Literature DB >> 35657525

Quantitative Analysis of Posttranslational Modifications of Plant Histones.

Hana Kuchaříková1, Zuzana Plšková2, Zbyněk Zdráhal1, Miloslava Fojtová1, Pavel Kerchev2, Gabriela Lochmanová3.   

Abstract

Reshaping of the chromatin landscape under oxidative stress is of paramount importance for mounting an effective stress response. Unbiased systemic identification and quantification of histone marks is crucial for understanding the epigenetic component of plant responses to adverse environmental conditions. We describe a detailed method for isolation of plant histones and subsequent bottom-up proteomics approach for characterization of acetylation and methylation status. By performing label-free quantitative mass spectrometry analysis, relative abundances of histone marks can be statistically compared between experimental conditions.
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Acetylation; Arabidopsis; Epigenetics; Histone posttranslational modifications; Histone propionylation; Mass spectrometry; Methylation; Nicotiana; Solanum

Mesh：

Substances：

Year:  2022        PMID： 35657525     DOI： 10.1007/978-1-0716-2469-2_18

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN： 1064-3745


  9 in total

1.  The ROS Wheel: Refining ROS Transcriptional Footprints.

Authors:  Patrick Willems; Amna Mhamdi; Simon Stael; Veronique Storme; Pavel Kerchev; Graham Noctor; Kris Gevaert; Frank Van Breusegem
Journal:  Plant Physiol       Date:  2016-05-31       Impact factor: 8.340

Review 2.  Plant responses to abiotic stress: The chromatin context of transcriptional regulation.

Authors:  María-Amparo Asensi-Fabado; Anna Amtmann; Giorgio Perrella
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2016-07-31       Impact factor: 4.490

3.  Histone Modifications Form Epigenetic Regulatory Networks to Regulate Abiotic Stress Response.

Authors:  Minoru Ueda; Motoaki Seki
Journal:  Plant Physiol       Date:  2019-11-04       Impact factor: 8.340

4.  A practical guide for analysis of histone post-translational modifications by mass spectrometry: Best practices and pitfalls.

Authors:  Sydney P Thomas; Spencer A Haws; Laura E Borth; John M Denu
Journal:  Methods       Date:  2019-12-07       Impact factor: 3.608

Review 5.  Reactive oxygen species, abiotic stress and stress combination.

Authors:  Feroza K Choudhury; Rosa M Rivero; Eduardo Blumwald; Ron Mittler
Journal:  Plant J       Date:  2016-11-01       Impact factor: 6.417

6.  Variations of Histone Modification Patterns: Contributions of Inter-plant Variability and Technical Factors.

Authors:  Sylva Brabencová; Ivana Ihnatová; David Potěšil; Miloslava Fojtová; Jiří Fajkus; Zbyněk Zdráhal; Gabriela Lochmanová
Journal:  Front Plant Sci       Date:  2017-12-07       Impact factor: 5.753

7.  Developmental ROS individualizes organismal stress resistance and lifespan.

Authors:  Daphne Bazopoulou; Daniela Knoefler; Yongxin Zheng; Kathrin Ulrich; Bryndon J Oleson; Lihan Xie; Minwook Kim; Anke Kaufmann; Young-Tae Lee; Yali Dou; Yong Chen; Shu Quan; Ursula Jakob
Journal:  Nature       Date:  2019-12-04       Impact factor: 49.962

8.  Filter-Aided Sample Preparation Procedure for Mass Spectrometric Analysis of Plant Histones.

Authors:  Dominika Ledvinová; Kamil Mikulášek; Hana Kuchaříková; Sylva Brabencová; Miloslava Fojtová; Zbyněk Zdráhal; Gabriela Lochmanová
Journal:  Front Plant Sci       Date:  2018-09-19       Impact factor: 5.753

Review 9.  Accelerating the Field of Epigenetic Histone Modification Through Mass Spectrometry-Based Approaches.

Authors:  Congcong Lu; Mariel Coradin; Elizabeth G Porter; Benjamin A Garcia
Journal:  Mol Cell Proteomics       Date:  2020-12-08       Impact factor: 7.381
  9 in total

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