Literature DB >> 35764832

Mitochondrial iron transporter (MIT) gene in potato (Solanum tuberosum): comparative bioinformatics, physiological and expression analyses in response to drought and salinity.

Firat Kurt1, Baris Kurt2, Ertugrul Filiz3, Kubra Yildiz4, M Aydın Akbudak5.   

Abstract

Mitochondrial iron transporter (MIT) genes are essential for mitochondrial acquisition/import of iron and vital to proper functioning of mitochondria. Unlike other organisms, research on the MITs in plants is limited. The present study provides comparative bioinformatics assays for the potato MIT gene (StMIT) as well as gene expression analyses. The phylogenetic analyses revealed monocots-dicot divergence in MIT proteins and it was also found clade specific motif diversity. In addition, docking analyses indicated that Asp172 and Gly100 residues to be identified as the closest residues binding to ferrous iron. The percentage of structure overlap of the StMIT 3D protein model with Arabidopsis, maize and rice MIT proteins was found between 80.18% and 85.71%. The transcript analyses exhibited that the expression of StMIT was triggered under drought and salinity stresses. The findings of the present study would provide valuable leads for further studies targeting specifically the MIT gene and generally the plant iron metabolism.
© 2022. The Author(s), under exclusive licence to Springer Nature B.V.

Entities:  

Keywords:  In silico analyses; Iron homeostasis; Mitochondrial carrier family; Mitoferrin

Mesh:

Substances:

Year:  2022        PMID: 35764832     DOI: 10.1007/s10534-022-00411-7

Source DB:  PubMed          Journal:  Biometals        ISSN: 0966-0844            Impact factor:   3.378


  41 in total

1.  Overexpression of the FRO2 ferric chelate reductase confers tolerance to growth on low iron and uncovers posttranscriptional control.

Authors:  Erin L Connolly; Nathan H Campbell; Natasha Grotz; Charis L Prichard; Mary Lou Guerinot
Journal:  Plant Physiol       Date:  2003-10-02       Impact factor: 8.340

Review 2.  Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence.

Authors:  Nikolaj Blom; Thomas Sicheritz-Pontén; Ramneek Gupta; Steen Gammeltoft; Søren Brunak
Journal:  Proteomics       Date:  2004-06       Impact factor: 3.984

3.  Posttranslational Protein Modifications in Plant Metabolism.

Authors:  Giulia Friso; Klaas J van Wijk
Journal:  Plant Physiol       Date:  2015-09-03       Impact factor: 8.340

4.  Effect of an Intrinsically Disordered Plant Stress Protein on the Properties of Water.

Authors:  Luisa A Ferreira; Alicyia Walczyk Mooradally; Boris Zaslavsky; Vladimir N Uversky; Steffen P Graether
Journal:  Biophys J       Date:  2018-09-22       Impact factor: 4.033

5.  Two Fe-superoxide dismutase families respond differently to stress and senescence in legumes.

Authors:  Aaron C Asensio; Miriam Gil-Monreal; Laura Pires; Yolanda Gogorcena; Pedro María Aparicio-Tejo; Jose Fernando Moran
Journal:  J Plant Physiol       Date:  2012-07-26       Impact factor: 3.549

6.  Deletion of the mitochondrial carrier genes MRS3 and MRS4 suppresses mitochondrial iron accumulation in a yeast frataxin-deficient strain.

Authors:  Francoise Foury; Tiziana Roganti
Journal:  J Biol Chem       Date:  2002-05-02       Impact factor: 5.157

Review 7.  Metal movement within the plant: contribution of nicotianamine and yellow stripe 1-like transporters.

Authors:  Catherine Curie; Gaëlle Cassin; Daniel Couch; Fanchon Divol; Kyoko Higuchi; Marie Le Jean; Julie Misson; Adam Schikora; Pierre Czernic; Stéphane Mari
Journal:  Ann Bot       Date:  2008-10-31       Impact factor: 4.357

8.  Avogadro: an advanced semantic chemical editor, visualization, and analysis platform.

Authors:  Marcus D Hanwell; Donald E Curtis; David C Lonie; Tim Vandermeersch; Eva Zurek; Geoffrey R Hutchison
Journal:  J Cheminform       Date:  2012-08-13       Impact factor: 5.514

9.  Sodium hydrosulfide induces systemic thermotolerance to strawberry plants through transcriptional regulation of heat shock proteins and aquaporin.

Authors:  Anastasis Christou; Panagiota Filippou; George A Manganaris; Vasileios Fotopoulos
Journal:  BMC Plant Biol       Date:  2014-02-05       Impact factor: 4.215

10.  The Pfam protein families database in 2019.

Authors:  Sara El-Gebali; Jaina Mistry; Alex Bateman; Sean R Eddy; Aurélien Luciani; Simon C Potter; Matloob Qureshi; Lorna J Richardson; Gustavo A Salazar; Alfredo Smart; Erik L L Sonnhammer; Layla Hirsh; Lisanna Paladin; Damiano Piovesan; Silvio C E Tosatto; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2019-01-08       Impact factor: 16.971

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