Literature DB >> 35649263

Genome Mining and Metabolomics Unveil Pseudonochelin: A Siderophore Containing 5-Aminosalicylate from a Marine-Derived Pseudonocardia sp. Bacterium.

Fan Zhang1, René F Ramos Alvarenga1, Kurt Throckmorton2, Shaurya Chanana1, Doug R Braun1, Jen Fossen3, Miao Zhao3, Sue McCrone4, Mary Kay Harper5, Scott R Rajski1, Warren E Rose4, David R Andes3, Michael G Thomas2, Tim S Bugni1.   

Abstract

Pseudonochelin (1), a siderophore from a marine-derived Pseudonocardia sp. bacterium, was discovered using genome mining and metabolomics technologies. A 5-aminosalicylic acid (5-ASA) unit, not previously found in siderophore natural products, was identified in 1. Annotation of a putative psn biosynthetic gene cluster combined with bioinformatics and isotopic enrichment studies enabled us to propose the biosynthesis of 1. Moreover, 1 was found to display in vitro and in vivo antibacterial activity in an iron-dependent fashion.

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Year:  2022        PMID: 35649263      PMCID: PMC9270686          DOI: 10.1021/acs.orglett.2c01408

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.072


  37 in total

1.  Clinker & clustermap.js: Automatic generation of gene cluster comparison figures.

Authors:  Cameron L M Gilchrist; Yit-Heng Chooi
Journal:  Bioinformatics       Date:  2021-01-18       Impact factor: 6.937

2.  Analyses of MbtB, MbtE, and MbtF suggest revisions to the mycobactin biosynthesis pathway in Mycobacterium tuberculosis.

Authors:  Matthew D McMahon; Jason S Rush; Michael G Thomas
Journal:  J Bacteriol       Date:  2012-03-23       Impact factor: 3.490

3.  Migration of deuterium during hydroxylation of aromatic substrates by liver microsomes. I. Influence of ring substitutents.

Authors:  J Daly; D Jerina; B Witkop
Journal:  Arch Biochem Biophys       Date:  1968-11       Impact factor: 4.013

4.  Oxachelin, a novel iron chelator and antifungal agent from Streptomyces sp. GW9/1258.

Authors:  Bernd Sontag; Martin Gerlitz; Thomas Paululat; Hans-Falk Rasser; Iris Grün-Wollny; Friedrich G Hansske
Journal:  J Antibiot (Tokyo)       Date:  2006-10       Impact factor: 2.649

5.  Folate synthesis in plants: the p-aminobenzoate branch is initiated by a bifunctional PabA-PabB protein that is targeted to plastids.

Authors:  Gilles J C Basset; Eoin P Quinlivan; Stéphane Ravanel; Fabrice Rébeillé; Brian P Nichols; Kazuo Shinozaki; Motoaki Seki; Lori C Adams-Phillips; James J Giovannoni; Jesse F Gregory; Andrew D Hanson
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-26       Impact factor: 11.205

6.  A multi-standard approach for GIAO (13)C NMR calculations.

Authors:  Ariel M Sarotti; Silvina C Pellegrinet
Journal:  J Org Chem       Date:  2009-10-02       Impact factor: 4.354

7.  Microbial strain prioritization using metabolomics tools for the discovery of natural products.

Authors:  Yanpeng Hou; Doug R Braun; Cole R Michel; Jonathan L Klassen; Navid Adnani; Thomas P Wyche; Tim S Bugni
Journal:  Anal Chem       Date:  2012-05-03       Impact factor: 6.986

8.  Structure and biosynthesis of amychelin, an unusual mixed-ligand siderophore from Amycolatopsis sp. AA4.

Authors:  Mohammad R Seyedsayamdost; Matthew F Traxler; Shao-Liang Zheng; Roberto Kolter; Jon Clardy
Journal:  J Am Chem Soc       Date:  2011-07-07       Impact factor: 15.419

9.  hcapca: Automated Hierarchical Clustering and Principal Component Analysis of Large Metabolomic Datasets in R.

Authors:  Shaurya Chanana; Chris S Thomas; Fan Zhang; Scott R Rajski; Tim S Bugni
Journal:  Metabolites       Date:  2020-07-21

10.  Discovery of cahuitamycins as biofilm inhibitors derived from a convergent biosynthetic pathway.

Authors:  Sung Ryeol Park; Ashootosh Tripathi; Jianfeng Wu; Pamela J Schultz; Isaiah Yim; Thomas J McQuade; Fengan Yu; Carl-Johan Arevang; Abraham Y Mensah; Giselle Tamayo-Castillo; Chuanwu Xi; David H Sherman
Journal:  Nat Commun       Date:  2016-02-16       Impact factor: 14.919

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