| Literature DB >> 35681326 |
Jesús Gilberto Arámburo-Gálvez1,2, Aldo Alejandro Arvizu-Flores1, Feliznando Isidro Cárdenas-Torres2, Francisco Cabrera-Chávez2, Giovanni I Ramírez-Torres2,3, Lilian Karem Flores-Mendoza4, Pedro Erick Gastelum-Acosta3, Oscar Gerardo Figueroa-Salcido2, Noé Ontiveros4.
Abstract
Chickpea (Cicer arietinum L.) peptides have shown in vitro potential to inhibit the angiotensin I-converting enzyme (ACE-I). However, the potential molecular interactions between chickpea peptides (CP) and ACE-I as well as their ADMET (absorption/distribution/metabolism/excretion/toxicity) characteristics remain unknown. Thus, our aim was to study the in silico interactions of CP with ACE-I and the CP ADMET characteristics. Legumin and provicilin sequences were submitted to in silico analysis to search for ACE-I inhibitory peptides. Simulated enzymatic hydrolysis was performed using the BIOPEP-UWM database, and the ACE-I inhibitory peptides generated (EC50 ≤ 200 μM) were selected to perform molecular docking and ADMET analysis. After hydrolysis, 59 out of 381 peptides with ACE-I inhibitory potential were released. Based on A and B parameters, the legumin peptides showed better ACE-I inhibitory potential than the provicilin ones. CP mainly interact with residues from pocket S1 (Ala354/Glu384) and S2 (His353/His513) through hydrogen bonds (distances < 3.0 Å) and hydrophobic interactions (binding energy from -5.7 to -9.2 kcal/mol). Through ADMET analysis, CP showed optimal values for inhibiting ACE-I in vivo. ACE-I inhibitory peptides from legumin and provicilin can bind strongly and tightly to the active site of ACE-I. Further studies to evaluate in vivo the antihypertensive effects of CP are warranted.Entities:
Keywords: ACE-I; BIOPEP; antihypertensive peptides; bioactive peptides; chickpea; hypertension; in silico; molecular docking
Year: 2022 PMID: 35681326 PMCID: PMC9180818 DOI: 10.3390/foods11111576
Source DB: PubMed Journal: Foods ISSN: 2304-8158
Figure 1Workflow employed to characterize CP with ACE-I inhibitory capacity. A: frequency of ACE-I-inhibitory fragments, B: potential ACE-I inhibitory activity, AE: frequency of released fragments with ACE-I-inhibitory activity, BE: ACE-I-inhibitory activity of peptides potentially released by enzymatic hydrolysis, HIA: human intestinal absorption.
ACE-I inhibitory predicted values of legumin and provicilin from chickpea (Cicer arietinum L.).
| Protein | A | B | In Silico Hydrolysis | ||
|---|---|---|---|---|---|
| Proteases | AE | BE | |||
| Legumin | 0.4335 | 0.0201 | Pepsin | 0.0101 | 0.00112 |
| Trypsin | 0.0101 | 0.00018 | |||
| Chymotrypsin | 0.0282 | 0.00168 | |||
| Gastrointestinal digestion | 0.0343 | 0.00206 | |||
| Papain | 0.0605 | 0.00302 | |||
| Alcalase | 0.0323 | 0.00273 | |||
| Provicilin | 0.3642 | 0.0110 | Pepsin | 0.0155 | 0.00011 |
| Trypsin | 0.0132 | 0.00058 | |||
| Chymotrypsin | 0.0221 | 0.00035 | |||
| Gastrointestinal digestion | 0.0419 | 0.00024 | |||
| Papain | 0.0442 | 0.00139 | |||
| Alcalase | 0.0287 | 0.00067 | |||
Figure 2Profile of ACE-I inhibitory peptides released after in silico enzymatic hydrolysis of chickpea (Cicer arietinum L.) proteins. (A) legumin and (B) provicilin. The color indicates the enzyme that released the peptides after enzymatic hydrolysis. GID: Gastrointestinal digestion.
The molecular docking results for CP with the active sites of ACE-I.
| Peptide/Ligand | BIOPEP ID | Binding Energy (Kcal/Mol) | Protein | Location | Released by | EC50 (µM/L) | PubChem/Satpdb ID |
|---|---|---|---|---|---|---|---|
| Lisinopril | −8.6 | 5362119 | |||||
| VVF | 9044 | −9.2 | Legumin | [147–149] | Papain | 35.45 | 7014911 |
| VAF | 8126 | −8.6 | Legumin | [434–436] | GID; Chymotrypsin (A) | 35.8 | satpdb14951 |
| [406–408] [434–436] | Alcalase | ||||||
| IW | 7544 | −8.5 | Legumin | [457,458] | Alcalase | 4.7 | 7019084 |
| RY | 3380 | −8.4 | Legumin | [193,194] | Chymotrypsin (A); Alcalase | 10.5 | 7021456 |
| RF | 3489 | −8.2 | Legumin | [134,135] | Chymotrypsin (A) | 93 | 150964 |
| [354,355] | Chymotrypsin (A); Pepsin (pH 1.3);Alcalase | ||||||
| IVR | 7502 | −8.0 | Provicilin | [2–4] | GID | 0.81 | 25217595 |
| YL | 3350 | −7.9 | Legumin | [182–183] | Papain; GID | 122 | 87071 |
| VF | 3384 | −7.8 | Legumin | [103,104] | Chymotrypsin (A); GID; Alcalase | 9.2 | 6993120 |
| [148,149] | Alcalase | ||||||
| Provicilin | [122,123] | Papain; Alcalase | |||||
| [58,59] | Alcalase | ||||||
| SF | 7685 | −7.7 | Provicilin | [176,177] | Papain; Chymotrypsin (A), Pepsin (pH 1.3); GID | 130.2 | 7009597 |
| Legumin | [10,11] | Papain; Chymotrypsin (A), Pepsin (pH 1.3); GID | |||||
| [347,348] | Papain | ||||||
| AF | 7583 | −7.5 | Provicilin | [407,408] | Papain | 190 | 6992394 |
| Legumin | [435,436] | Papain | |||||
| KF | 7692 | −7.4 | Legumin | [124,125] | Alcalase | 28.3 | 151410 |
| CF | 7751 | −7.3 | Legumin | [12,13] | Papain; Chymotrypsin (A), Pepsin (pH 1.3); GID; Alcalase | 1.96 | 25051327 |
| [19,20] | Papain | ||||||
| PR | 3537 | −7.2 | Provicilin | [150,151] | Papain; Trypsin; GID | 4.1 | 151004 |
| Legumin | [178,179] | GID | |||||
| TF | 8185 | −7.1 | Provicilin | [110,111] | GID | 18 | 7010580 |
| DR | 10091 | −7.0 | Provicilin | [203,204] | Trypsin; GID | 110.5 | 16122509 |
| Legumin | [440,441] | GID | |||||
| LR | 9213 | −6.8 | Provicilin | [148,149] | Trypsin | 158 | 152914 |
| IL | 9079 | −6.5 | Provicilin | [139,140] | Papain; GID | 54.95 | 7019083 |
| [449,450] | Alcalase | ||||||
| Legumin | [382,383] | Alcalase | |||||
| AR | 7742 | −6.4 | Legumin | [390,391] | GID; Trypsin; Papain | 95.5 | 446132 |
| [320,321] | Papain | ||||||
| DG | 7681 | −5.8 | Provicilin | [23,24] | Papain | 190.1410 | 151148 |
| [49,50] | Papain | ||||||
| [405,406] | Papain | ||||||
| VK | 7558 | −5.7 | Legumin | [247,248] | Trypsin; GID | 13 | 168058 |
| [245,246] | Alcalase |
Figure 3Docking modeling visualization of VVF and VAF tripeptide with the active site of ACE-I. (A) Overlap of docking results of VAF and VVF with ACE-I-lisinopril complex (PDB: 1O8A). The box is the close-up view of the overlap poses of VAF, VVF, and lisinopril interacting with the ACE-I pocket. The peptides are presented in the stick model. VVF (Val-Val-Phe): Green sticks; VAF (Val-Ala-Phe): Blue sticks; Lisinopril: Yellow sticks. (B) Docking modeling visualization of VVF with the active site of ACE-I. (C) Docking modeling visualization of VAF tripeptide with the active site of ACE-I. (D) Docking modeling visualization of Lisinopril with the active site of ACE-I. Interactions distances (Å) are shown in red numbers.