Literature DB >> 35674967

Formicincola oecophyllae gen. nov. sp. nov., a novel member of the family Acetobacteraceae isolated from the weaver ant Oecophylla smaragdina.

Kah-Ooi Chua1,2, Yvonne Jing Mei Liew3,4, Wah-Seng See-Too2, Jia-Yi Tan2, Hoi-Sen Yong2, Wai-Fong Yin2, Kok-Gan Chan5,6.   

Abstract

In this study, a novel bacterium designated F3b2T was isolated from the gut sample of weaver ant Oecophylla smaragdina and characterised. Strain F3b2T was a Gram-negative, aerobic, non-motile, ovoid-shaped bacterium and grows optimally at 28-30 °C. Its major respiratory quinone is ubiquinone 10 (Q-10) and the major fatty acids are C18:1 ω7c, C19:0 cyclo ω8c and C16:0, representing 85% of the total fatty acids. The 16S rRNA gene sequence of strain F3b2T was highest in similarity to that of Oecophyllibacter saccharovorans DSM106907T and Swingsia samuieinsis NBRC 107927T at 94.35% and 91.96%, respectively. A 16S rRNA gene-based phylogenetic analysis and a core genes-based phylogenomic analysis placed strain F3b2T in a distinct lineage in the family Acetobacteraceae. The phylogenetic placement was supported by lower than species delineation threshold average nucleotide identity (ANI) (≤ 70.2%), in silico DNA-DNA hybridization (DDH) (≤ 39.5%) and average amino acid identity (AAI) (≤ 63.5%) values between strain F3b2T and closest neighbours. These overall genome relatedness indices also supported the assignment of strain F3b2T to a novel genus within Acetobacteraceae. The genome of strain F3b2T was 1.96 Mb with 60.4% G + C DNA content. Based on these results, strain F3b2T represented a novel taxon of Acetobacteraceae, for which we proposed the name Formicincola oecophyllae gen. nov. sp. nov., and strain F3b2T (= LMG 30590T = DSM 106908T = NBRC 113640T = KCTC 62951T) as the type strain.
© 2022. The Author(s), under exclusive licence to Springer Nature Switzerland AG.

Entities:  

Keywords:  Asian weaver ant; Insect; Polyphasic taxonomy; Rhodospirillales; Symbiotic bacterium

Mesh:

Substances:

Year:  2022        PMID: 35674967     DOI: 10.1007/s10482-022-01750-8

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.158


  43 in total

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Authors:  Kah-Ooi Chua; Wah-Seng See-Too; Jia-Yi Tan; Sze-Looi Song; Hoi-Sen Yong; Wai-Fong Yin; Kok-Gan Chan
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10.  Microbial Community Composition Reveals Spatial Variation and Distinctive Core Microbiome of the Weaver Ant Oecophylla smaragdina in Malaysia.

Authors:  Kah-Ooi Chua; Sze-Looi Song; Hoi-Sen Yong; Wah-Seng See-Too; Wai-Fong Yin; Kok-Gan Chan
Journal:  Sci Rep       Date:  2018-07-17       Impact factor: 4.379

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