Literature DB >> 33203747

Accelerating the Field of Epigenetic Histone Modification Through Mass Spectrometry-Based Approaches.

Congcong Lu1, Mariel Coradin2, Elizabeth G Porter1, Benjamin A Garcia3.   

Abstract

Histone post-translational modifications (PTMs) are one of the main mechanisms of epigenetic regulation. Dysregulation of histone PTMs leads to many human diseases, such as cancer. Because of its high throughput, accuracy, and flexibility, mass spectrometry (MS) has emerged as a powerful tool in the epigenetic histone modification field, allowing the comprehensive and unbiased analysis of histone PTMs and chromatin-associated factors. Coupled with various techniques from molecular biology, biochemistry, chemical biology, and biophysics, MS has been used to characterize distinct aspects of histone PTMs in the epigenetic regulation of chromatin functions. In this review, we will describe advancements in the field of MS that have facilitated the analysis of histone PTMs and chromatin biology.
Copyright © 2021 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  crosslinking MS; epigenetic regulation; histone post-translational modification; hydrogen–deuterium exchange MS; mass spectrometry; middle-down proteomics; multi-omics

Mesh:

Substances:

Year:  2020        PMID: 33203747      PMCID: PMC7950153          DOI: 10.1074/mcp.R120.002257

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   7.381


  10 in total

Review 1.  Post-translational modifications in tumor-associated carbonic anhydrases.

Authors:  Anna Di Fiore; Claudiu T Supuran; Andrea Scaloni; Giuseppina De Simone
Journal:  Amino Acids       Date:  2021-08-26       Impact factor: 3.520

2.  Not all Is SET for Methylation: Evolution of Eukaryotic Protein Methyltransferases.

Authors:  Allyson A Erlendson; Michael Freitag
Journal:  Methods Mol Biol       Date:  2022

3.  Histone Acid Extraction and High Throughput Mass Spectrometry to Profile Histone Modifications in Arabidopsis thaliana.

Authors:  Ray Scheid; James A Dowell; Dean Sanders; Jianjun Jiang; John M Denu; Xuehua Zhong
Journal:  Curr Protoc       Date:  2022-08

Review 4.  Phosphoproteomics: a valuable tool for uncovering molecular signaling in cancer cells.

Authors:  Jacqueline S Gerritsen; Forest M White
Journal:  Expert Rev Proteomics       Date:  2021-09-16       Impact factor: 4.250

5.  Quantitative Analysis of Posttranslational Modifications of Plant Histones.

Authors:  Hana Kuchaříková; Zuzana Plšková; Zbyněk Zdráhal; Miloslava Fojtová; Pavel Kerchev; Gabriela Lochmanová
Journal:  Methods Mol Biol       Date:  2022

Review 6.  Post-Translational Modifications of Histones Are Versatile Regulators of Fungal Development and Secondary Metabolism.

Authors:  Aurelie Etier; Fabien Dumetz; Sylvain Chéreau; Nadia Ponts
Journal:  Toxins (Basel)       Date:  2022-04-29       Impact factor: 5.075

Review 7.  Epigenetic, Metabolic, and Immune Crosstalk in Germinal-Center-Derived B-Cell Lymphomas: Unveiling New Vulnerabilities for Rational Combination Therapies.

Authors:  Inna Serganova; Sanjukta Chakraborty; Samuel Yamshon; Yusuke Isshiki; Ryan Bucktrout; Ari Melnick; Wendy Béguelin; Roberta Zappasodi
Journal:  Front Cell Dev Biol       Date:  2022-01-07

Review 8.  Immunoaffinity Capillary Electrophoresis in the Era of Proteoforms, Liquid Biopsy and Preventive Medicine: A Potential Impact in the Diagnosis and Monitoring of Disease Progression.

Authors:  Norberto A Guzman; Daniel E Guzman
Journal:  Biomolecules       Date:  2021-10-01

Review 9.  Role of Histone Deacetylases in T-Cell Development and Function.

Authors:  Monika Pieniawska; Katarzyna Iżykowska
Journal:  Int J Mol Sci       Date:  2022-07-15       Impact factor: 6.208

10.  [Extraction and isolation of histones from paraffin-embedded tissues and quantitative analysis of post-translational modifications].

Authors:  Shanshan Tian; Ranran Liu; Xiaolong Qian; Xiaojing Guo; Kai Zhang
Journal:  Se Pu       Date:  2021-10
  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.