Literature DB >> 35678918

Dissecting cell fate dynamics in pediatric glioblastoma through the lens of complex systems and cellular cybernetics.

Abicumaran Uthamacumaran1.   

Abstract

Cancers are complex dynamic ecosystems. Reductionist approaches to science are inadequate in characterizing their self-organized patterns and collective emergent behaviors. Since current approaches to single-cell analysis in cancer systems rely primarily on single time-point multiomics, many of the temporal features and causal adaptive behaviors in cancer dynamics are vastly ignored. As such, tools and concepts from the interdisciplinary paradigm of complex systems theory are introduced herein to decode the cellular cybernetics of cancer differentiation dynamics and behavioral patterns. An intuition for the attractors and complex networks underlying cancer processes such as cell fate decision-making, multiscale pattern formation systems, and epigenetic state-transitions is developed. The applications of complex systems physics in paving targeted therapies and causal pattern discovery in precision oncology are discussed. Pediatric high-grade gliomas are discussed as a model-system to demonstrate that cancers are complex adaptive systems, in which the emergence and selection of heterogeneous cellular states and phenotypic plasticity are driven by complex multiscale network dynamics. In specific, pediatric glioblastoma (GBM) is used as a proof-of-concept model to illustrate the applications of the complex systems framework in understanding GBM cell fate decisions and decoding their adaptive cellular dynamics. The scope of these tools in forecasting cancer cell fate dynamics in the emerging field of computational oncology and patient-centered systems medicine is highlighted.
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  Artificial intelligence; Attractors; Cancer; Cellular decision-making; Complex systems; Computational medicine; Cybernetics; Epigenetics; Networks; Systems oncology

Mesh:

Year:  2022        PMID: 35678918     DOI: 10.1007/s00422-022-00935-8

Source DB:  PubMed          Journal:  Biol Cybern        ISSN: 0340-1200            Impact factor:   3.072


  153 in total

1.  Quantum machine learning.

Authors:  Jacob Biamonte; Peter Wittek; Nicola Pancotti; Patrick Rebentrost; Nathan Wiebe; Seth Lloyd
Journal:  Nature       Date:  2017-09-13       Impact factor: 49.962

Review 2.  Cooperation among cancer cells: applying game theory to cancer.

Authors:  Marco Archetti; Kenneth J Pienta
Journal:  Nat Rev Cancer       Date:  2019-02       Impact factor: 60.716

3.  Primordial oscillations in life: Direct observation of glycolytic oscillations in individual HeLa cervical cancer cells.

Authors:  Takashi Amemiya; Kenichi Shibata; Yoshihiro Itoh; Kiminori Itoh; Masatoshi Watanabe; Tomohiko Yamaguchi
Journal:  Chaos       Date:  2017-10       Impact factor: 3.642

Review 4.  TPT1/ TCTP-regulated pathways in phenotypic reprogramming.

Authors:  Robert Amson; Salvatore Pece; Jean-Christophe Marine; Pier Paolo Di Fiore; Adam Telerman
Journal:  Trends Cell Biol       Date:  2012-10-30       Impact factor: 20.808

Review 5.  Cancer stem cells revisited.

Authors:  Eduard Batlle; Hans Clevers
Journal:  Nat Med       Date:  2017-10-06       Impact factor: 53.440

Review 6.  Par complex in cancer: a regulator of normal cell polarity joins the dark side.

Authors:  V Aranda; M E Nolan; S K Muthuswamy
Journal:  Oncogene       Date:  2008-11-24       Impact factor: 9.867

Review 7.  Cancer stem cells as key drivers of tumour progression.

Authors:  Ain Zubaidah Ayob; Thamil Selvee Ramasamy
Journal:  J Biomed Sci       Date:  2018-03-06       Impact factor: 8.410

8.  Glioblastoma Myeloid-Derived Suppressor Cell Subsets Express Differential Macrophage Migration Inhibitory Factor Receptor Profiles That Can Be Targeted to Reduce Immune Suppression.

Authors:  Tyler J Alban; Defne Bayik; Balint Otvos; Anja Rabljenovic; Lin Leng; Leu Jia-Shiun; Gustavo Roversi; Adam Lauko; Arbaz A Momin; Alireza M Mohammadi; David M Peereboom; Manmeet S Ahluwalia; Kazuko Matsuda; Kyuson Yun; Richard Bucala; Michael A Vogelbaum; Justin D Lathia
Journal:  Front Immunol       Date:  2020-06-18       Impact factor: 7.561

Review 9.  Deciphering cell-cell interactions and communication from gene expression.

Authors:  Erick Armingol; Adam Officer; Olivier Harismendy; Nathan E Lewis
Journal:  Nat Rev Genet       Date:  2020-11-09       Impact factor: 59.581

10.  Time-resolved single-cell analysis of Brca1 associated mammary tumourigenesis reveals aberrant differentiation of luminal progenitors.

Authors:  Karsten Bach; Sara Pensa; Marija Zarocsinceva; Katarzyna Kania; Julie Stockis; Silvain Pinaud; Kyren A Lazarus; Mona Shehata; Bruno M Simões; Alice R Greenhalgh; Sacha J Howell; Robert B Clarke; Carlos Caldas; Timotheus Y F Halim; John C Marioni; Walid T Khaled
Journal:  Nat Commun       Date:  2021-03-09       Impact factor: 14.919

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