Literature DB >> 35721233

diproperm: An R Package for the DiProPerm Test.

Andrew G Allmon1, J S Marron1, Michael G Hudgens1.   

Abstract

High-dimensional low sample size (HDLSS) data sets frequently emerge in many biomedical applications. The direction-projection-permutation (DiProPerm) test is a two-sample hypothesis test for comparing two high-dimensional distributions. The DiProPerm test is exact, i.e., the type I error is guaranteed to be controlled at the nominal level for any sample size, and thus is applicable in the HDLSS setting. This paper discusses the key components of the DiProPerm test, introduces the diproperm R package, and demonstrates the package on a real-world data set.

Entities:  

Year:  2021        PMID: 35721233      PMCID: PMC9202909          DOI: 10.32614/rj-2021-072

Source DB:  PubMed          Journal:  R J        ISSN: 2073-4859            Impact factor:   1.673


  7 in total

1.  A survey of high dimension low sample size asymptotics.

Authors:  Makoto Aoshima; Dan Shen; Haipeng Shen; Kazuyoshi Yata; Yi-Hui Zhou; J S Marron
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2.  Persistent Homology Analysis of Brain Artery Trees.

Authors:  Paul Bendich; J S Marron; Ezra Miller; Alex Pieloch; Sean Skwerer
Journal:  Ann Appl Stat       Date:  2016-03-25       Impact factor: 2.083

3.  Novel statistical methodology reveals that hip shape is associated with incident radiographic hip osteoarthritis among African American women.

Authors:  H An; J S Marron; T A Schwartz; J B Renner; F Liu; J A Lynch; N E Lane; J M Jordan; A E Nelson
Journal:  Osteoarthritis Cartilage       Date:  2015-11-24       Impact factor: 6.576

Review 4.  Promises and challenges for the implementation of computational medical imaging (radiomics) in oncology.

Authors:  E J Limkin; R Sun; L Dercle; E I Zacharaki; C Robert; S Reuzé; A Schernberg; N Paragios; E Deutsch; C Ferté
Journal:  Ann Oncol       Date:  2017-06-01       Impact factor: 32.976

5.  A machine learning approach to knee osteoarthritis phenotyping: data from the FNIH Biomarkers Consortium.

Authors:  A E Nelson; F Fang; L Arbeeva; R J Cleveland; T A Schwartz; L F Callahan; J S Marron; R F Loeser
Journal:  Osteoarthritis Cartilage       Date:  2019-04-16       Impact factor: 6.576

6.  A Beginner's Guide to Analyzing and Visualizing Mass Cytometry Data.

Authors:  Abigail K Kimball; Lauren M Oko; Bonnie L Bullock; Raphael A Nemenoff; Linda F van Dyk; Eric T Clambey
Journal:  J Immunol       Date:  2018-01-01       Impact factor: 5.422

7.  Machine learning approach yields epigenetic biomarkers of food allergy: A novel 13-gene signature to diagnose clinical reactivity.

Authors:  Ayush Alag
Journal:  PLoS One       Date:  2019-06-19       Impact factor: 3.240

  7 in total

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