brickman; Kathleen J Propert; Chelsea Voytek; David Metzger; Robert Gross
Journal:  AIDS Behav       Date:  2017-06

5.  Mortality, CD4 cell count decline, and depressive symptoms among HIV-seropositive women: longitudinal analysis from the HIV Epidemiology Research Study.

Authors:  J R Ickovics; M E Hamburger; D Vlahov; E E Schoenbaum; P Schuman; R J Boland; J Moore
Journal:  JAMA       Date:  2001-03-21       Impact factor: 56.272

Review 6.  Could antiretroviral neurotoxicity play a role in the pathogenesis of cognitive impairment in treated HIV disease?.

Authors:  Jonathan Underwood; Kevin R Robertson; Alan Winston
Journal:  AIDS       Date:  2015-01-28       Impact factor: 4.177

7.  Tenofovir disoproxil fumarate in nucleoside-resistant HIV-1 infection: a randomized trial.

Authors:  Kathleen Squires; Anton L Pozniak; Gerald Pierone; Corklin R Steinhart; Daniel Berger; Nicholaos C Bellos; Stephen L Becker; Michael Wulfsohn; Michael D Miller; John J Toole; Dion F Coakley; Andrew Cheng
Journal:  Ann Intern Med       Date:  2003-09-02       Impact factor: 25.391

8.  Adverse events of raltegravir and dolutegravir.

Authors:  Luigia Elzi; Stefan Erb; Hansjakob Furrer; Matthias Cavassini; Alexandra Calmy; Pietro Vernazza; Huldrych Günthard; Enos Bernasconi; Manuel Battegay
Journal:  AIDS       Date:  2017-08-24       Impact factor: 4.177

9.  Neural-Tube Defects with Dolutegravir Treatment from the Time of Conception.

Authors:  Rebecca Zash; Joseph Makhema; Roger L Shapiro
Journal:  N Engl J Med       Date:  2018-07-24       Impact factor: 91.245

10.  Astrocyte Senescence and Metabolic Changes in Response to HIV Antiretroviral Therapy Drugs.

Authors:  Justin Cohen; Luca D'Agostino; Joel Wilson; Ferit Tuzer; Claudio Torres
Journal:  Front Aging Neurosci       Date:  2017-08-29       Impact factor: 5.750

View more
  1 in total

1.  BAGEL: A BAYESIAN GRAPHICAL MODEL FOR INFERRING DRUG EFFECT LONGITUDINALLY ON DEPRESSION IN PEOPLE WITH HIV.

Authors:  Yuliang Li; Yang Ni; Leah H Rubin; Amanda B Spence; Yanxun Xu
Journal:  Ann Appl Stat       Date:  2022-03-28       Impact factor: 1.959

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.