| Literature DB >> 35737867 |
Stijn Denissen1,2, Denis Alexander Engemann3,4, Alexander De Cock1, Lars Costers1,2, Johan Baijot1, Jorne Laton1,5, Iris-Katharina Penner6,7, Matthias Grothe8, Michael Kirsch9, Marie Beatrice D'hooghe10,11, Miguel D'Haeseleer10, Dominique Dive12, Johan De Mey13, Jeroen Van Schependom1,14, Diana Maria Sima1,2, Guy Nagels1,2,15.
Abstract
BACKGROUND ANDEntities:
Keywords: biomarkers; brain age; cognition; machine learning; magnetic resonance imaging; multiple sclerosis
Mesh:
Substances:
Year: 2022 PMID: 35737867 PMCID: PMC9541923 DOI: 10.1111/ene.15473
Source DB: PubMed Journal: Eur J Neurol ISSN: 1351-5101 Impact factor: 6.288
FIGURE 1Brain age pipeline. The pipeline is subdivided into (a) a training phase and (b) a testing phase, where ‘Train Data’ refers to the HC_train data and ‘Test Data’ represents either the HC_test dataset or the MS_test dataset. A silo‐like shape represents a dataset, whereas green diamonds represent some kind of operation, specified by the text. Other text represents either variables or images [Color figure can be viewed at wileyonlinelibrary.com]
Data characteristics
| Dataset | HC_train | HC_test | MS_test | ||
|---|---|---|---|---|---|
| Source | Public | Brussels | Brussels | Greifswald | Total |
| Data description | |||||
|
| 1673 | 50 | 97 | 104 | 201 |
| Age | |||||
| Mean ± SD | 41.9 ± 19.5 | 48.0 ± 11.9 | 48.1 ± 9.6 | 43.1 ± 12.0 | 45.5 ± 11.2 |
| Range (min–max) | 18–94 | 26–68 | 26–70 | 20–69 | 20–70 |
| Gender (M:F) | 673:1000 | 19:31 | 29:68 | 35:69 | 64:137 |
| EDSS (median; IQR) | – | – | 3.0; 2.0 | 1.5; 2.0 | 2.5; 2.5 |
| Disease duration (years) | – | – | 15.7 ± 8.4 | 8.4 ± 6.2 | 11.9 ± 8.2 |
| MS subtype | – | – |
CIS: 2 RRMS: 82 SPMS: 6 PPMS: 7 |
CIS: 0 RRMS: 100 SPMS: 1 PPMS: 3 |
CIS: 2 RRMS: 182 SPMS: 7 PPMS: 10 |
| SDMT (mean ± SD) | – | 53.8 ± 9.6 | 48.0 ± 11.4 | 51.2 ± 15.0 | 49.6 ± 13.5 |
| Scanner description | |||||
| Field strength (T) | 1.5 and 3 | 3 | 3 | 3 | 3 |
| Sequences | T1 | T1 + FLAIR | T1 + FLAIR | T1 + FLAIR | T1 + FLAIR |
| Scanner | Various |
Philips Ingenia: 36 Philips Achieva: 14 |
Philips Ingenia: 68 Philips Achieva: 29 | Siemens Verio |
Philips Ingenia: 68 Philips Achieva: 29 Siemens Verio: 104 |
Abbreviations: CIS, clinically isolated syndrome; EDSS, Expanded Disability Status Scale; F, female; FLAIR, fluid attenuated inversion recovery; IQR, interquartile range; M, male; MS, multiple sclerosis; PPMS, primary progressive MS; RRMS, relapsing–remitting MS; SDMT, Symbol Digit Modalities Test; SPMS, secondary progressive MS.
Refer to Table S1 for more details.
Values displayed as integer ages (rounded down).
The final brain age model's characteristics
| Feature | Weight | Standard Error |
|
|
|---|---|---|---|---|
| Intercept | 41.8867 | 0.216 | 193.509 | <0.001 |
| Grey matter | −7.5859 | 1.021 | −7.427 | <0.001 |
| White matter | −0.8746 | 0.269 | −3.252 | 0.001 |
| Lateral ventricles | 2.2432 | 0.359 | 6.244 | <0.001 |
| Cortical grey matter—frontal lobe | −4.0462 | 0.628 | −6.438 | <0.001 |
| Cortical grey matter—occipital lobe | 0.4299 | 0.314 | 1.370 | 0.171 |
| Cortical grey matter—temporal lobe | −1.0626 | 0.403 | −2.638 | 0.008 |
| Cortical grey matter—parietal lobe | −1.0037 | 0.424 | −2.366 | 0.018 |
| Hippocampus—left | 0.2280 | 0.304 | 0.750 | 0.453 |
| Hippocampus—right | 1.4228 | 0.311 | 4.573 | <0.001 |
| Thalamus—left | −2.1227 | 0.526 | −4.036 | <0.001 |
| Thalamus—right | −2.5859 | 0.511 | −5.057 | <0.001 |
| Sex | −3.4668 | 0.229 | −15.136 | <0.001 |
Outputs from the brain age pipeline: corrected brain age and BPAD for the HC_train, HC_test and MS_test datasets
| Dataset | HC_train | HC_test | MS_test | ||
|---|---|---|---|---|---|
| Source | Public | Brussels | Brussels | Greifswald | Total |
|
| 1673 | 50 | 97 | 104 | 201 |
| Brain age (mean ± SD) | 41.9 ± 21.9† | 46.1 ± 16.8 | 61.8 ± 16.6 | 62.6 ± 22.9 | 62.2 ± 20.1 |
| BPAD (mean ± SD) | 0 ± 10.0† | −1.9 ± 9.7 | 13.7 ± 14.7 | 19.5 ± 16.0 | 16.7 ± 15.6 |
Note: The dagger (†) indicates that these values were obtained by means of 10‐fold cross‐validation.
Abbreviation: BPAD, brain‐predicted age difference.
FIGURE 2Group comparison between HC_test (blue) and MS_test (orange) for brain age, BPAD and chronological age. Left: The raincloud plots show the distribution of brain age, BPAD and chronological age for MS_test and HC_test. A reference line at x = 0 is included as visual aid. Right: The scatterplot shows the relationship between brain age and chronological age for MS_test and HC_test. The dotted line is added as reference, namely where brain age = chronological age [Color figure can be viewed at wileyonlinelibrary.com]
FIGURE 3Scatterplot between brain age and SDMT in the MS_test dataset. The textbox describes the Pearson r statistic, along with the p value [Color figure can be viewed at wileyonlinelibrary.com]
FIGURE 4The relationship between brain age and SDMT, independent of chronological age. Left: Scatterplot between BPAD and SDMT in the MS_test dataset. The textbox describes the Pearson r statistic, along with the p value. Right: Forest plot visualizing the significance of the weights (β ) in the linear regression equation in the MS_test dataset (note that variables were normalized with respect to mean and standard deviation before input in the regression equation). The maximum likelihood estimates of the weights () are represented by the orange squares, along with a 95% confidence interval (horizontal bar). If the latter does not include 0, the contribution of that feature to the model is considered significant. Brain age and chronological age contributed significantly (p = 0.002 and p < 0.001 respectively) [Color figure can be viewed at wileyonlinelibrary.com]
FIGURE 5Scatterplot between the first principal component (PC1) and brain age in the MS_test dataset. The textbox describes the Pearson r statistic, along with the p value [Color figure can be viewed at wileyonlinelibrary.com]