| Literature DB >> 35649599 |
Ayesha Sania1, Ahmed Nawsher Alam2, A S M Alamgir3,4, Joanna Andrecka5, Eric Brum5, Fergus Chadwick6, Tasnuva Chowdhury6, Zakiul Hasan5, Davina L Hill6, Farzana Khan7, Mikolaj Kundegorski6, Seonjoo Lee8,9, Mahbubur Rahman7, Yael K Rayport10,11, Tahmina Shirin2, Motahara Tasneem5, Katie Hampson6.
Abstract
OBJECTIVE: To evaluate the diagnostic performance and feasibility of rapid antigen testing for SARS-CoV-2 detection in low-income communities.Entities:
Keywords: COVID-19; diagnostic microbiology; public health
Mesh:
Year: 2022 PMID: 35649599 PMCID: PMC9160589 DOI: 10.1136/bmjopen-2022-060832
Source DB: PubMed Journal: BMJ Open ISSN: 2044-6055 Impact factor: 3.006
Demographic characteristics of the study participants
| Index person (N=1223) | Second household member (N=710) | Third household member (N=283) | Total (N=2216) | ||
| Sex* | Female | 575 (47.0%) | 397 (55.9%) | 151 (53.4%) | 1123 (50.7%) |
| Male | 640 (52.3%) | 312 (43.9%) | 132 (46.6%) | 1084 (48.9%) | |
| Age* | Mean (SD) | 36.522 (14.2) | 36.784 (14.42) | 34.735 (15.4) | 36.377 (14.48) |
*Totals may not add up because of missing values.
Performance of rapid antigen tests compared with RT-PCR, among all index household members tested
| Nasal sample | Saliva sample | |
| PCR +PCR—total | PCR +PCR—total | |
| RAT +198 21 219 | RAT +118 117 235 | |
| RAT—93 911 1004 | RAT—173 815 988 | |
| Total 291 932 1223 | Total 291 932 1223 | |
| Sensitivity | 0.68 (0.62 to 0.73) | 0.41 (0.35 to 0.46) |
| Specificity | 0.98 (0.97 to 0.99) | 0.87 (0.85 to 0.90) |
| PPV | 0.90 (0.86 to 0.94) | 0.50 (0.44 to 0.57) |
| NPV | 0.91 (0.89 to 0.92) | 0.82 (0.80 to 0.85) |
| Accuracy | 0.91 (0.89 to 0.92) | 0.76 (0.74 to 0.79) |
The total sample size was 1223 index subjects, 95% CIs are shown in brackets.
NPV, negative predictive value; PPV, positive predictive value; RAT, rapid antigen test; RT-PCR, Reverse transcription polymerase chain reaction.
Figure 1Sensitivity (left) and specificity (right) of rapid antigen testing compared with RT-PCR, when 1 (index person), 2 or 3 members of the same household are tested. RT-PCR, Reverse Transcription Polymerase Chain Reaction.
Figure 2The percentage of false negative rapid antigen test results given a positive RT-PCR increases with days from self-reported symptom onset. RT-PCR, Reverse Transcription Polymerase Chain Reaction.
Figure 3IEDCR sample collection and testing in Dhaka from May to September 2021. Routine sample collection by IEDCR from low-income communities in Dhaka where the community support teams operate. Sample collections by medical technologists (MT)are shown in grey. The period of rapid antigen testing is indicated, with samples collected for rapid testing in households shown in red (RDT). The subsequent collection of samples by community health workers for RT-PCR testing during the surge of infection driven by the Delta variant is shown in orange. A marked dip in testing in late July corresponded to a religious festival (Eid Al-Adha). IEDCR, Institute of Epidemiology, Disease Control and Research; RDT, rapid antigen test. RT-PCR, Reverse Transcription Polymerase Chain Reaction. CST, Community Support Teams
Figure 4Comparison of positive cases confirmed by rapid antigen testing versus RT-PCR under a specified diagnostic testing budget. We assume that the per cost test of rapid antigen tests (RDT) is US$5 and of RT-PCR is US$30, and the overall testing budget is US$10 000. Modelled results are shown for prevalence of 40% (test positivity exceeded 60% at the peak of the Beta and Delta waves) and of 5% (test positivity rarely dropped below 5% in 2021). Test results are shown based on the estimated rapid antigen test sensitivity and specificity that we reported for testing index cases. RT-PCR, Reverse Transcription Polymerase Chain Reaction.