Literature DB >> 26338952

Posttranslational Protein Modifications in Plant Metabolism.

Giulia Friso1, Klaas J van Wijk2.   

Abstract

Posttranslational modifications (PTMs) of proteins greatly expand proteome diversity, increase functionality, and allow for rapid responses, all at relatively low costs for the cell. PTMs play key roles in plants through their impact on signaling, gene expression, protein stability and interactions, and enzyme kinetics. Following a brief discussion of the experimental and bioinformatics challenges of PTM identification, localization, and quantification (occupancy), a concise overview is provided of the major PTMs and their (potential) functional consequences in plants, with emphasis on plant metabolism. Classic examples that illustrate the regulation of plant metabolic enzymes and pathways by PTMs and their cross talk are summarized. Recent large-scale proteomics studies mapped many PTMs to a wide range of metabolic functions. Unraveling of the PTM code, i.e. a predictive understanding of the (combinatorial) consequences of PTMs, is needed to convert this growing wealth of data into an understanding of plant metabolic regulation.
© 2015 American Society of Plant Biologists. All Rights Reserved.

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Year:  2015        PMID: 26338952      PMCID: PMC4634103          DOI: 10.1104/pp.15.01378

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  205 in total

Review 1.  Numerous posttranslational modifications provide opportunities for the intricate regulation of metabolic enzymes at multiple levels.

Authors:  Steven C Huber; Shane C Hardin
Journal:  Curr Opin Plant Biol       Date:  2004-06       Impact factor: 7.834

Review 2.  Modification site localization scoring: strategies and performance.

Authors:  Robert J Chalkley; Karl R Clauser
Journal:  Mol Cell Proteomics       Date:  2012-02-11       Impact factor: 5.911

Review 3.  Protein phosphorylation and photorespiration.

Authors:  M Hodges; M Jossier; E Boex-Fontvieille; G Tcherkez
Journal:  Plant Biol (Stuttg)       Date:  2013-03-18       Impact factor: 3.081

Review 4.  Analysis of protein carbonylation--pitfalls and promise in commonly used methods.

Authors:  A Rogowska-Wrzesinska; K Wojdyla; O Nedić; C P Baron; H R Griffiths
Journal:  Free Radic Res       Date:  2014-08-11

Review 5.  A survey of computational methods and error rate estimation procedures for peptide and protein identification in shotgun proteomics.

Authors:  Alexey I Nesvizhskii
Journal:  J Proteomics       Date:  2010-09-08       Impact factor: 4.044

6.  Photosynthetic performance of an Arabidopsis mutant with elevated stomatal density (sdd1-1) under different light regimes.

Authors:  Urte Schlüter; Michael Muschak; Dieter Berger; Thomas Altmann
Journal:  J Exp Bot       Date:  2003-02       Impact factor: 6.992

7.  Protein repair L-isoaspartyl methyltransferase 1 is involved in both seed longevity and germination vigor in Arabidopsis.

Authors:  Laurent Ogé; Gildas Bourdais; Jérôme Bove; Boris Collet; Béatrice Godin; Fabienne Granier; Jean-Pierre Boutin; Dominique Job; Marc Jullien; Philippe Grappin
Journal:  Plant Cell       Date:  2008-11-14       Impact factor: 11.277

Review 8.  Nitric oxide (NO) and phytohormones crosstalk during early plant development.

Authors:  Luis Sanz; Pablo Albertos; Isabel Mateos; Inmaculada Sánchez-Vicente; Tamara Lechón; María Fernández-Marcos; Oscar Lorenzo
Journal:  J Exp Bot       Date:  2015-05       Impact factor: 6.992

Review 9.  Identification and interrogation of combinatorial histone modifications.

Authors:  Kelly R Karch; Jamie E Denizio; Ben E Black; Benjamin A Garcia
Journal:  Front Genet       Date:  2013-12-20       Impact factor: 4.599

10.  Cross-talk of nitric oxide and reactive oxygen species in plant programed cell death.

Authors:  Yiqin Wang; Gary J Loake; Chengcai Chu
Journal:  Front Plant Sci       Date:  2013-08-16       Impact factor: 5.753

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  50 in total

1.  Focus Issue on Metabolism: Metabolites, Metabolites Everywhere.

Authors:  Alisdair R Fernie; Eran Pichersky
Journal:  Plant Physiol       Date:  2015-11       Impact factor: 8.340

2.  Detection of SUMOylated Phytochromes in Plants.

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3.  Casein Kinase 1 Regulates Cytorhabdovirus Replication and Transcription by Phosphorylating a Phosphoprotein Serine-Rich Motif.

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Journal:  Plant Cell       Date:  2020-07-08       Impact factor: 11.277

Review 4.  The Plastid and Mitochondrial Peptidase Network in Arabidopsis thaliana: A Foundation for Testing Genetic Interactions and Functions in Organellar Proteostasis.

Authors:  Kristina Majsec; Nazmul H Bhuiyan; Qi Sun; Sunita Kumari; Vivek Kumar; Doreen Ware; Klaas J van Wijk
Journal:  Plant Cell       Date:  2017-09-25       Impact factor: 11.277

Review 5.  G protein subunit phosphorylation as a regulatory mechanism in heterotrimeric G protein signaling in mammals, yeast, and plants.

Authors:  David Chakravorty; Sarah M Assmann
Journal:  Biochem J       Date:  2018-11-09       Impact factor: 3.857

6.  Discovering Lipid Droplet Proteins: From Seeds to Seedlings.

Authors:  Lynn G L Richardson
Journal:  Plant Physiol       Date:  2020-03       Impact factor: 8.340

7.  Strigolactone elevates ethylene biosynthesis in etiolated Arabidopsis seedlings.

Authors:  Han Yong Lee; Gyeong Mee Yoon
Journal:  Plant Signal Behav       Date:  2020-08-23

8.  Sugar signaling regulation by arabidopsis SIZ1-driven sumoylation is independent of salicylic acid.

Authors:  Pedro Humberto Castro; Nuno Verde; Rui Manuel Tavares; Eduardo Rodríguez Bejarano; Herlânder Azevedo
Journal:  Plant Signal Behav       Date:  2018-04-16

9.  Ubiquitylome analysis reveals the involvement of ubiquitination in the bast fiber growth of ramie.

Authors:  Qiaoyun He; Zheng Zeng; Fu Li; Renyan Huang; Yanzhou Wang; Touming Liu
Journal:  Planta       Date:  2021-06-03       Impact factor: 4.116

10.  Genome-wide discovery of OsHOX24-binding sites and regulation of desiccation stress response in rice.

Authors:  Annapurna Bhattacharjee; Prabhakar Lal Srivastava; Onkar Nath; Mukesh Jain
Journal:  Plant Mol Biol       Date:  2020-10-06       Impact factor: 4.076

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