Literature DB >> 35689029

ASLPrep: a platform for processing of arterial spin labeled MRI and quantification of regional brain perfusion.

Azeez Adebimpe1,2, Maxwell Bertolero1,2, Sudipto Dolui3, Matthew Cieslak1,2, Kristin Murtha1,2, Erica B Baller1,2,4, Bradley Boeve5, Adam Boxer6, Ellyn R Butler2, Phil Cook7, Stan Colcombe8,9, Sydney Covitz1,2, Christos Davatzikos10, Diego G Davila1,2, Mark A Elliott3, Matthew W Flounders2,11, Alexandre R Franco8,9, Raquel E Gur2,4, Ruben C Gur2,4, Basma Jaber1,2, Corey McMillian12, Michael Milham8,9, Henk J M M Mutsaerts13, Desmond J Oathes2,11,14, Christopher A Olm12, Jeffrey S Phillips12, Will Tackett3, David R Roalf2,4, Howard Rosen6, Tinashe M Tapera1,2, M Dylan Tisdall3, Dale Zhou1, Oscar Esteban15,16, Russell A Poldrack16, John A Detre3,17, Theodore D Satterthwaite18,19,20.   

Abstract

Arterial spin labeled (ASL) magnetic resonance imaging (MRI) is the primary method for noninvasively measuring regional brain perfusion in humans. We introduce ASLPrep, a suite of software pipelines that ensure the reproducible and generalizable processing of ASL MRI data.
© 2022. The Author(s), under exclusive licence to Springer Nature America, Inc.

Entities:  

Mesh：

Substances：

Year:  2022        PMID： 35689029     DOI： 10.1038/s41592-022-01458-7

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   47.990


  40 in total

Review 1.  The remarkable, yet not extraordinary, human brain as a scaled-up primate brain and its associated cost.

Authors:  Suzana Herculano-Houzel
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-20       Impact factor: 11.205

Review 2.  Software tools for analysis and visualization of fMRI data.

Authors:  R W Cox; J S Hyde
Journal:  NMR Biomed       Date:  1997 Jun-Aug       Impact factor: 4.044

3.  Impact of puberty on the evolution of cerebral perfusion during adolescence.

Authors:  Theodore D Satterthwaite; Russell T Shinohara; Daniel H Wolf; Ryan D Hopson; Mark A Elliott; Simon N Vandekar; Kosha Ruparel; Monica E Calkins; David R Roalf; Efstathios D Gennatas; Chad Jackson; Guray Erus; Karthik Prabhakaran; Christos Davatzikos; John A Detre; Hakon Hakonarson; Ruben C Gur; Raquel E Gur
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-27       Impact factor: 11.205

Review 4.  FreeSurfer.

Authors:  Bruce Fischl
Journal:  Neuroimage       Date:  2012-01-10       Impact factor: 6.556

Review 5.  The Utility of Cerebral Blood Flow as a Biomarker of Preclinical Alzheimer's Disease.

Authors:  Chelsea C Hays; Zvinka Z Zlatar; Christina E Wierenga
Journal:  Cell Mol Neurobiol       Date:  2016-02-22       Impact factor: 5.046

Review 6.  FSL.

Authors:  Mark Jenkinson; Christian F Beckmann; Timothy E J Behrens; Mark W Woolrich; Stephen M Smith
Journal:  Neuroimage       Date:  2011-09-16       Impact factor: 6.556

Review 7.  Recommended implementation of arterial spin-labeled perfusion MRI for clinical applications: A consensus of the ISMRM perfusion study group and the European consortium for ASL in dementia.

Authors:  David C Alsop; John A Detre; Xavier Golay; Matthias Günther; Jeroen Hendrikse; Luis Hernandez-Garcia; Hanzhang Lu; Bradley J MacIntosh; Laura M Parkes; Marion Smits; Matthias J P van Osch; Danny J J Wang; Eric C Wong; Greg Zaharchuk
Journal:  Magn Reson Med       Date:  2014-04-08       Impact factor: 4.668

8.  The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments.

Authors:  Krzysztof J Gorgolewski; Tibor Auer; Vince D Calhoun; R Cameron Craddock; Samir Das; Eugene P Duff; Guillaume Flandin; Satrajit S Ghosh; Tristan Glatard; Yaroslav O Halchenko; Daniel A Handwerker; Michael Hanke; David Keator; Xiangrui Li; Zachary Michael; Camille Maumet; B Nolan Nichols; Thomas E Nichols; John Pellman; Jean-Baptiste Poline; Ariel Rokem; Gunnar Schaefer; Vanessa Sochat; William Triplett; Jessica A Turner; Gaël Varoquaux; Russell A Poldrack
Journal:  Sci Data       Date:  2016-06-21       Impact factor: 6.444

9.  fMRIPrep: a robust preprocessing pipeline for functional MRI.

Authors:  Russell A Poldrack; Krzysztof J Gorgolewski; Oscar Esteban; Christopher J Markiewicz; Ross W Blair; Craig A Moodie; A Ilkay Isik; Asier Erramuzpe; James D Kent; Mathias Goncalves; Elizabeth DuPre; Madeleine Snyder; Hiroyuki Oya; Satrajit S Ghosh; Jessey Wright; Joke Durnez
Journal:  Nat Methods       Date:  2018-12-10       Impact factor: 28.547

10.  Arterial spin labeling versus 18F-FDG-PET to identify mild cognitive impairment.

Authors:  Sudipto Dolui; Zhengjun Li; Ilya M Nasrallah; John A Detre; David A Wolk
Journal:  Neuroimage Clin       Date:  2019-12-23       Impact factor: 4.881
View more
  1 in total

1.  ASL-BIDS, the brain imaging data structure extension for arterial spin labeling.

Authors:  Patricia Clement; Marco Castellaro; Thomas W Okell; David L Thomas; Pieter Vandemaele; Sara Elgayar; Aaron Oliver-Taylor; Thomas Kirk; Joseph G Woods; Sjoerd B Vos; Joost P A Kuijer; Eric Achten; Matthias J P van Osch; John A Detre; Hanzhang Lu; David C Alsop; Michael A Chappell; Luis Hernandez-Garcia; Jan Petr; Henk J M M Mutsaerts
Journal:  Sci Data       Date:  2022-09-06       Impact factor: 8.501
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.