Literature DB >> 35678867

Roseicella aquatilis sp. nov., isolated from freshwater lake.

Dan-Dan Zhang1, Ya-Nan Zhao1, Rui-Han He1, Yu-Qi Yan1, Zong-Jun Du2,3.   

Abstract

A novel Gram-stain-negative, non-motile, ellipsoidal-shaped, red-pigmented, facultatively aerobic strain designated NE82T was isolated from mud sample from Jiugongli Lake in Inner Mongolia Autonomous Region, China. Optimal growth occurred at 28-33 °C (range 15-42 °C) and pH 7.0-7.5 (range 5.5-8.5) with 0% (w/v) NaCl (range 0-1.0%). Cells of strain NE82T were 0.4-0.9 μm in diameter, catalase-positive and oxidase-negative. Q-10 was the sole respiratory quinone and the major cellular fatty acids (> 10%) in strain NE82T were summed feature 8 (C18:1 ω7c and C18:1 ω6c). The polar lipids of strain NE82T were phosphatidylethanolamine, phosphatidylcholine, phosphatidylglycerol, an unidentified aminophospholipid and four unidentified phospholipids. The G+C content of the genomic DNA was 72.0 mol%. Based on the 16S rRNA gene sequence, strain NE82T showed the highest similarity (97.2%) to Roseicella frigidaeris DB1506T within the family Acetobacteraceae, thus representing a novel species of the genus Roseicella, for which the name Roseicella aquatilis sp. nov. is proposed. The type strain is NE82T (= KCTC 62412T = MCCC 1H00292T).
© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.

Entities:  

Keywords:  16S rRNA gene; Phylogenetic analysis; Roseicella aquatilis sp. nov.

Mesh:

Substances:

Year:  2022        PMID: 35678867     DOI: 10.1007/s00203-022-02996-6

Source DB:  PubMed          Journal:  Arch Microbiol        ISSN: 0302-8933            Impact factor:   2.552


  13 in total

1.  Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family.

Authors:  Jean-Francois Bernardet; Yasuyoshi Nakagawa; Barry Holmes
Journal:  Int J Syst Evol Microbiol       Date:  2002-05       Impact factor: 2.747

2.  Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species.

Authors:  Ok-Sun Kim; Yong-Joon Cho; Kihyun Lee; Seok-Hwan Yoon; Mincheol Kim; Hyunsoo Na; Sang-Cheol Park; Yoon Seong Jeon; Jae-Hak Lee; Hana Yi; Sungho Won; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2011-11-25       Impact factor: 2.747

3.  ContEst16S: an algorithm that identifies contaminated prokaryotic genomes using 16S RNA gene sequences.

Authors:  Imchang Lee; Mauricio Chalita; Sung-Min Ha; Seong-In Na; Seok-Hwan Yoon; Jongsik Chun
Journal:  Int J Syst Evol Microbiol       Date:  2017-06-22       Impact factor: 2.747

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Evolutionary trees from DNA sequences: a maximum likelihood approach.

Authors:  J Felsenstein
Journal:  J Mol Evol       Date:  1981       Impact factor: 2.395

6.  Reichenbachiella faecimaris sp. nov., isolated from a tidal flat, and emended descriptions of the genus Reichenbachiella and Reichenbachiella agariperforans.

Authors:  In-Tae Cha; Yong-Sik Oh; Soo-Je Park; Byoung-Joon Park; Je-Kwan Lee; Chae-Sung Lim; A-Rum Park; Jae-Soo Yoo; Dong-Hun Lee; Sung-Keun Rhee; Dong-Hyun Roh
Journal:  Int J Syst Evol Microbiol       Date:  2010-09-17       Impact factor: 2.747

7.  Dankookia rubra gen. nov., sp. nov., an alphaproteobacterium isolated from sediment of a shallow stream.

Authors:  Wan-Hoe Kim; Do-Hak Kim; Keunsoo Kang; Tae-Young Ahn
Journal:  J Microbiol       Date:  2016-05-27       Impact factor: 3.422

Review 8.  BlastKOALA and GhostKOALA: KEGG Tools for Functional Characterization of Genome and Metagenome Sequences.

Authors:  Minoru Kanehisa; Yoko Sato; Kanae Morishima
Journal:  J Mol Biol       Date:  2015-11-14       Impact factor: 5.469

9.  Draconibacterium orientale gen. nov., sp. nov., isolated from two distinct marine environments, and proposal of Draconibacteriaceae fam. nov.

Authors:  Zong-Jun Du; Ying Wang; Christopher Dunlap; Alejandro P Rooney; Guan-Jun Chen
Journal:  Int J Syst Evol Microbiol       Date:  2014-02-12       Impact factor: 2.747

10.  RefSeq: an update on prokaryotic genome annotation and curation.

Authors:  Daniel H Haft; Michael DiCuccio; Azat Badretdin; Vyacheslav Brover; Vyacheslav Chetvernin; Kathleen O'Neill; Wenjun Li; Farideh Chitsaz; Myra K Derbyshire; Noreen R Gonzales; Marc Gwadz; Fu Lu; Gabriele H Marchler; James S Song; Narmada Thanki; Roxanne A Yamashita; Chanjuan Zheng; Françoise Thibaud-Nissen; Lewis Y Geer; Aron Marchler-Bauer; Kim D Pruitt
Journal:  Nucleic Acids Res       Date:  2018-01-04       Impact factor: 16.971

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.