Literature DB >> 35726230

One-Sided Multidimensional Statistical Significance Testing: A New Method of Calculating the Statistical Significance of Spectra Used to Demonstrate Magnetic Nanoparticle Sensitivity.

John B Weaver1, Claire V Weaver2, Dylan B Ness3, Scott W Gordon-Wylie4, Eugene Demidenko5.   

Abstract

Estimating statistical significance of the difference between two spectra or series is a fundamental statistical problem. Multivariate significance tests exist but the limitations preclude their use in many common cases; e.g., one-sided testing, unequal variance and when few repetitions are acquired all of which are required in magnetic spectroscopy of nanoparticle Brownian motion (MSB). We introduce a test, termed the T-S test, that is powerful and exact (exact type I error). It is flexible enough to be one- or two-sided and the one-sided version can specify arbitrary regions where each spectrum should be larger. The T-S test takes the-one or two-sided p-value at each frequency and combines them using Stouffer's method. We evaluated it using simulated spectra and measured MSB spectra. For the single-sided version, mean of the spectrum, A-T, was used as a reference; the T-S test is as powerful when the variance at each frequency is uniform and outperforms when the noise power is not uniform. For the two-sided version, the Hotelling T2 two-sided multivariate test was used as a reference; the two-sided T-S test is only slightly less powerful for large numbers of repetitions and outperforms rather dramatically for small numbers of repetitions. The T-S test was used to estimate the sensitivity of our current MSB spectrometer showing 1 nanogram sensitivity. Using eight repetitions the T-S test allowed 15 pM concentrations of mouse IL-6 to be identified while the mean of the spectra only identified 76 pM.

Entities:  

Keywords:  Multivariate statistical significance testing; One-sided statistical significance testing

Year:  2022        PMID: 35726230      PMCID: PMC9206232          DOI: 10.1088/1361-6463/ac7012

Source DB:  PubMed          Journal:  J Phys D Appl Phys        ISSN: 0022-3727            Impact factor:   3.409


  12 in total

1.  Combining probability from independent tests: the weighted Z-method is superior to Fisher's approach.

Authors:  M C Whitlock
Journal:  J Evol Biol       Date:  2005-09       Impact factor: 2.411

2.  Measurement of magnetic nanoparticle relaxation time.

Authors:  John B Weaver; Esra Kuehlert
Journal:  Med Phys       Date:  2012-05       Impact factor: 4.071

3.  Magnetic spectroscopy of nanoparticle Brownian motion measurement of microenvironment matrix rigidity.

Authors:  John B Weaver; Kristen M Rauwerdink; Adam M Rauwerdink; Irina M Perreard
Journal:  Biomed Tech (Berl)       Date:  2013-12       Impact factor: 1.411

4.  Magnetic nanoparticle temperature estimation.

Authors:  John B Weaver; Adam M Rauwerdink; Eric W Hansen
Journal:  Med Phys       Date:  2009-05       Impact factor: 4.071

5.  Combining evidence using p-values: application to sequence homology searches.

Authors:  T L Bailey; M Gribskov
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

6.  Magnetic nanoparticle sensing: decoupling the magnetization from the excitation field.

Authors:  Daniel B Reeves; John B Weaver
Journal:  J Phys D Appl Phys       Date:  2014       Impact factor: 3.207

7.  Quantification of magnetic nanoparticles by compensating for multiple environment changes simultaneously.

Authors:  Yipeng Shi; Dhrubo Jyoti; Scott W Gordon-Wylie; John B Weaver
Journal:  Nanoscale       Date:  2019-12-06       Impact factor: 7.790

8.  Temperature of the magnetic nanoparticle microenvironment: estimation from relaxation times.

Authors:  I M Perreard; D B Reeves; X Zhang; E Kuehlert; E R Forauer; J B Weaver
Journal:  Phys Med Biol       Date:  2014-02-20       Impact factor: 3.609

9.  Molecular sensing with magnetic nanoparticles using magnetic spectroscopy of nanoparticle Brownian motion.

Authors:  Xiaojuan Zhang; Daniel B Reeves; Irina M Perreard; Warren C Kett; Karl E Griswold; Barjor Gimi; John B Weaver
Journal:  Biosens Bioelectron       Date:  2013-07-04       Impact factor: 10.618

10.  Generalized Scaling and the Master Variable for Brownian Magnetic Nanoparticle Dynamics.

Authors:  Daniel B Reeves; Yipeng Shi; John B Weaver
Journal:  PLoS One       Date:  2016-03-09       Impact factor: 3.240

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