| Literature DB >> 35682604 |
Cesare Faldini1, Marco Manzetti1, Simona Neri2, Francesca Barile1, Giovanni Viroli1, Giuseppe Geraci1, Francesco Ursini2,3, Alberto Ruffilli1.
Abstract
Adolescent idiopathic scoliosis (AIS) is a progressive deformity of the spine. Scoliotic curves progress until skeletal maturity leading, in rare cases, to a severe deformity. While the Cobb angle is a straightforward tool in initial curve magnitude measurement, assessing the risk of curve progression at the time of diagnosis may be more challenging. Epigenetic and genetic markers are potential prognostic tools to predict curve progression. The aim of this study is to review the available literature regarding the epigenetic and genetic factors associated with the risk of AIS curve progression. This review was carried out in accordance with Preferential Reporting Items for Systematic Reviews and Meta-analyses (PRISMA) guidelines. The search was carried out in January 2022. Only peer-reviewed articles were considered for inclusion. Forty studies were included; fifteen genes were reported as having SNPs with significant association with progressive AIS, but none showed sufficient power to sustain clinical applications. In contrast, nine studies reporting epigenetic modifications showed promising results in terms of reliable markers. Prognostic testing for AIS has the potential to significantly modify disease management. Most recent evidence suggests epigenetics as a more promising field for the identification of factors associated with AIS progression, offering a rationale for further investigation in this field.Entities:
Keywords: adolescent idiopathic scoliosis; curve progression; epigenetics; genetics; prognostic
Mesh:
Year: 2022 PMID: 35682604 PMCID: PMC9180299 DOI: 10.3390/ijms23115914
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 6.208
Figure 1Parameters related to AIS ordered following their impact on scoliosis progression: (A) Age < 12 years; (B) premenarche status; (C) localization of the main curve; (D) Tanner stage; (E) main curve Cobb angle at diagnosis; (F) Risser Stage; (G) status of triradiate cartilage; (H) high peak velocity; (I) genetic (left) and epigenetic (right) factors.
Figure 2Prisma 2009 flow diagram of the included studies.
Details of the included studies. (NS = non specified).
| Study Design (Level of Evidence) | Study Population | Age | Ethnicity | Spine Deformity | Initial Cobb Angles | Follow-Up Period | Curve Progression Definition | Biologic Sample | Technique | Gene/s Involved | Results | Authors |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Retrospective case series (IV) | 304 girls with AIS (main curve < 10°) | 12.5 ± 1.6 years | Japanese | 189 double curves | 24.6 ± 10.0° | >1 year until growth maturation when height no longer changes | progression of 5° from initial evaluation | DNA from peripheral blood lymphocytes | PCR-RFLPs | ER gene | XbaJ polymorphism in the ER gene associated with curve progression |
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| Retrospective case series (IV) | 304 girls with AIS (main curve < 10°) | 12.5 ± 1.6 years | Japanese | 189 double curves | 24.6 ± 10.0° | >1 year until growth maturation when height no longer changes | progression of 5° from initial evaluation | DNA from peripheral blood lymphocytes | PCR-RFLPs | MED4 | The XbaJ polymorphism in the ER gene was associated with curve progression |
|
| Retrospective case series (IV) | 340 AIS female patients | 12–16 | Chinese | NS | ≥20° | Until skeletal maturity, 16 years, or surgical intervention | NS | Peripheral blood sample | PCR-RFLD | IGF-I |
Cobb’s angle higher in patients with TT genotype |
|
| Retrospective Case-control study | 540 AIS patients | AIS patients: | Chinese | -King III (24.9%) | 28.9° ± 11.5° | Until skeletal maturity at age 16 | Curve progression was defined as increase in Cobb | Peripheral blood sample | PCR-RFLD | ER gene | No association between curve severity and curve progression and the two SNPS (Pvull and XbaI) |
|
| Retrospective Case-Control Study (III) | 419 AIS patients | AIS patients: | Chinese | NS | High-risk genotype: 32.11° ± 11.67° | more | NS | Peripheral blood leukocytes | PCR-RFLD | MATN1 gene (matrilin 1 gene): rs1188402, rs1065755 rs1149045, rs1149046, rs3828051, | Genotype GG of Rs1149048 SNPs |
|
| Retrospective cohort study (III) | 67 AIS patients with double curve | AIS patients: | Chinese | 40 thoracic curves | The Cobb angle of the major curve of AIS | NS | Cobb angle >30 | Peripheral blood sample | PCR | ER1 | Significant association between double curve and CALM1 ER1 SNPs, and between Cobb angle and SNPs of ER1 gene (0.0128) |
|
| Retrospective Cohort study (III) | Screening group (277): | 9–13 at diagnosis | Caucasian | NS | >10° | Until skeletal maturity or sever curve | -Progression to a severe curve: Cobb angle >40° in an individual still growing. | Saliva samples | Quantitative PCR | 53 SNPs identified with a previous GWAS | Low-risk scores (<41) had NPV of 100%, 99%, and 97%, respectively, in the tested |
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| Retrospective case series (IV) | 312 AIS patients: | 12.7 ± 1.5, (10–15) | Chinese | Single thoracic curve 128 (32.1%) | <30: 195 patients | 14.4 ± 4.8 months, (7.2 ± 26.4) | Curve progression of more than 5° compared to the initial Cobb angle | Peripheral blood sample | PCR-FLP | Single nucleotide polymorphism (SNP) sites in the genes for | Statistically significant differences between the two groups in SNP rs9340799 in ERa. |
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| Retrospective Case-control study (III) | 362 AIS patients | AIS patients: | Chinese | Thoracic and thoracolumbar curves | 25°–40° | 30 ± 4.2 months | Curve progression of more than 5° compared to the initial Cobb angle | Peripheral blood sample | PCR-RFLP | NTF3 gene: | rs11063714 SNP significantly associated with lower mean maximum Cobb angle and brace treatment success |
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| Retrospective case-control study (III) | 529 AIS case | AIS case: | Chinese | Thoracic curve | AIS case: | NS | NS | Peripheral blood sample | PCR-RFLP | IL-17RC gene | GG genotype of Rs708567 showed significant association with higher Cobb angle |
|
| Retrospective Case-Control study (III) | 53 cases of AIS | AIS group: | Turkish | NS | 29.88° ± 11.78° | NS | NS | Peripheral blood samples | RT-PCR |
MCM6: |
There was no statistical difference ( |
|
| Retrospective case-control study (III) | 300 AIS patients | AIS group: | Russian | Thoracic: 167 (56.1%) |
10°–19°: 154 (51.3%) | 36 months | NS | Peripheral blood sample | RT-PCR |
TGF! | TGFB1 gene is associated with curve severity and progression in AIS. |
|
| Retrospective Case-control study (III) | 949 AIS patients | AIS group: | Chinese | NS | >20° | NS | NS | Peripheral blood sample | PCR-RFLP | LBX1 (ladybird homeobox 1) gene on chromosome 10q24.31. | TT genotype of rs11190870 |
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| Retrospective Case-Control study (III) | 68 AIS patients: | AIS group: | Korean | NS | Low risk: 25.8° | NS | NS | Peripheral blood samples | PCR-RFLP | CHL1 (rs10510181) | LAPTM4B rs2449539 significantly associated with higher risk of progression. |
|
| Retrospective Comparative study | 2217 AIS patient | Progression group: 17.2 | Japanese | Thoracic curve: 819 (93%) | >10° | NS | >40° | Peripheral blood sample | PCR | neurotrophin 3 | No statistical difference was found |
|
| Retrospective cohort study (III) | 405 European AIS patients: | European AIS | European and Chinese | Right thoracic and thoracolumbar curves | >10° | NS | NS | Peripheral blood sample | Exome sequencing | Rare damaging variants of FNB1 and FNB2 | FBN1 or FBN2 variant was associated with curve magnitude |
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| Retrospective Case-control study (III) | 248 AIS patients: | NS | Polish | Thoracic curve: 191 (77%) | NS | 3 years | The change of Cobb angle value on 2 consecutive radiographs taken at 6 months of distance | Peripheral blood samples | PCR-RFLP | ESR2 gene: | There was a difference |
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| Retrospective cohort study (II) | 126 AIS patients | 12.2 ± 1.2 | Caucasian | NS | 10°–25° | 28.5 ± 9.9 months | Patients who had curve progression | Saliva sample | Quantitative PCR | Prognostic test algorithm (AIS-PT, Scoliscore) with a scale (1–200). Cut point: Low risk (1 to 50 points), intermediate risk (51 to 179 points), or high risk (180 to 200 points). | No significant association between the continuous |
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| Retrospective cohort study (III) | 148 patients with severe AIS: | Severe AIS: | French-Canadian | NS | 56° ± 12° | NS | NS | Peripheral blood sample | Quantitative PCR | The authors stated a prognostic test algorithm (AIS-PT, Scoliscore) with a scale (1–200) based on 53 | None of the SNPs used were associated. |
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| Retrospective case series (IV) | 16 AIS patients | 12.5 | Caucasian | NS | 25.2° | 2.3 years | Cobb >45° | Saliva sample | Quantitative PCR | Prognostic test algorithm (AIS-PT, Scoliscore) with a scale (1–200). Cut point:160; 160–200 (high risk of curve progression with Cobb >45°) vs. <160 (low risk of curve progression with Cobb >45°) | The mean |
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| Case-only study (IV) | 670 AIS patients | -Non-progression group: | Chinese | NS | -22.6° ± 3.7° for non-progression group | NS | -Cobb angle <25° at final follow-up: non-progression | Peripheral blood sample | Quantitative PCR | The authors stated a prognostic test algorithm (AIS-PT; Scoliscore) with a scale ranging from 1 to 200 | Allele A of rs9945359 was significantly higher in the |
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| Genome-wide association study (GWAS) | 2142 patients with AIS | NS | Japanese | NS | NS | NS | Progression group: Cobb angle 40° | Peripheral blood sample | NS | MIR4300 microRNA host gene | rs1828853 showed association with progression of AIS. |
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| Retrospective Case-control study (III) | 2645 AIS patients | 12.5 ± 2.1 years for the patients | Chinese | NS | 56.2 ± 14.3° | NS | NS | Peripheral blood sample and bilateral intraoperative facet joint tissue | SNP Genotyping Assay | BNC2 | Genotype CC h larger |
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| Case only study (IV) | 1860 Patients with AIS | 10–18 years | Japanese | NS | Severe curve: 54.8° ± 12.1° | NS | -Severe curve: Cobb angle of 40) | Peripheral blood sample | PCR-RFLP | LBX1 (ladybird homebox 1) 10q24.31 | No significant |
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| Retrospective case-control study (III) | 319 AIS patients | AIS patients: | Chinese | major right thoracic curvature | Cobb >10° | Until skeletal maturity or surgery | -Progressive curve group: Cobb >40° | Peripheral blood samples | PCR-RFLP | LBX1, BNC2, SOX9/KCNJ2, GPR126, AJAP4, BCL-2, PAX3/ EPHA4, LBX1 (LBX1- | There was no association found between the seven SNPs with curve progression in AIS |
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| Prospective Case-control study (III) | 92 AIS patients: | AIS patients: | Chinese | Single thoracic, | AIS patients: | Until skeletal maturity | curve progression | Peripheral blood sample | Oligonucleotide Ligation and | The genome and methylome of peripheral monocytes were sequential | Methylation levels of site Cg01374129 (Has2 gene) |
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| Retrospective case-control study (III) | AIS patients: 13 | AIS patients: 15.54 ± 1.76 | Chinese | NS | AIS patients: | NS | NS | Human bone-derived primary bone cells from iliac crest bone tissue and serum | RT quantitative PCR | MiR-145 of Wnt/ß catenin | Significant |
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| Retrospective case-control study (III) | 50 patients with AIS | AIS patient: | Chinese | NS | 29 AIS patients > 40° | NS | NS | Peripheral blood sample | PCR and pyrosequencing | COMP gene promoter methylation | AIS patients with different levels of methylation showed significant differences in |
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| Retrospective Case-control study (III) | I960 AIS patients | AIS group: | Chinese | All AIS patients had main thoracic curve | AIS patients: 38.58 ± 12.38 | NS | NS | Peripheral blood samples | RT-PCR | FBN 1 & FBN 2 | The expression level of |
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| Retrospective Case-control study (III) | 50 patients with AIS | AIS patients: | Chinese | Thoracic or thoraco-lumbar curve | Cobb from 10° to 50° | NS | NS | Peripheral blood sample | Pyrosequencing | PITX1 | The methylation level of 6 CpG sites in PITX1 promoters was significantly associated with Cobb angle. |
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| Retrospective Case-control study (III) | 5 AIS patients: | AIS patients: | Chinese | AIS patients: | AIS patients: | NS | NS | Intraoperative paraspinal muscular samples | RNA sequences + Quantitative RT-PCR | ADIPOQ mRNA and H19 mRNA |
ADIPOQ mRNA and H19mRNA showed statistical significance ( |
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| Retrospective Case-control study (III) | 100 AIS patients: | AIS patients: | Polish | Right-sided thoracic curve of Cobb angle greater than 20° (Lenke types 1 and 3). | AIS patients: | 34.8 ± 21.6 | More than 12° of Cobb angle every year | Peripheral blood sample | PCR-FRET | TIMP2 | Four of the polymorphisms showed non-equal distributions in patients with different progression rates. |
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| Retrospective Case-control study (III) | 223 AIS patients | AIS patients: | Chinese | Lenke 1: 23 | 130 patients < 23° | 11.9 (1.4 months to 31 months) | a curve greater than 30° after | Peripheral blood sample | Exome sequencing | The authors searched for rare damaging variants (defined as missense, nonsense, frameshift, | The number of rare damaging |
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| Retrospective Cohort study | 2272 patients with severe AIS | NS | Japanese; Chinese and Scandinavian | NS | NS | NS | NS | Peripheral blood or saliva sample | PCR based | 17q24.3 near the genes SOX9 and KCNJ2) | rs12946942 SNP showed significant association in severe AIS patients: |
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| Retrospective Case-Control study (III) | 50 AIS patients | AIS patients: | Chinese | NS | AIS patients: | 12 months | NS | Peripheral blood samples | RT-PCR | PCDH10 gene methylation and expression | PCDH10 methylation level significantly correlated to curve severity |
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| Retrospective Case-control study (III) | (1) mi-RNA sequencing cohort: | Mi RNA sequence cohort: | Chinese | NS | Mi RNA sequence cohort: | NS | NS | Peripheral blood sample and bone tissue | RT-PCR | miR-151a-3p and GREM1 expression | miR-151a-3p and GREM1 expression significantly correlated to severe AIS curves |
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| Retrospective case series (IV) | 211 AIS patients: | AIS patients: | Caucasian | NS | AIS patients: | 12 months |
The change of | Peripheral blood sample | PCR-RFLP for: | CHD7 |
rs1017861 and |
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| Retrospective case-control study (III) | 1952 AIS patients: | AIS group: | Chinese |
-1218 (62.4%) main thoracic curve | 36.8 ± 3.2, (22–66) | NS |
Progression group: | Peripheral blood sample | RT-PCR | MIR4300 HG gene |
Significant difference |
|
| Retrospective case series (IV) | 8 female monozygotic twin pairs ( | All individuals: | Caucasian | NS | 39.6° ± 15.3° | NS | NS | Peripheral blood sample | Microarray analysis | Genome-wide methylation in blood (Differentially methylation region (DMR) promoter enrichment analyses) | SNPs hypomethylation associated with curve severity |
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| Retrospective case series (IV) | 29 AIS surgery patients: | All individuals: | Caucasian | Main thoracic curve | All individuals: | 2 years | NS | Intraoperative deep paraspinal muscles sample and trapezius muscles | PRC and Pyrosequencing | Methylation levels of ESR1 regulatory regions | DRM1/2 methylation status was significantly associated with curve severity |
|
The reported SNPs with statistically significant evidence in AIS curve progression (NS = non-specified, OR = odds ratio).
| Gene | SNP Risk Allele | Molecular Pathway | Sensitivity/Specificity/OR/CI | Results | Reference | |
|---|---|---|---|---|---|---|
|
| XbaI site (A/G rs934099)–Genotype Xx | Estrogen determines different skeletal and sexual growth reactions that are genetically determined by the ER gene polymorphism | NS | 0.03 | The mean (±SD) initial Cobb angle was 27.5 ± 14.8 with genotype XX, 26.2 ± 9.9 with genotype Xx, and 23.3 ± 8.5 with genotype xx, and the differences were statistically significant. | M. Inoue (2002) |
|
| PvuLL site (rs2234693) | Estrogen determines different skeletal and sexual growth reactions that are genetically determined by the ER gene polymorphism | Sensitivity: 28–69% | 0.0128 | A significant difference was shown between cases (Cobb angle >40°) and controls in the polymorphic distribution of the rs2234693 (Pvu II) site in the ER 1 gene (P 0.0128). In addition, the frequency of the -16C allele in the cases (73.3%) was less than in the controls (81.5%). | D. Zhao (2009) |
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| rs9340799-GA and G allele | Estrogen determines different skeletal and sexual growth reactions that are genetically determined by the ER gene polymorphism | Sensitivity: 51% | <0.001 | Statistically significant differences between the two groups (progression vs. non-progression) in SNP rs9340799 in ERa (genotype GA (50.9 vs. 17.9) and G allele (27.1 vs. 12.0%). | L. Xu (2011) |
|
| rs12885713 | Calmodulin regulates the contractile properties of muscles and platelets through its interaction with actin and myosin and regulates cellular calcium through transport across the cell membrane | Sensitivity: 28–69% | 0.034 | A significant association was found between double curve and polymorphic distributions of CALM 1 SNPs (0.034). A combination of CALM1 and ER1 gene polymorphisms might be related to double curve in patients with AIS, which is associated with curve progression. | D. Zhao (2009) |
|
| Rs708567-genotype GG | The IL-17R complex mediates the signal transduction of the IL-17 signaling axis. This promotes the production of pro-inflammatory cytokines. | Sensitivity: 94% | 0.007 | Overall, AIS patients with the GG genotype showed a significantly higher mean maximum Cobb angle (36.01° ± 13.12°, 20°–58°) than those with the AG genotype (28.92° ± 7.43°, range 20°–51°, | S. Zhou (2012) |
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| rs5742612-TT genotype | IGF-I has a pivotal role in bone growth determining different skeletal growth | Sensitivity: 88% | 0.04 | Cobb’s angle is higher in patients with TT genotype (Mean Cobb’s angle: 38.1° in TT vs. 35.9° in TC vs. 33.2° in CC group). | Y. Yeung (2006) |
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| rs5742612-GG genotype | IGF-I has a pivotal role in bone growth determining different skeletal growth | NS | 0.01 | IGF1polymorphism rs5742612 significantly differs among controls, high-risk, and low-risk groups. | S. Moon (2013) |
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| rs1149048-allele G | Matrilin-1 is secreted primarily by chondrocytes and has a role in the assembly of cartilage. It has been confirmed that matrilin-1 has an important function in the organization of chondrocyte into distinct zones of growth plate. Disturbance of the chondrocyte zonal distribution could lead to musculoskeletal disorders, such as scoliosis. | OR = 1.35 within 95% | 0.02 | The mean maximal Cobb angle of patients with Rs1149048 SNPs is genotype GG: 37.91 ± 17.081, Genotype AA: 33.88 ± 14.681, Genotype AG: 32.25 ± 12. 421. | Z. Chen (2009) |
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| rs10488682-Genotype AT and A allele | Tryptophan hydroxylases catalyze the biopterin-dependent monooxygenation of tryptophan to 5- hydroxytryptophan to (5-HTP), which is subsequently decarboxylated to form the neurotransmitter serotonin (5-hydroxytryptamine or 5-HT). It is the rate-limiting enzyme in the biosynthesis of serotonin. | Sensitivity: 51% | 0.002 | Statistically significant differences between the two groups (progression vs. non-progression) in SNP rs10488682 in THP-1: genotype AT (33.3 vs. 13.0%), allele A (16.7 vs. 9.6%). | L. Xu (2011) |
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| rs11063714-AA genotype | Scoliosis has developed | Sensitivity: 43% | <0.05 | For rs11063714 SNP, AIS patients with AA genotype had a significantly lower mean maximum Cobb angle than the patients with AG or GG genotypes, respectively: 25.45 ± 8.69 vs. 32.32 ± 13.36 vs. 34.26 ± 17.41. | Y. Qiu (2012) |
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| rs11190870-TT genotype | LBX1 has an important role in developmental processes. This gene is expressed in the central nervous system and skeletal muscle | OR = 1.51 within 95% | <0.001 | AIS patients with TT genotype of rs11190870 | H. Jiang (2013) |
|
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Rs1800469 | TGFβ-1 protein triggers chemical signals that regulate various cell activities inside the cell, including the growth and division (proliferation) of cells, the maturation of cells to carry out specific functions (differentiation), cell movement (motility), and controlled cell death (apoptosis) | OR = 3.78 within 95% | 0.038 | Kruskal–Wallis analysis of | I. Ryzhkov (2013) |
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| rs2449539 | LAPTM4B is required for optimal lysosomal function. It blocks EGF-stimulated EGFR intraluminal sorting and degradation. Conversely, by binding with the phosphatidylinositol 4,5-bisphosphate, it regulates its PIP5K1C interaction, inhibits HGS ubiquitination, and relieves LAPTM4B inhibition of EGFR degradation | NS | 0.014 | LAPTM4B (lysosomal-associated transmembrane protein 4β) polymorphism rs2449539 significantly differs among the lower and high-risk groups. TT genotype most frequent in high-risk group and TC genotype in control group. | S. Moon (2013) |
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| Rage damaging variants | Fibrillin mutations are the main mutated protein causing Marfan syndrome. This mutation usually interferes with the assembly of microfibrils resulting in a dominant, negative mechanism. | OR = 3.5 within 95% | 0.026 | The average spinal curve in AIS cases with a rare FBN1 or FBN2 variant was 50.58°, compared with 42.18° in cases with no fibrillin variant. This indicates that | J Buchan (2014) |
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| 106 SNPs studied | Fibrillin mutations are the main mutated protein causing Marfan syndrome. This mutation usually interferes with the assembly of microfibrils resulting in a dominant, negative mechanism. | OR = 1.78 within 95% | 0.02 | The decreased expression level of FBN1 was remarkably correlated with the curve severity. The functional role of FBN1 in the progression of the AIS is worthy of further investigation. | F. Sheng (2018) |
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| rs10738445-Genotype CC | This gene encodes a conserved zinc finger protein. The encoded protein functions in skin color saturation. Mutations in this gene are associated with facial pigmented spots. This gene is also associated with susceptibility to adolescent idiopathic scoliosis | OR = 1.24 within 95% | 0.01 | AIS patients were found to have significantly higher expression of the BNC2 as compared to controls. Moreover, AIS patients with genotype CC have larger Cobb angle than those with genotype TT (41.3 ± 13.5 vs. 35.4 ± 14.1). | L. Xu (2017) |
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| rs2277700, rs11077401, rs2376999, and rs4789934 | The proteins encoded by this gene family are natural inhibitors of the matrix metalloproteinases (MMP), a group of peptidases involved in degradation of the extracellular matrix. | rs2277700-allele G: | rs2277700-allele G: <0.01 | Four of the polymorphisms (rs2277700, rs11077401, rs2376999, and rs4789934) showed non-equal distributions either in genotype or/and allele distributions in the patients of different progression rates. | M. Andrusiewicz (2019) |
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| rs12946942-recessive allele | It is expressed by proliferating, but not hypertrophic chondrocytes, which is essential for the differentiation of precursor cells into chondrocytes | OR = 1.36 within 95% | <0.01 | The recessive allele of rs12946942 SNP showed significant association in severe AIS patients. | K. Takeda (2019) |
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| rs1017861-GG and AA alleles | CHD7 is essential for the formation of multipotent migratory neural crest and their ability to migrate throughout the body. | Rs1017861 GG: | Rs1017861 GG: | Two polymorphisms, rs1017861 and rs4738813, were associated with curve severity and progression rate. | K. Borysiak (2020) |
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| Rs1828853 | MIR4300HG is highly expressed in spinal cord, brain, skeletal muscle, salivary gland, and epithelial cells in various tissues and sperm | OR = 1.56 within 95% | <0.001 | MIR4300 host gene SNP rs1828853 showed association with progression of AIS. | Y. Ogura (2017) |
|
| rs35333564-allele G | RNAs are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs |
rs35333564-allele G: | 0.01 |
Significant difference between two groups regarding both genotype frequency (3.1% vs. 1.3%, | Y. Wang (2021) |
Epigenetic factors associated with AIS progression (NS = non-specified, OR = odds ratio, AUC = area under the curve).
| Epigenetic Marker | Technique | Biological Sample | Molecular Pathway | Sensitivity/Specificity | Results | Reference | |
|---|---|---|---|---|---|---|---|
|
| Whole-exome sequencing and quantitative DNA methylation analysis by Massarray | Peripheral blood cell DNA of AIS discordant monozygotic twin pairs | The Wnt/β-catenin signaling pathway plays a prominent role in maintaining cellular homeostasis, bone formation, and remodeling. | Sensitivity: 76.4%, | <0.0001 | Methylation level of cg01374129 site (Has2 gene) was significantly lower in the progression group than in the non-progression group. | Y. Meng (2018) |
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| Array-based genome-wide methylation analysis | Peripheral blood cell DNA of AIS monozygotic twin pairs | WNT signaling pathway relevant for bone formation and remodeling; neuropeptide Y (NPY), regulator of bone and energy homeostasis | NS | =0.494, FDR adjusted | Hypomethylation of four CpG sites was associated with curve severity (cg02477677, cg12922161, cg08826461, and cg1638077). Annotation of two of the regions implicated the NPY gene on chr. 7 and the WNT10A gene on chr. 2 | P. Carry (2021) |
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| Array-based miRNA expression analysis | Iliac crest bone tissue cells of AIS patients and serum | WNT signaling pathway relevant to bone formation and remodeling | Sensitivity 72.7% | <0.05 | Significant negative correlations between circulating miR-145 and serum sclerostin, osteopontin, and osteoprotegerin in AIS patients and not in control group. Aberrant miRNA expression may contribute to low bone mass and affect osteocyte function, with possible involvement in | J. Zhang (2018) |
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| Pyrosequencing | Peripheral blood cell DNA of AIS patients and controls | COMP (cartilage oligomerix matrix protein) belongs to the trombospondin gene family and is a marker of cartilage turnover. | NS | <0.001 | The methylation level of five CpGs in the COMP promoter was significantly correlated with Cobb angle of the main curve and chronological age ( | S. Mao (2018) |
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| Pyrosequencing | Peripheral blood cell DNA of AIS patients and controls | PITX1 is a member of the RIEG/PITX homeobox transcription factor family, involved in organ development. Mutations in this gene have been associated with various bone-related diseases. | NS | <0.001 | The methylation level of 6 CpG sites in PITX1 promoter was significantly associated with Cobb angle of the main curve. The comparative analysis showed significant difference in age ( | B. Shi (2018) |
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| Pyrosequencing | Peripheral blood cell DNA of controls and AIS patients | protocadherin10 (PCDH10) gene, involved in immune process and Wnt | NS | <0.001 | AIS patients were associated with high Higher DNA methylation level and low gene | B. Shi (2019) |
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| RNA-seq | Paravertebral muscle concave and convex muscles of AIS patients | ADIPOQ (PARR signaling pathway, gene encoding for adiponectin) and H19 (long non-coding RNA generating miR-675-5p and miR-675-3p) H19 can promote skeletal muscle differentiation and regeneration and regulate glucose metabolism. | NS |
<0.001 |
RNA-seq revealed transcriptomic differences between two sides of paravertebral muscle in AIS patients. This implies that transcriptomic differences caused by epigenetic factors in affected individuals may account for | H. Jiang (2018) |
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| Pyrosequencing | Paraspinal superficial and deep muscles of AIS patients | Estrogen receptor | NS | 0.02 | In the deep paravertebral muscle, the methylation level within the ESR1 T-DMR2 region on the concave side of the curvature was significantly different between groups of patients with a Cobb angle >70° or <70° at four CpG sites: CPG2, CPG3, CPG4, and CPG6. No | P. Janusz, (2021) |
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| NGS Small RNA sequencing | Cell-free RNA from peripheral blood plasma of severe and mild AIS patients and controls | Skeletal homeostasis | AUC = 0.885 within 95% | <0.05 | miR-151a-3p and GREM1 expression significantly correlated with severe AIS curves. Plasma miR-151a-3p might serve as a biomarker for severe AIS. The overexpression of miR-151a-3p may contribute to the progression of scoliosis via inhibition of GREM1 expression in osteoblasts to interrupt bone homeostasis. Finally, relatively lower methylation | Wang (2020) |