| Literature DB >> 35718769 |
Monika Sobočan1,2,3, Daniela Brunialti4, Sussanne Sprung4, Christoph Schatz4, Jure Knez5,6, Rajko Kavalar7, Iztok Takač5,6, Johannes Haybaeck4,8.
Abstract
High grade epithelial ovarian cancer (EOC) represents a diagnostic and therapeutic challenge due to its aggressive features and short recurrence free survival (RFS) after primary treatment. Novel targets to inform our understanding of the EOC carcinogenesis in the translational machinery can provide us with independent prognostic markers and provide drugable targets. We have identified candidate eukaryotic initiation factors (eIF) and eukaryotic elongation factors (eEF) in the translational machinery for differential expression in EOC through in-silico analysis. We present the analysis of 150 ovarian tissue microarray (TMA) samples on the expression of the translational markers eIF2α, eIF2G, eIF5 (eIF5A and eIF5B), eIF6 and eEF1A1. All translational markers were differentially expressed among non-neoplastic ovarian samples and tumour samples (borderline tumours and EOC). In EOC, expression of eIF5A was found to be significantly correlated with recurrence free survival (RFS) and expression of eIF2G and eEF1A1 with overall survival (OS). Expression correlation among factor subunits showed that the correlation of eEF1A1, eIF2G, EIF2α and eIF5A were significantly interconnected. eIF5A was also correlated with eIF5B and eIF6. Our study demonstrates that EOCs have different translational profile compared to benign ovarian tissue and that eIF5A is a central dysregulated factor of the translation machinery.Entities:
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Year: 2022 PMID: 35718769 PMCID: PMC9208098 DOI: 10.1186/s13048-022-00998-y
Source DB: PubMed Journal: J Ovarian Res ISSN: 1757-2215 Impact factor: 5.506
Fig. 1Intensity scores for eIF5A
Subunit combined score comparison among borderline tumors (BLTs) and epithelial ovarian cancer (EOC) samples
| BLT subtype | BLT subtype (serous vs. mucinous BLT) mean CS (SD) | BLT subtype (serous vs. mucinous BLT) difference ( | Mean CS (SD) | BLT vs. EOC expression significance | ||
|---|---|---|---|---|---|---|
| eIF5A cancer stroma | EOC ( | / | 3.9 (1.9) | / | 3.9 (1.9) | U = 1077; |
| BLT ( | mucinous | 5.6 (2.1) | .402 | 5.4 (2.5) | ||
| serous | 5.2 (2.0) | |||||
| eIF5A nuclear | EOC ( | / | 10.7 (3.4) | / | 10.7 (3.4) | U = 1506; |
| BLT ( | mucinous | 11.4 (1.8) | .685 | 11.4 (2.2) | ||
| serous | 11.4 (2.7) | |||||
| eIF5A cytoplasm | EOC ( | / | 4.1 (2.6) | / | 4.1 (2.6) | U = 974; |
| BLT ( | mucinous | 5.8 (2.5) | .360 | 6.2 (2.7) | ||
| serous | 6.6 (3.0) | |||||
| eIF5B cancer stroma | EOC ( | / | 2.1 (1.5) | / | 2.1 (1.5) | U = 1023; |
| BLT ( | mucinous | 3.7 (1.7) | .004 | 3.0 (1.6) | ||
| serous | 2.3 (1.2) | |||||
| eIF5B cytoplasm | EOC ( | / | 1.8 (1.9) | / | 1.8 (1.9) | U = 919; |
| BLT ( | mucinous | 4.7 (3.3) | .036 | 3.7 (2.7) | ||
| serous | 2.6 (1.3) | |||||
| eIF6 cancer stroma | EOC ( | / | 2.3 (1.0) | / | 2.3 (1.0) | U = 1142; |
| BLT ( | mucinous | 3.0 (1.1) | .643 | 2.9 (1.1) | ||
| serous | 2.8 (1.1) | |||||
| eIF6 cytoplasm | EOC ( | / | 6.24 (2.7) | / | 6.24 (2.7) | U = 1311; |
| BLT (n = 41) | mucinous | 6.6 (2.6) | .196 | 7.1 (2.7) | ||
| serous | 7.9 (2.7) | |||||
| eIF2G cancer stroma | EOC ( | 3.2 (1.8) | / | 3.2 (1.8) | U = 842; | |
| BLT ( | mucinous | 5.5 (2.1) | .044 | 5.0 (2.2) | ||
| serous | 4.1 (2.0) | |||||
| eIF2G nuclear | EOC ( | 5.9 (2.5) | / | 5.9 (2.5) | U = 1183; | |
| BLT ( | mucinous | 6.1 (2.4) | .013 | 7.3 (3.0) | ||
| serous | 8.5 (3.2) | |||||
| eIF2G cytoplasm | EOC ( | / | 5.7 (2.3) | / | 5.7 (2.3) | U = 1192; |
| BLT ( | mucinous | 6.1 (2.4) | .041 | 7.0 (2.7) | ||
| serous | 7.9 (2.9) | |||||
| eIF2α cytoplasm | EOC ( | / | 9.5 (2.4) | / | 9.5 (2.4) | U = 1608; |
| BLT ( | mucinous | 8.6 (2.4) | .034 | 9.5 (2.3) | ||
| serous | 10.2 (2.0) | |||||
| eIF2α cancer stroma | EOC ( | / | 3.1 (1.1) | / | 3.1 (1.1) | U = 1573; |
| BLT ( | mucinous | 3.3 (0.9) | .102 | 3.1 (3.6) | ||
| serous | 2.7 (1.1) | |||||
| eEF1A1 cytoplasm | EOC ( | / | 9.0 (2.7) | / | 9.0 (2.7) | U = 1546; |
| BLT ( | mucinous | 8.0 (1.8) | .002 | 8.9 (2.1) | ||
| serous | 10.0 (2.0) | |||||
| eEF1A1 cancer stroma | EOC ( | / | 4.3 (3.4) | / | 4.3 (3.4) | U = 1059; |
| BLT ( | mucinous | 7.2 (2.6) | 0.001 | 6.0 (3.0) | ||
| serous | 5.0 (3.6) | |||||
Significance of subunit expression on recurrence free survival (RFS) and overall survival (OS)
| Number of evaluated | CS score (SD) | RFS | OS | ||
|---|---|---|---|---|---|
| eIF6 | eIF6 cytoplasm | 75 | 6.24 (2.7) | U = 640; | U = 600; |
| eIF6 nuclear | 75 | N/A | N/A | N/A | |
| eIF6 normal stroma | 60 | 2.2 (1.0) | U = 372; | U = 278; | |
| eIF6 cancer stroma | 75 | 2.3 (1.0) | U = 648; | U = 599; | |
| eIF5B | eIF5B cytoplasm | 74 | 1.8 (1.9) | U = 597; | U = 566; |
| eIF5B nuclear | 74 | N/A | N/A | N/A | |
| eIF5B normal stroma | 50 | 1.96 (1.3) | U = 236; | U = 228; | |
| eIF5B cancer stroma | 73 | 2.1 (1.5) | U = 483; | U = 536; | |
| eIF5A | eIF5A cytoplasm | 75 | 4.1 (2.6) | U = 531; | U = 469; |
| eIF5A nuclear | 75 | 10.7 (3.4) | U = 546; | U = 503; | |
| eIF5A normal stroma | 57 | 4.3 (1.9) | U = 332; | U = 310; | |
| eIF5A cancer stroma | 74 | 3.9 (1.9) | U = 481; | U = 446; | |
| eIF2G | eIF2G cytoplasm | 75 | 5.7 (2.3) | U = 562; | U = 463; |
| eIF2G nuclear | 75 | 5.9 (2.5) | U = 608; | U = 439; | |
| eIF2G normal stroma | 52 | 4.2 (1.9) | U = 261; | U = 247; | |
| eIF2G cancer stroma | 75 | 3.2 (1.8) | U = 647; | U = 482; | |
| eEF1A1 | eEF1A1 cytoplasm | 75 | 9.0 (2.7) | U = 553; | U = 516; |
| eEF1A1 nuclear | 75 | N/A | N/A | N/A | |
| eEF1A1 normal stroma | 54 | 3.3 (2.7) | U = 308; | U = 278; | |
| eEF1A1 cancer stroma | 72 | 4.3 (3.4) | U = 573; | U = 387; | |
| eIF2α | eIF2α cytoplasm | 75 | 9.5 (2.4) | U = 629; | U = 581; |
| eIF2α nuclear | 75 | N/A | N/A | N/A | |
| eIF2α normal stroma | 66 | 2.8 (1.6) | U = 443; | U = 612; | |
| eIF2α cancer stroma | 75 | 3.1 (1.1) | U = 598; | U = 589; | |
Fig. 2Survival plot of recurrence free survival (RFS) for significant translational subunits
Fig. 3Survival plot of OS in significant translation subunits
Fig. 4Translational subunit associations based on the Spearman rank correlation analysis