| Literature DB >> 35649379 |
Yichen Cheng1, Angelica Medina1, Zhenlan Yao2, Mausumi Basu3, Janhavi P Natekar3, Jianshe Lang1, Egan Sanchez1, Mezindia B Nkembo1, Chongchong Xu4, Xuyu Qian5, Phuong T T Nguyen5, Zhexing Wen4, Hongjun Song5, Guo-Li Ming5, Mukesh Kumar3, Margo A Brinton3, Melody M H Li2, Hengli Tang6.
Abstract
Physiological blood-tissue barriers play a critical role in separating the circulation from immune-privileged sites and denying access to blood-borne viruses. The mechanism of virus restriction by these barriers is poorly understood. We utilize induced pluripotent stem cell (iPSC)-derived human brain microvascular endothelial cells (iBMECs) to study virus-blood-brain barrier (BBB) interactions. These iPSC-derived cells faithfully recapitulate a striking difference in in vivo neuroinvasion by two alphavirus isolates and are selectively permissive to neurotropic flaviviruses. A model of cocultured iBMECs and astrocytes exhibits high transendothelial electrical resistance and blocks non-neurotropic flaviviruses from getting across the barrier. We find that iBMECs constitutively express an interferon-induced gene, IFITM1, which preferentially restricts the replication of non-neurotropic flaviviruses. Barrier cells from blood-testis and blood-retinal barriers also constitutively express IFITMs that contribute to the viral resistance. Our application of a renewable human iPSC-based model for studying virus-BBB interactions reveals that intrinsic immunity at the barriers contributes to virus exclusion.Entities:
Keywords: CP: Immunology; CP: Neuroscience; IFITM; Zika virus; blood-brain barrier; blood-retinal barrier; blood-testis barrier; brain microvascular endothelial cell; dengue virus; flavivirus; intrinsic expression; virus-host interactions
Mesh:
Substances:
Year: 2022 PMID: 35649379 PMCID: PMC9230077 DOI: 10.1016/j.celrep.2022.110885
Source DB: PubMed Journal: Cell Rep Impact factor: 9.995
Figure 1.iBMECs exhibit barrier characteristics and respond to inflammation and IFN signaling
(A) Expression of cell-surface markers on iBMECs. Scale bars, 100 μm.
(B) Representative images of vascular tubes formed by the iBMECs. Scale bars, 100 μm.
(C) TEER of cell monolayers on transwells. Measurements were taken 48–72 h after cell seeding.
(D) Sodium fluorescein (Na-F) permeability of iBMECs. Measurements were taken 48–72 h after cell seeding.
(E) Barrier response to LPS (100 ng/mL) and IFN (100 ng/mL). For the LPS and IFN double treatment, LPS was added 48 h after seeding (0 h time point) followed by addition of IFN-λ1 8 h later. TEER measurements were taken at the indicated times. A two-way ANOVA was performed.
(F and G) Monocyte migration rate through (F) the cell monolayers and (G) iBMECs in response to stimuli. THP-1 cells were added to the apical chamber of the transwell 48 h after seeding of iBMECs. In (G), MCP-1 was added to the basolateral chamber and TNF-α to the apical chamber. Quantification of THP-1 cells that reached the basolateral chamber was performed 18 h later.
Values shown as mean ± SD from a minimum of three biological replicates. A one-way ANOVA was performed unless otherwise indicated. Throughout this study, asterisks indicate statistically significant differences (*p ≤ 0.05; **p ≤ 0.01; ***p ≤ 0.001; ****p ≤ 0.0001; ns, no significance).
Figure 2.The iBMECs recapitulate in vivo neuroinvasiveness of alphavirus
(A and B) Fluorescence-activated cell sorting (FACS) profiles and quantification of (A) iBMECs and (B) HUVECs after infection with alphaviruses. Cells were collected for flow cytometry 24 h post infection (hpi). Multiplicity of infection (MOI) = 3.
(C) FACS profile and quantification of iBMECs after infection with SVN mutants. Cells were collected at 24 hpi. MOI = 3.
(D) Virus titer of supernatants collected from iBMECs infected with alphaviruses. Supernatants were collected 24 hpi for titration quantified as plaque-forming units (PFU). MOI = 3..
Values are shown as mean ± SD from two independent infection experiments.
Figure 3.Differential infection of the iBMECs by neurotropic versus non-neurotropic flaviviruses
(A) Representative images of H9-iBMECs infected with DENV-2 (16681) and ZIKVPR at MOI = 1. Cells were fixed at 48 hpi for staining. Scale bars, 100 μm.
(B) Representative western blot images of H9-iBMECs infected with DENV-2 and ZIKVPR at MOI = 1. Cells were lysed at 48 hpi.
(C) Representative images of the H9-iBMECs infected with DENV-2, ZIKVPR, and WNV-NY99 at MOI = 1. Cells were fixed at 48 hpi for staining. Scale bars, 18 μm.
(D and E) Quantification of infection by (D) qRT-PCR and (E) virus titer in Huh7.5 and H9-iBMECs. Cells were infected at MOI = 1, and analysis of (D) intracellular viral RNA and (E) virus production was conducted 48 hpi. Virus titers were quantified as focus-forming units (FFU). Values are mean ± SD from three independent experiments. A two-way ANOVA was performed.
(F) Virus production in IMR-iBMECs infected with flaviviruses. Supernatants from the upper chamber of the transwell were collected at 48 hpi for PFU assay. Values are mean ± SD from three biological replicates. A Student’s t test was performed.
Figure 4.The iBMEC barrier blocks transendothelial infection of CNS cells by non-neurotropic flaviviruses
(A) Virus production by astrocytes exposed to flaviviruses with or without an iBMEC barrier. Astrocytes were cultured in the lower chamber with or without an IMR-iBMEC monolayer for 24 h before virus inoculum (MOIs: ZIKVPR = 1; DENV-2 = 3; YFV = 3) was added to the upper chamber. Supernatants from the lower chamber were collected 48 hpi. Virus titers were quantified as FFU. A Student’s t test was performed.
(B) TEER of IMR-iBMEC monolayers exposed to flaviviruses. TEER from iBMECs in (A) were measured immediately before virus addition (day 1) and every day thereafter. Values were normalized to the day-1 values. A two-way ANOVA was performed.
(C) Effect of TEER reduction by DENV on its access to lower chamber. Left panel: TEER value 1 day after exposure to DENV at MOI = 1. Right panel: titer of DENV produced from the day-1 mock- or DENV-infected cells (left panel, at the onset of TEER decrease) exposed to a second inoculum of DENV at MOI = 1. Finally, the virus was collected 48 h after the second inoculation for titration.
(D) Virus production by astrocytes. Astrocytes were cultured in the lower chamber with the IMR-iBMEC monolayer for 24 h before virus inoculum (MOI = 1) was added to the upper chamber. Supernatants from the lower chamber were collected 48 hpi. Virus titers were quantified as PFU, and values are shown as mean ± SD from three biological replicates. A Student’s t test was performed.
(E) TEER of IMR-iBMEC monolayers exposed to flaviviruses. TEER from iBMECs in (C) were measured immediately before virus addition (day 1) and every day thereafter. Values were normalized to the day-1 values. A two-way ANOVA was performed.
(F) Virus production by organoids with or without an iBMEC barrier. Day-55 organoids were added to the lower chamber with or without an IMR-iBMEC monolayer along with virus inoculum. Supernatants from the lower chamber were collected 48 hpi. Virus titers were quantified as FFU. A Student’s t test was performed.
Figure 5.The iBMECs intrinsically express IFITM1, which restricts DENV but not ZIKV infection
(A) Representative images of mixed culture of H9-iBMECs and Vero cells challenged with DENV-2. Mixed cells were cultured in the same well and fixed at 48 hpi. MOI = 1. Areas of either only Vero cells (top) or a mixed population (bottom) on the same slide are shown. Scale bars, 100 μm.
(B) mRNA expression levels of IFITM1, IFITM2, and IFITM3. Values are shown as mean ± SD from three biological replicates.
(C) Western blot analysis of DENV-2 and ZIKV infection in H9-iBMECs with or without IFITM1KO. Cell lysates were collected at 48 hpi. MOI = 1.
(D and E) Analysis of DENV-2 and ZIKVPR infection in SNB-19 cells that ectopically express IFITM1. Results shown are (D) infection rates and (E) NS1 expression. SNB-19 cells were stably transduced with a GFP-tagged lentiviral vector expressing IFITM1 before infection at MOI = 1. Cells were collected at 24 hpi.
(F and G) Flow cytometry analysis of flavivirus infection of SNB-19 cells with or without IFITM1 expression. SNB-19 cells and IFITM1-expressing single-cell clone C1–3 cells were mixed and plated in the same well for infection at MOI = 1. Cells were stained at 24 hpi. Data shown as (F) representative FACS profiles and (G) infection rate.
(H) DENV RNA level in SNB-19 cells with or without IFITM1. Cells were inoculated with DENV on ice (−2 h) for 2 h before shifting to 37°C (0 h). MOI = 1. Cell pellets were collected at indicated times. Values were normalized to GAPDH and then to the mean values of the −2 h time point. Values are shown as mean ± SD from three biological replicates. A two-way ANOVA was performed.
Figure 6.Primary human SerCs and RMECs constitutively express IFITM proteins and are selectively resistant to DENV infection
(A) mRNA expression of IFITMs.
(B and C) Western blot analysis of protein expression of IFITMs in (B) BTB and (C) BRB cells.
(D) Infection of the three types of barrier cells by DENV-2 and ZIKVPR. Cells were infected at MOI = 1 and collected 48 hpi for staining. Scale bars, 100 μm.
(E and F) Viral production by (E) SerCs and (F) RMECs in comparison with Huh7.5 cells. Supernatants were collected 48 hpi. MOI = 1. Virus titers were quantified as FFUs. A two-way ANOVA was performed.
(G and H) Flow cytometry analysis of DENV-2 infection of (G) SerCs and (H) RMECs cocultured with Huh7.5-GFP cells. SerCs or RMECs were mixed with GFP-tagged Huh7.5 cells and plated in the same well for infection with DENV-2 at MOI = 1. Cells were stained at 48 hpi.
(I) Western blot analysis of IFITM protein expression in IFITM KO SerCs. SerCs were stably transduced with a lentiviral vector expressing guide RNAs targeting either IFITM1 only (IFITM1KO) or all three members of antiviral IFITMs (IFITM123KO).
(J–L) Analysis of DENV-2 infection in SerCs with IFITM KO by (J) western blotting, (K) flow-cytometry-based quantification, and (L) FFU assay. Wild-type or KO cells were infected with DENV-2 at MOI = 1 and collected 48 hpi. A one-way ANOVA was performed.
Values are mean ± SD from three independent experiments.
KEY RESOURCES TABLE
| REAGENT or RESOURCE | SOURCE | IDENTIFIER |
|---|---|---|
| Antibodies | ||
| Mouse monoclonal anti-IFITM1 1:10000 | Proteintech | Cat#60074-1-Ig; RRID:AB_530619 |
| Mouse monoclonal anti-IFITM2 1:2000 | Proteintech | Cat#66137-1-lg; RRID:AB_2881536 |
| Rabbit monoclonal anti-IFITM3 1:5000 | Cell Signaling Technology | Cat#D8E8G; RRID:AB_2799561 |
| Rabbit polyclonal anti-GAPDH 1:50000 | GeneTex | Cat#GTX100118; RRID:AB_1080976 |
| Mouse monoclonal anti-Ku80 1:3000 | Abcam | Cat#ab119935; RRID:AB_10899161 |
| Mouse monoclonal anti-Zika Envelope NS1 2000 | BioFront Technologies | Cat#BF-1176-46-1mg |
| Mouse monoclonal anti-dsRNA antibody, clone J2 | Sigma-Aldrich | Cat#MABE1134; RRID:AB_2819101 |
| Rabbit polyclonal anti-ZO-1 | ThermoFisher | Cat#40-2200; RRID:AB_2533456 |
| Rabbit polyclonal anti-S100B | ThermoFisher | Cat#PA5-87474; RRID:AB_2804180 |
| Rabbit polyclonal anti-GLUT1 | Abcam | Cat#ab15309; RRID:AB_301844 |
| Goat polyclonal anti-ZO-1 | Novus | Cat#NBP1-46111; RRID:AB_10009353 |
| Mouse monoclonal anti-P-glycoprotein | ThermoFisher | Cat#MA5-13854; RRID:AB_10979045 |
| Rabbit polyclonal anti-Claudin 5 | ThermoFisher | Cat#34-1600; RRID:AB_86930 |
| Rabbit polyclonal anti-CD31 | Abcam | Cat#ab28364; RRID:AB_726362 |
| Goat Anti-Rabbit IgG (H+L) secondary antibody, HRP conjugate | Abcam | Cat#Ab6721; RRID:AB_955447 |
| Goat Anti-Mouse IgG (H+L) secondary antibody, HRP conjugate | Abcam | Cat#Ab6789; RRID:AB_955439 |
| Goat Anti-Rabbit IgG (H+L) secondary antibody, Cy3 conjugate | Invitrogen | Cat#A10521; RRID:AB_1500665 |
| Goat Anti-Mouse IgG (H+L) secondary antibody, Cy3 conjugate | Invitrogen | Cat#A10520; RRID:AB_2534029 |
| Goat Anti-Rabbit IgG (whole molecule)-FITC | Sigma-Aldrich | Cat#F0382; RRID:AB_259384 |
| Goat Anti-Mouse IgG (whole molecule)-FITC | Sigma-Aldrich | Cat#F0257; RRID:AB_259378 |
| Bacterial and virus strains | ||
| Dengue Virus (Type 1, strain Hawaii) | BEI resources | Cat#NR-82 |
| Dengue Virus (Type 3, strain MK-594-87) | BEI resources | Cat#NR-3799 |
| Dengue Virus Type 4, H241 | BEI resources | Cat#NR-86 |
| Dengue Virus Type 2, 16681 | Laboratory of Qianjun Li | N/A |
| Zika Virus (strain PRVABC59) | ATCC | Cat#VR-1843 |
| Zika Virus (strain MR766) | ZeptoMetrix | Cat#0810521CF |
| Yellow Fever Virus (strain YFV-17D) | Laboratory of Qianjun Li | N/A |
| West Nile Virus, WNV Eg101 | Hilary Koprowski, Wistar Institute | N/A |
| West Nile Virus, WNV NY99 | Robert Tesh, UTMB, Galveston TX | N/A |
| West Nile Virus, WNV MAD78 | Robert Tesh, UTMB, Galveston TX | N/A |
| Powassan Virus, POWV LB strain | BEI resources | Cat#NR-51181 |
| Usutu Virus, USUV | BEI resources | Cat#NR-51184 |
| Japanese Encephalitis Virus, JEV Nakayama strain | BEI resources | Cat#NR-90 |
| SVN-GFP | Laboratory of Charles M. Rice |
|
| R47-GFP | Laboratory of Charles M. Rice |
|
| SVN | Laboratory of Charles M. Rice | |
| SVNI | Laboratory of Charles M. Rice | |
| Chemicals, peptides, and recombinant proteins | ||
| Vascular cell basal medium | ATCC | Cat#PCS-100-030 |
| Sertoli cell medium complete | ScienCell | Cat#4521 |
| Microvascular endothelial cell growth kit-VEGF | ATCC | Cat#PCS-110-041 |
| Complete classic medium with serum and CultureBoost | Cell systems | Cat#4Z0-500 |
| Attachment Factor | Cell systems | Cat#4Z0-210 |
| Dulbecco’s Modified Eagle Medium/Nutrient Mixture F-12. DMEM: F12 | Invitrogen | Cat#11330032 |
| Corning® Matrigel® Growth Factor Reduced (GFR) Basement Membrane Matrix | Corning | Cat#354230 |
| Astrocyte medium complete | ScienCell | Cat#1801 |
| Neurobasal medium | GIBCO | Cat#21103049 |
| Poly-L-Lysine | ScienCell | Cat#0403 |
| Poly-D-lysine hydrobromide | Sigma-Aldrich | Cat#P6407 |
| Trypsin/EDTA Solution | Gibco | Cat#R001100 |
| mTESR1 | STEMCELL Technologies | Cat#85857 |
| Knockout Serum Replacer | Gibco | Cat#10828028 |
| MEM nonessential amino acids | Gibco | Cat#11140050 |
| L-glutamine | Gibco | Cat#25030149 |
| β-mercaptoethanol | Gibco | Cat#31350010 |
| human basic fibroblast growth factor (bFGF) | STEMCELL Technologies | Cat#78003 |
| Retinoic Acid (RA) | Sigma-Aldrich | Cat#R2625 |
| human Endothelial Serum-Free Media | Gibco | Cat#11111044 |
| Antibiotic-Antimycotic: Streptomycin, Amphotericin B and Penicillin | Gibco | Cat#15240062 |
| Normal Goat Serum | ThermoFisher Scientific | Cat#10000C |
| Fibronectin from human plasma | Sigma-Aldrich | Cat#F1056 |
| Collagen type I, Rat tail | Sigma-Aldrich | Cat#08-115 |
| N2 Supplement | GIBCO | Cat#17502048 |
| B27 Supplements | GIBCO | Cat#17504044 |
| Recombinant Human VEGF | R&D system | Cat#293-VE-010/CF |
| Recombinant Human CCL2/MCP-1 Protein | Novus | Cat#279-MC-010 |
| Recombinant Human TNF-alpha Protein | Novus | Cat#NBP2-35076-10ug |
| Ascorbic Acid | Sigma | Cat#1043003 |
| StemPro™ Accutase™ Cell Dissociation Reagent | Gibco | Cat#A1110501 |
| ROCK Inhibitor Y-27632 | STEMCELL Technologies | Cat#72304 |
| Dimethyl Sulfoxide (DMSO) | Sigma-Aldrich | Cat#D8418 |
| Paraformaldehyde | Sigma-Aldrich | Cat#158127 |
| Methyl cellulose | Sigma-Aldrich | Cat#M0512 |
| Triton-X-100 | Sigma-Aldrich | Cat#T8787 |
| Bovine serum albumin (BSA) | Sigma-Aldrich | Cat#A7906 |
| Tween-20 | Fisher BioReagents | Cat#BP337500 |
| Agarose, molecular biology grade | Fisher BioReagents | Cat#BP16525 |
| Lipofectamine 2000 | ThermoFisher | Cat#11668019 |
| Polybrene | Santa Cruz animal health | Cat#sc-134220 |
| VECTASHIELD mounting medium for fluorescence | Vector Laboratories | Cat#H-1200; RRID:AB_2336790 |
| ProLong Gold antifade mountant | ThermoFisher | Cat# P10144 |
| Hoechst 33258, Pentahydrate | ThermoFisher | Cat# H1398 |
| DAB substrate kit | Vector Laboratories | Cat#SK-4100; RRID:AB_2336382 |
| Immobilon Western chemiluminescent HRP substrate | Millipore | Cat#WBKLS0500 |
| Sp6 RNA polymerase | NEB | Cat#M0207S |
| SacI-HF | NEB | Cat#R3156S |
| ClaI | NEB | Cat#R0197S |
| AatII | NEB | Cat#R0117S |
| BsHII | NEB | Cat#R0199S |
| Human brain microvascular endothelial cell lysate | ScienCell | Cat#1006 |
| Sodium Citrate Dihydrate | Fisher Scientific | Cat#BP327-500 |
| Brain Cerebral Cortex Tissue Slides (Adult Normal) | Novus Biologicals | Cat#NBP2-77755 |
| Rhodamine 123 | Sigma | Cat#R8004 |
| Cyclosporin A | Sigma | Cat#SML1018 |
| Critical commercial assays | ||
| Human cytokine array/chemokine array 65-plex panel | Eve Technologies | Cat#HD65 |
| QuikChange lightning site-directed mutagenesis kit | Agilent | Cat#210519 |
| Zero Blunt PCR Cloning Kit | ThermoFisher | Cat# 450245 |
| Superscript III First-Strand Synthesis System | Life Technologies | Cat#18080051 |
| RNeasy plus mini kit | QIAGEN | Cat#74134 |
| Experimental models: Cell lines | ||
| hESCs (H9) | WiCell – University Wisconsin-Madison | WA09; RRID:CVCL_9773 |
| iPS(IMR90) clone #4 | WiCell – University Wisconsin-Madison | iPS(IMR90)-4; RRID:CVCL_C437 |
| iPSC DF19–9-11T.H | WiCell – University Wisconsin-Madison | iPS DF19-9-11T.H; RRID:CVCL_K054 |
| Forebrain organoids | Laboratory of Guo-Li Ming | |
| Human neural progenitor cells (hNPCs) | Laboratory of Zhexing Wen |
|
| THP-1 | ATCC | Cat#TIB-202; RRID:CVCL_0006 |
| HEK293 | ATCC | Cat#CRL-1573; RRID:CVCL_0045 |
| Vero | ATCC | Cat#CCL-81; RRID:CVCL_0059 |
| SNB-19 | Laboratory of David Meckes | NCI-60 Human Cancer Cell Line Screen |
| Huh7.5 | Laboratory of Charles M. Rice |
|
| C6/36 | ATCC | Cat# CRL-1660 |
| hCMEC/D3 | Laboratory of Ren Sun |
|
| Primary Umbilical Vein Endothelial Cells (HUVEC), passage 2 – 6 | ATCC | Cat#PCS-100-013 |
| Primary human Sertoli cells, passage 2 – 6 | ScienCell | Cat#4520 |
| Primary human retinal microvascular endothelial cells (RMEC), passage 4 – 6 | Cell systems | Cat#ACBRI 181 |
| Primary human retinal epithelial (RPE) cells, passage 2 – 4 | Lonza | Cat#00194987 |
| Human Astrocytes-midbrain | ScienCell | Cat#1850 |
| Human Primary Astrocytes | ScienCell | Cat#1800 |
| Oligonucleotides | ||
| Forward primer for cloning IFITM1 (5′−3′): TATGGATCCA TGCACAAGGAGGAACATGA | This paper | N/A |
| Reverse primer for cloning IFITM1 (5′−3′): AAGGAATTCCT AGTAACCCCGTTTTTCCT | This paper | N/A |
| gRNA-IFITM1: TGATCACGGTGGACCTTGGA | This paper | N/A |
| gRNA-IFITM123: TCTAGGGACAGGAAGATGGT | This paper | N/A |
| Primers for Alphaviruses mutagenesis, see | This paper | N/A |
| Primers for RT-qPCR, see | This paper | N/A |
| Recombinant DNA | ||
| pUltra |
| Addgene plasmid #24129 |
| lentiCRISPR v2 |
| Addgene plasmid #52961 |
| Software and algorithms | ||
| ImageJ (Fiji) | NIH | ImageJ, RRID:SCR_003070 |
| Adobe Photoshop (CC) | Adobe | Adobe Photoshop, RRID: SCR_014199 |
| GraphPad Prism | GraphPad | GraphPad Prism, RRID: SCR_002798 |
| Flowjo |
| Tre Star; FlowJo RRID: SCR_008520 |
| Other | ||
| 4-chip disposable hemocytometer | Bulldog Bio | Cat#DHC-N404 |
| Corning® Transwell® polycarbonate membrane cell culture inserts | Corning | Cat#CLS3401 |
| Corning® Transwell® polyester membrane cell culture inserts | Corning | Cat#CLS3460 |
| Epithelial Volt/Ohm (TEER) Meter (EVOM2) | World Precision Instruments | Cat#EVOM2 |
| SpinΩ 12-well Spinning Bioreactor | N/A | |
| Cuvettes Plus™ Electroporation Cuvettes, BTX™, 2mm gap, 400 ul | BTX | Cat#58017-895 |