Literature DB >> 3191886

The superstructure of chromatin and its condensation mechanism. V. Effect of linker length, condensation by multivalent cations, solubility and electric dichroism properties.

M H Koch1, Z Sayers, A M Michon, R Marquet, C Houssier, J Willführ.   

Abstract

Comparison between the internucleosomal distance found by X-ray solution scattering for chicken erythrocyte (23 nm) and sea urchin (30 nm) chromatin indicates that this distance is proportional to the linker length. The diameter of the condensed sea urchin chromatin fibers is about 45 nm which is significantly larger than in chicken erythrocyte chromatin (35 nm). Trivalent cations (Gd, Tb, Cr) and polyamines spermine and spermidine were found to induce compaction at much lower concentrations than the divalent cations but Gd, Tb, Cr induce aggregation before full compaction of the fibers. The influence of hydrogen bonding is illustrated by comparison of the effects of NaCl, ammonium chlorides on condensation. Solubility experiments indicate that there is a nearly linear dependence of the Mg++ concentration at which precipitation occurs on chromatin concentration and confirm the differences between cations observed by X-ray scattering. The chicken erythrocyte chromatin samples were further characterized by their reduced electric dichroism. The values found are consistent with the model derived from X-ray scattering and are compared with those reported in the literature.

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Year:  1988        PMID: 3191886     DOI: 10.1007/bf00261903

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  35 in total

Review 1.  The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides.

Authors:  G S Manning
Journal:  Q Rev Biophys       Date:  1978-05       Impact factor: 5.318

2.  A triple helix model for the structure of chromatin fiber.

Authors:  V Makarov; S Dimitrov; V Smirnov; I Pashev
Journal:  FEBS Lett       Date:  1985-02-25       Impact factor: 4.124

3.  Interaction and conformational changes of chromatin with divalent ions.

Authors:  N Borochov; J Ausio; H Eisenberg
Journal:  Nucleic Acids Res       Date:  1984-04-11       Impact factor: 16.971

4.  Interaction of chromatin with NaCl and MgCl2. Solubility and binding studies, transition to and characterization of the higher-order structure.

Authors:  J Ausio; N Borochov; D Seger; H Eisenberg
Journal:  J Mol Biol       Date:  1984-08-15       Impact factor: 5.469

5.  The layered organization of nucleosomes in 30 nm chromatin fibers.

Authors:  J A Subirana; S Muñoz-Guerra; J Aymamí; M Radermacher; J Frank
Journal:  Chromosoma       Date:  1985       Impact factor: 4.316

6.  Structure of the 300A chromatin filament: X-ray diffraction from oriented samples.

Authors:  J Widom; A Klug
Journal:  Cell       Date:  1985-11       Impact factor: 41.582

7.  Comparative study of the condensation of chicken erythrocyte and calf thymus chromatins by di- and multivalent cations.

Authors:  R Marquet; P Colson; A M Matton; C Houssier; M Thiry; G Goessens
Journal:  J Biomol Struct Dyn       Date:  1988-02

8.  Chromium-induced cross-linking of nuclear proteins and DNA.

Authors:  A Wedrychowski; W S Ward; W N Schmidt; L S Hnilica
Journal:  J Biol Chem       Date:  1985-06-10       Impact factor: 5.157

9.  Small angle scattering of cell nuclei.

Authors:  H Notbohm
Journal:  Eur Biophys J       Date:  1986       Impact factor: 1.733

10.  Higher-order structure of long repeat chromatin.

Authors:  J Widom; J T Finch; J O Thomas
Journal:  EMBO J       Date:  1985-12-01       Impact factor: 11.598

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  8 in total

1.  The superstructure of chromatin and its condensation mechanism. VI. Electric dichroism and model calculations.

Authors:  M H Koch; Z Sayers; A M Michon; P Sicre; R Marquet; C Houssier
Journal:  Eur Biophys J       Date:  1989       Impact factor: 1.733

2.  Topological constraints on the possible structures of the 30 nm chromatin fibre.

Authors:  D Z Staynov; Y G Proykova
Journal:  Chromosoma       Date:  2007-10-13       Impact factor: 4.316

3.  The diameter of chromatin fibres depends on linker length.

Authors:  C Alegre; J A Subirana
Journal:  Chromosoma       Date:  1989-06       Impact factor: 4.316

4.  Localization of DNA in the condensed interphase chromosomes of Euglena.

Authors:  K Ueda; Y Hayashi-Ishimaru
Journal:  Chromosoma       Date:  1996       Impact factor: 4.316

5.  Small angle x-ray scattering of chromatin. Radius and mass per unit length depend on linker length.

Authors:  S P Williams; J P Langmore
Journal:  Biophys J       Date:  1991-03       Impact factor: 4.033

6.  Polyamines in liver and their influence on chromatin condensation after 17-beta estradiol treatment of Atlantic salmon.

Authors:  S Waters; M Khamis; A von der Decken
Journal:  Mol Cell Biochem       Date:  1992-01-15       Impact factor: 3.396

7.  The diameters of frozen-hydrated chromatin fibers increase with DNA linker length: evidence in support of variable diameter models for chromatin.

Authors:  B D Athey; M F Smith; D A Rankert; S P Williams; J P Langmore
Journal:  J Cell Biol       Date:  1990-09       Impact factor: 10.539

8.  Radial density distribution of chromatin: evidence that chromatin fibers have solid centers.

Authors:  M F Smith; B D Athey; S P Williams; J P Langmore
Journal:  J Cell Biol       Date:  1990-02       Impact factor: 10.539

  8 in total

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