| Literature DB >> 35655204 |
Soudeh Ghafouri-Fard1, Tayyebeh Khoshbakht2, Bashdar Mahmud Hussen3,4, Mohammad Taheri5,6, Nader Akbari Dilmaghani7.
Abstract
PTENP1 is a long non-coding RNA which has been regarded as a pseudogene of the PTEN tumor suppressor gene. However, it has been shown to be a biologically active transcript that can function as a competing endogenous RNA and enhance expression of PTEN protein. This lncRNA has two transcripts, namely PTENP1-202 and PTENP1-202 with sizes of 3996 and 1215 bps, respectively. PTENP1 acts as a sponge for some PETN-targeting miRNAs, such as miR-17, miR-20a, miR-19b, miR-106b, miR-200c, miR-193a-3p, miR-499-5p and miR-214. Besides, it can affect miR-20a/PDCD4, miR-27a-3p/EGR1, miR-17-5p/SOCS6 and miR-19b/TSC1 axes. This long non-coding RNA participates in the pathoetiology of several types of cancers as well as non-malignant conditions such as alcohol-induced osteopenia, insulin resistance, osteoporosis, sepsis-associated cardiac dysfunction and spinal cord injury. In the current review, we elucidate the role of PTENP1 in human disorders, particularly malignant conditions based on evidence acquired from cell line assays, animal studies and investigations on human samples.Entities:
Keywords: Biomarker; Expression; PTENP1; cancer
Year: 2022 PMID: 35655204 PMCID: PMC9161594 DOI: 10.1186/s12935-022-02625-8
Source DB: PubMed Journal: Cancer Cell Int ISSN: 1475-2867 Impact factor: 6.429
Fig. 1Depicts the roles of PTENP1 in bladder cancer, breast cancer and multiple myeloma
Fig. 2Depicts the tumor suppressor roles of PTENP1 in cervical cancer, glioma, hepatocellular carcinoma and oral squamous cell carcinoma
Role of PTENP1 in different cancers according to cell line studies
| Tumor | Interactions | Cell line | Function | References |
|---|---|---|---|---|
| Acute leukemia | PTEN | HL-60 cell line and 293T cells | ↑↑ PTENP1: ↑ PTEN mRNA level without affecting PTEN protein levels and cell growth | [ |
| Bladder cancer | miR-17/PTEN axis | EJ, J82, HEK 293 A | ↑↑ PTENP1: ↓ proliferation, migration, invasion, colony formation, ↑ apoptosis | [ |
| miR-20a/PDCD4 axis | Human bladder cancer cell lines J82 and T24, SV-HUC-1 | ↑↑ miR-20a (a target of PTENP1): ↑ proliferation and migration | [ | |
| Breast cancer | miR-20a/PTEN axis, PI3K/Akt signaling | MDA-MB-231, T-47D and MCF-7 , mammary epithelium MCF-10 A | ↑↑ PTENP1: ↓ proliferation, migration, invasion, colony formation, viability | [ |
| miR-19b/ PTEN axis, p53 and p-AKT | MCF-10 A,BT-20, MCF-7, MDA-MB-231 and T-47D | ↑↑ PTENP1: ↓ proliferation, migration, invasion, ↑ apoptosis ↑ p53 and ↓p-AKT | [ | |
| AKT and MAPK signaling pathways | MCF7, 293T | ↑↑ PTENP1: ↓ proliferation, migration, colony formation, cyclin A2 and CDK2, AKT and MAPK signaling pathways | [ | |
| miR-19b/ PTEN axis and PI3K/Akt Pathway | MCF10A, MCF-7 and MDA-MB-231 | ↑↑ PTENP1: ↓ proliferation, migration, invasion, colony formation, PDK-1, p-PI3K, PI3K, and p-Akt, ↑ apoptosis, PTEN | [ | |
| Cervical cancer | miR-106b/ PTEN axis | HeLa, SiHa, C33A, CasKi, H8 | ↑↑ PTENP1: ↓ proliferation, EMT process, ↑ apoptosis | [ |
| miR-27a-3p/ EGR1 axis | C33A, HeLa, ME-180, SiHa, NC104 | ↑↑ PTENP1: ↓ proliferation, EMT process, motility, ↑ apoptosis | [ | |
| miR-19b/ MTUS1 axis | Human normal cervical epithelium cell (HCvEpC) and human CC cell lines, such as Caski, C33A, SiHa and HeLa cells | ↑↑ PTENP1: ↓ proliferation and invasion | [ | |
| Endometrioid endometrial carcinoma | miR-200c/ PTEN axis and PI3K-AKT pathway | RL-952, Ishikawa, HEC-1B, and JEC | 17β-estradiol (E2) treatment: ↑ proliferation, migration and invasion, miR-200c levels, phospho-PI3K-AKT pathway genes and ↓ PTEN level ∆ ERα: ↓ effects of E2 on miR-200c and PTEN | [ |
| Esophageal carcinoma | miR-17‐5p/ SOCS6 axis, p‐STAT3‐HIF‐1α signal pathway | Eca109, TE-1, HEK‐293T, Het‐1 A | ↑↑ PTENP1: ↓ proliferation, vitality, p-STAT3‐HIF‐1α signal pathway | [ |
| Gastric cancer | miR-106b, miR-93 and PTEN | GES-1, gastric adenocarcinoma cell line AGS, SGC7901, MGC803 and BGC823 | ↑↑ PTENP1: ↓ cell growth, migration, and invasion, ↑ apoptosis | [ |
| Glioma | p21 and p38 signaling pathway. | SHG44 and U251 human glioma cells | ↑↑ PTENP1: ↓ proliferation, migration, and invasion, p38 MAPK signaling pathway, ↑ cell cycle arrest, p21 levels | [ |
| miR-10a-5p/ PTEN axis | Glioma cell line U87 | Co-Culture of hUC-MSCs-derived exosomes suppress the proliferation and stimulate the apoptosis of U87 Cells. Exosomes-Mediated Transfer of LncRNA PTENP1 suppresses Cell Growth by Targeting MiR-10a-5p. | [ | |
| Head and neck squamous cell carcinoma | PTEN | WSU-HN4, HN6, HN13, HN30 and Cal27 | ↑↑ PTENP1: ↓ cell growth, migration, invasion, colony formation | [ |
| Hepatocellular carcinoma | miR-21, TET1/2/3, PTEN | SNU-449, HepG2, Hep3B, Huh7 | ↑↑ miR-21: ↑ proliferation, invasion, ↓ apoptosis, expression of TET1/2/3, change in methylation and expression of PTENp1, ↓ PTENp1 and PTEN | [ |
| miR-193a-3p/ PTEN axis | Sk-Hep-1 and SMMC-7721 | ↑↑ PTENP1: ↓ proliferation, migration, invasion, ↑ apoptosis | [ | |
| miR-17, miR-19b and miR-20a, PTEN, PHLPP, ULK1, ATG7 and p62, ↓ PI3K/AKT pathway | human hepatocytes (HH) and HCC cell line Mahlavu | ↑↑ PTENP1: ↓ proliferation, migration, invasion ↑ autophagy and apoptosis | [ | |
| Multiple myeloma | miR-19b/ TSC1 axis | OPM2 and KMS-11 cells | ↑↑ PTENP1: ↓ miR-19b levels and ↑ proliferation | [ |
| Oral squamous cell carcinoma | miR-21/ PTEN, AKT pathways | SCC-25, Cal-27, and HEK 293 cells and ca-8113, | ↑↑ PTENP1: ↓ proliferation, ↑ cell cycle arrest | [ |
| Renal cell carcinoma | miR21/ PTEN axis | Human renal cell carcinoma cell lines 786-O, ACHN, SN12PM6 and HK-2 | ↑↑ PTENP1: ↓ proliferation and cell growth, migration, invasion, metastasis, and ↑ sensitivity of ccRCC cells to cisplatin and gemcitabine | [ |
BC breast cancer, ccRCC clear-cell renal cell carcinoma, ∆ knock-down or deletion
Role of PTENP1 in different non-malignant conditions according to cell line studies
| Disorders | Interaction | Cell line | Function | References |
|---|---|---|---|---|
| Alcohol-induced osteopenia | PTEN and Akt/GSK3β/β-catenin signaling | Human BMSCs (hBMSCs) | Ethanol treatment: ↑ PTEN and PTENP1 levels and ↓ Akt/GSK3β/β-catenin signaling ∆ PTEN: ↓ ethanol-induced suppression of bone formation and antiosteogenic effect of ethanol | [ |
| Insulin resistance | miR-499-5p/ PTEN axis | Murine liver cell line NCTC1469 | ↑↑ PTEN: ↓ Akt/GSK activation and glycogen synthesis | [ |
| Osteoporosis | miR-214/ PTEN axis, 3 K/AKT/NF-kB signaling pathway | RAW 264.7 macrophages | ↑↑ PTENP1: ↓ ANKL- induced osteoclast differentiation BY inhibiting 3 K/AKT/NF-kB signaling pathway | [ |
| Sepsis-associated cardiac dysfunction | miR-106b-5p | H9C2 | Matrine administration: ↓ expression of PTENP1 and inflammation, ↑ H9C2 viability | [ |
| Spinal cord injury | miR-21, miR-19b and PTEN | SH-SY5Y and U251 cells | ∆ PTENP1: ↑ apoptosis, miR-21, miR-19b and ↓ cell viability | [ |
PTENP1 role in different disorders based on animal studies
| Tumor/ disease type | Animal models | Results | References |
|---|---|---|---|
| Bladder cancer | 5 week-old male nude mice injected with EJ cell lines | ↑↑ PTENP1: ↓ tumor weight, tumor volume and tumor size | [ |
| Esophageal carcinoma | 4 week-old male nude mice injected with Eca109 cells transfected with PTENP1 3′UTR or NC | ↑↑ PTENP1: ↓ tumorigenesis | [ |
| Head and neck squamous cell carcinoma | 4-week-old male nude mice | ↑↑ PTENP1: ↓ tumorigenesis | [ |
| Hepatocellular carcinoma | 4 week-old BALB/c nude mouse | ∆ miR-21: ↓ tumor growth and size, ↑ PTEN, PTENp1, TET1, TET2 and TET3 | [ |
| 4 week-old male immune-deficient nude mice (BALB/c-nu) | ↑↑ PTENP1: ↓ tumor weight and tumor volume | [ | |
| 6-8-weeks-old BALB/c nude mic were injected with Mahlavu cells | ↑↑ PTENP1: ↓ tumor growth, intratumoral cell proliferation, and angiogenesis, ↑ apoptosis, autophagy | [ | |
| Oral squamous cell carcinoma | 5 -week-old female BALB/C nude mice mice were injected with Tca-8113 cells transfected with LV-miR-21 plus LV-PTEN and LV-PTENp1 | ↑↑ PTENP1: ↓ tumorigenesis | [ |
| Renal cell carcinoma | Nude mice were injected with ACHN cells transfected with vector control or PTENP1 | ↑↑ PTENP1: ↑ sensitivity of ccRCC cells to cisplatin and gemcitabine | [ |
| Alcohol-induced osteopenia | 40 8-week-old male specific SPF and SD rats | ∆ PTEN: ↓ ethanol-induced osteopenia | [ |
| Insulin resistance | 5 db/db mice and 5 age-matched wild-type (WT) mice | ↑↑ PTENP1: ↑ hepatic insulin resistance | [ |
| Osteoporosis | 8-week-old female C57BL/6 mice | Levels of PTENP1 and PTEN were down-regulated in CS-F- and RANKL-induced bone marrow mononuclear cell. | [ |
| Spinal cord injury | Rats in sham group and SCI, SCI + exosomes, and SCI + exosomes + PTENP1-shRNA groups | Treatment with exosomes + PTENP1-shRNA: ↓ PTEN expression PTENP1 participates in the recovery of SCI through regulation of miR-19b and miR-21. | [ |
∆ knock-down or deletion, ccRCC clear-cell renal cell carcinoma, SPF specific pathogen-free, SD Sprague–Dawley
Dysregulation of PTENP1 in clinical samples
| Tumor/ disease type | Numbers of clinical samples | Expression | Kaplan-Meier analysis | Polymorphism in PTENP1 associated with Tumor/ disease | Multivariate/ univariate cox regression | Clinicopathologic characteristics of patients | References |
|---|---|---|---|---|---|---|---|
| Acute leukemia | 138 AL patients and 15 healthy controls | Downregulated | [ | ||||
| Bladder cancer | Plasma samples from 50 patients with bladder cancer and 60 normal subjects 20 pairs of tumor tissues and ANTs | Downregulated | High clinical grade | [ | |||
| 60 pairs of tumor tissues and ANTs | Upregulation of miR-20a (a target of PTENP1) | [ | |||||
| Breast cancer | 52 pairs of tumor tissues and ANTs | Downregulated | Poorer OS | Advanced BC stages | [ | ||
| 65 pairs of tumor tissues and ANTs | Downregulated | [ | |||||
| 20 pairs of tumor tissues and ANTs | Downregulated | [ | |||||
| Cervical cancer | 54 pairs of tumor tissues and ANTs | Downregulated | FIGO stage and the lymph node metastasis | [ | |||
| 88 pairs of tumor tissues and ANTs | Downregulated | Poorer OS | Advanced stage, FIGO stage, tumor size and lymph node metastasis | [ | |||
| 56 pairs of tumor tissues and ANTs | Downregulated | Poorer OS | Advanced FIGO stage, metastasis and recurrence | [ | |||
| Endometrioid endometrial carcinoma | 40 pairs of tumor tissues and ANTs GEO database and TGCA database | Downregulated | [ | ||||
| Esophageal carcinoma | GEO database (GSE20347): 17 pairs of tumor tissues and ANTs | Downregulated | [ | ||||
| 93 ESCC patients | Downregulated | Poorer OS | TNM stage and PTENP1 expression were found to be independent factors that influence the OS of patients after radical esophagectomy. | Histological grade, more advanced TNM stage, deep infiltration depth, and lymph node metastasis | |||
| Gastric cancer | 768 GC patients and 768 healthy controls | Downregulated | Patients who had rs7853346 G allele showed a remarkably decreased risk of GC in comparison with those carrying C allele. Samples with rs7853346 CG/GG genotype showed high PTENP1 mRNA expression levels than those with CC genotype. | [ | |||
| Gastric cancer | 36 pairs of tumor tissues and ANTs | Downregulated | Tumor size, clinic stage and invasion depth | [ | |||
| Glioma | 23 gliomas tissue samples | Downregulated | [ | ||||
| 279 glioma patients | Downregulated | Downregulated in patients carrying the CG&GG genotypes of rs7853346 compared with patients carrying the CC genotype of rs7853346 | [ | ||||
| Head and neck squamous cell carcinoma | 57 HNSCC tissues and 27 ANTs | Downregulated | Poorer OS or DFS | PTENP1 level was found to be an independent predictor of the OS and DFS in patients. | History of alcohol use | [ | |
| Hepatocellular carcinoma | 48 pairs of tumor tissues and ANTs | Downregulated | Poorer OS | Tumor size and TNM stage | [ | ||
| 129 patients with HCC, 49 patients with liver cirrhosis, 27 patients with chronic HBV, and 93 normal subjects | Downregulated in HCC than in control groups | [ | |||||
| Multiple myeloma | 43 multiple myeloma patients and 35 healthy controls | Upregulated | Samples with CC genotype showed higher levels of PTENP1 and TSC1 mRNA, and lower level of miR-19b compared to the CG and GG groups. G allele of rs7853346 polymorphism induces the proliferation of cancer stem cells. | [ | |||
| Oral squamous cell carcinoma | 62 pairs of tumor tissues and ANTs | Downregulated | Poorer OS | pT-stage and clinical stage | [ | ||
342 OSCC patients and 711 healthy controls 20 pairs of tumor tissues and ANTs | rs7853346 strongly reduced OSCC risk. | rs7853346 strongly decreased OSCC risk with gender, age, smoking and drinking condition adjusted. | [ | ||||
| Renal cell carcinoma | 40 pairs of tumor tissues and ANTs | Downregulated | [ | ||||
| Osteoporosis | 30 postmenopausal females with osteoporosis and 15 premenopausal females with arthritis (as controls) | Downregulated | [ |
ANTs adjacent non-cancerous tissues, OS overall survival, TNM tumor-node‐metastasis, HCC hepatocellular carcinoma, ESCC esophageal squamous cell carcinoma, HNSCC head and neck squamous cell carcinoma, DFS disease-free survival, AL acute leukemia