| Literature DB >> 35730194 |
Fan Guo1, Wei-Na Kong1, De-Wei Li2, Gang Zhao3, Hui-Li Wu1, Miyessar Anwar1, Xiao-Qian Shang1, Qian-Nan Sun1, Cai-Ling Ma4, Xiu-Min Ma1.
Abstract
Objectives: Research on the role of mast cells (MCs) in cervical tumor immunity is more limited. Therefore, our study aimed to evaluate the prognostic value of MCs and their correlation with the immune microenvironment of cervical carcinoma (CC).Entities:
Keywords: CIBERSORT; cervical carcinoma; mast cell; prognosis; tumor microenvironment
Mesh:
Substances:
Year: 2022 PMID: 35730194 PMCID: PMC9228650 DOI: 10.1177/15330338221106530
Source DB: PubMed Journal: Technol Cancer Res Treat ISSN: 1533-0338
Figure 1.Kaplan-Meier analysis of overall survival in patients with cervical carcinoma. The results showed that the high tumor-infiltrating MCD group was associated with a worse prognosis for the patients. TCGA cohort (n = 222, P = .0003) (A). Clinical patient cohort (n = 43, P = .0475) (B).
Clinical Characteristics of 43 Patients With Cervical Carcinoma.
| Parameter | |
|---|---|
| Total number of patients enrolled | 43 |
| Age at first diagnosis (years) | |
| ≤58 | 32 (74.4%) |
| >58 | 11 (25.6%) |
| Ethnicity | |
| Han | 24 (55.8%) |
| Others | 19 (44.2%) |
| Differentiation | |
| Poor | 9 (20.9%) |
| Middle/High | 34 (79.1%) |
| Tumor size | |
| ≤ 4 cm | 31 (72.1%) |
| > 4 cm | 12 (27.9%) |
| Lymph node metastasis | |
| No | 31 (72.1%) |
| Yes | 12 (27.9%) |
| FIGO stage | |
| IA ∼ IIA2 | 37 (86.0%) |
| ≥ IIB | 6 (14.0%) |
| MCD | |
| Low | 31 (72.1%) |
| High | 12 (27.9%) |
Figure 2.Representative images of tryptase+ mast cells staining in cervical carcinoma. Mast cells were dispersed in tumor tissues at different densities. Cervical carcinoma tissues with high mast cell infiltration were presented in 200× (A), 400× (B). Cervical carcinoma tissues with low mast cell infiltration were shown in 200× (C), 400× (D).
Figure 3.Relationship between mast cell density and clinical features. Except for age (P = .008), other clinical variables were not related to the expression of mast cells in cervical carcinoma tissue.
The Common DEGs Included 278 Upregulated and 27 Downregulated Genes.
| DEGs | Genes |
|---|---|
| Upregulated | TTR, PON1, TSPAN8, UGT2B11, ITIH1, UBE2U, SPATA21, SLC22A7, CEACAM16, ANKFN1, PAX2, PLA2G2A, CFHR4, DMRTB1, CSAG2, SST, FOLR1, SOX1, HS3ST4, CSAG3, NTS, CDH12, MT4, ADH1C, HTR2C, PIGR, AADACL2, FRRS1L, GPR12, UGT2B4, ALB, ZBBX, SLC18A3, PCDHGB1, RPRM, MAGEA6, C5orf49, CTAG2, KLHL34, FABP1, SPINK13, KRT24, DYNAP, PPP1R14D, INSL6, ORM2, ITLN1, GJB1, MRGPRE, PRAP1, KRT77, MAGEA10, IGFALS, KRT3, FGA, NTSR2, SCGB1D2, GNAT3, HSD3B1, CLEC2L, MAGEA12, AR, SRARP, CCKBR, SULT1C2, PRSS56, APOH, TRIM43, KCNJ18, FAM69C, TCEAL2, FAM228A, KLHL14, ELF5, CCL15, PIWIL2, CNGA3, USH1C, DRGX, NMUR1, ODAM, MAATS1, SIGLEC8, AMBN, CYP2F1, KNG1, PMP2, PENK, ALPI, TCHH, NOL4, KIR3DL2, C4BPB, ZIC1, KRTAP3-1, COL9A1, B3GAT1, UPK1B, SCGB2A2, CRISP2, BRINP2, FOXI2, TMEM72, WFDC6, CD8B, SERPINI2, ECEL1, GSTA3, MUC5B, SLC6A20, SERPINB12, SLC6A19, EPS8L3, DIRAS2, PTH2R, TLX1, ASTN1, IGF1, STATH, CSAG1, FDCSP, F11, OTC, SNTN, MAGEA3, SLCO1B1, FXYD4, PIWIL1, DPP10, MYH6, CRABP1, PRAC2, DEFA5, MTRNR2L1, SCUBE1, C20orf85, GPR50, MKRN3, DEFA6, HAND1, APOA5, KCNJ16, BMP5, TOX3, FABP4, INSL4, GABRG3, LHFPL4, XAGE2, TKTL1, AL583836.1, CCDC33, MAGEC2, ANKS4B, CHAT, CGA, C4BPA, TESC, NOBOX, SMIM31, OTX2, SYT5, FGF4, UGT2A1, LYPD8, CLDN8, SLC7A3, MUC5AC, CCDC190, C10orf82, ORM1, PAH, EDN3, ZNF492, CDX2, CTNND2, SLCO1A2, MOGAT2, C6, PLA2G2D, HSPB3, C19orf81, KCNB2, CXorf67, SPATA19, C6orf10, GMNC, CALCA, PCK1, MUC6, GC, STXBP6, CYP2C9, LRRC3B, AQP4, MAPK4, SYCE1, MAGEB2, PPP1R1B, GATA4, VIPR2, MIA, SLCO1B3, FAM216B, SOX14, HEPACAM2, PKDCC, CD8B2, ALDH1A1, HGD, TCERG1L, HMX1, AFM, POU6F2, MYOD1, EPHA7, MORN5, UGT1A9, TRIM72, CAPN8, SH3GL2, LIX1, KRT28, SLC28A2, MAGEC1, NRAP, UGT1A10, C7orf77, ASCL1, PCP4, HS3ST5, ALPP, KRT2, LRRTM1, SLITRK5, SYT4, PNLIPRP3, DACH2, SULT2A1, CA8, KIF1A, ETNPPL, PLD5, VIL1, KRT79, SHH, SAGE1, FAM81B, UGT2A3, RNF182, PCDHB2, TMEM179, MUC13, SCGB2A1, DDIT4L, APOA2, SLC9C2, PAK5, RNF186, REG1A, SERPINA4, TRIM71, CHRND, CCDC198, STAC2, TCF23, MAGEB17, DRC1, OR3A2, KCNK9, KRT36, MAGEA1, OR7D2, TCHHL1, CFTR, TMEM229A, CST5, FOXN4 |
| Downregulated | OR2T8, CCL20, HMGA2, IL1A, SLITRK6, CSF2, NXPH2, LRRN4, KRTAP2-3, NKX2-2, IL1B, FAM163A, PLPPR5, MMP3, PDPN, PSG6, FAM71A, MMP10, NPY, HRH2, HAS2, FGF5, TFPI2, CXCL8, CGB8, CDH4, MMP1 |
Figure 4.Differentially expressed genes analysis of TCGA data. 305 DEGs were obtained in total, of which 278 genes were up-regulated and 27 genes were down-regulated. Volcano graph (A). A heat map of the top 50 DEGs (B).
Figure 5.Complex and modular analysis of protein–protein interaction network for DEGs. 305 DEGs were filtered into the protein–protein interaction network and visualized by Cytoscape (A). The top 2 protein–protein interaction networks were analyzed in MCODE (B–C).
Results for 7 Key Gene Clusters.
| Cluster | Score (Density*#Nodes) | Nodes | Edges | Node IDs |
|---|---|---|---|---|
| 1 | 6.167 | 13 | 37 | IL1B, ORM1, TTR, IL1A, CCL20, APOH, ALB, APOA2, FGA, ORM2, CXCL8, CSF2, FABP1 |
| 2 | 4 | 4 | 6 | MUC6, MUC5B, MUC13, MUC5AC |
| 3 | 4 | 4 | 6 | MAGEA6, CSAG1, MAGEA12, MAGEA3 |
| 4 | 4 | 4 | 6 | NTS, CALCA, NPY, SST |
| 5 | 3 | 3 | 3 | MAGEC2, MAGEC1, SAGE1 |
| 6 | 3 | 3 | 3 | MYH6, GATA4, MYOD1 |
| 7 | 3 | 3 | 3 | CGB8, CGA, CGB5 |
Enrichment Analysis of the Top 2 MCODE Genes Function.
| MCODE | GO | Description | Log10 ( |
|---|---|---|---|
| MCODE-1 | GO:0002576 | Platelet degranulation | 6.36 × 10−07 |
| MCODE-1 | GO:0006954 | Inflammatory response | 1.10 × 10−04 |
| MCODE-1 | GO:0006955 | Immune response | 1.64 × 10−04 |
| MCODE-1 | GO:2001240 | Negative regulation of extrinsic apoptotic signaling pathway in absence of ligand | 3.07 × 10−04 |
| MCODE-1 | GO:0030593 | Neutrophil chemotaxis | 9.80 × 10−04 |
| MCODE-2 | GO:0016266 | O-glycan processing | 4.34 × 10−08 |
| MCODE-2 | GO:0030277 | Maintenance of gastrointestinal epithelium | 2.14 × 10−03 |
Figure 6.Correlation between mast cells and the top 2 gene enrichment modules. Mast cells were significantly correlated with CXCL8, IL1A, IL1B, CSF2, and CCL20. Comparison between the first 2 gene enrichment modules (A). Correlation analysis between mast cells and genes or among genes. The circles shown in the figure were all statistically significant, while the nonstatistically significant correlations were hidden. The values in the circles represented correlation coefficients (B).