| Literature DB >> 35646138 |
Z Chang1,2, Yu-Chun Wang1,2, Danfeng Tian2, Wen-Yue Hu2, Zhen-Yi Wang2, Gan-Lu Liu2, Hua-Ping Ma2,3, Yu-Li Hu2,3, Bin Wu2,3, Zhen-Yun Han3.
Abstract
Background: Although traditional Chinese medicine (TCM) has good efficacy in the treatment of mild cognitive impairment (MCI), especially memory improvement and safety, its substance basis and intervention mechanism are particularly complex and unknown. Therefore, based on network pharmacology and data mining, this study aims to explore the rules, active ingredients and mechanism of TCM in the treatment of MCI.Entities:
Year: 2022 PMID: 35646138 PMCID: PMC9132671 DOI: 10.1155/2022/2478940
Source DB: PubMed Journal: Evid Based Complement Alternat Med ISSN: 1741-427X Impact factor: 2.650
Figure 1The overall flow chart of this study based on network pharmacology and data mining.
Information of potential MCI-related targets.
| Gene symbol | Uniprot ID | Protein name | |
|---|---|---|---|
| 1 | IL6 | P05231 | Interleukin-6 |
| 2 | BACE1 | P56817 | Beta-secretase 1 |
| 3 | IL1B | P01584 | Interleukin-1 beta |
| 4 | TNF | P01375 | Tumor necrosis factor |
| 5 | ADIPOQ | Q15848 | Adiponectin |
| 6 | RUNX1T1 | Q06455 | Protein CBFA2T1 |
| 7 | ACHE | P22303 | Acetylcholinesterase |
| 8 | SOD1 | P00441 | Superoxide dismutase [Cu–Zn] |
| 9 | SLC6A3 | Q01959 | Sodium-dependent dopamine transporter |
| 10 | HMOX1 | P09601 | Heme oxygenase 1 |
| 11 | IL10 | P22301 | Interleukin-10 |
| 12 | MTOR | P42345 | Serine/threonine-protein kinase mTOR |
| 13 | HTT | P42858 | Huntingtin |
| 14 | NOS3 | P29474 | Nitric oxide synthase, endothelial |
| 15 | COL1A2 | P08123 | Collagen alpha-2(I) chain |
| 16 | GLB1 | P16278 | Beta-galactosidase |
| 17 | DPP4 | P27487 | Dipeptidy peptidase 4 |
| 18 | TP53 | P04637 | Cellular tumor antigen p53 |
| 19 | VEGFA | P15692 | Vascular endothelial growth factor A |
| 20 | ADRB1 | P08588 | Beta-1 adrenergic receptor |
| 21 | ADRB2 | P07550 | Beta-2 adrenergic receptor |
| 22 | ADRA1A | P35348 | Alpha-1A adrenergic receptor |
| 23 | CYP3A4 | P08684 | Cytochrome P450 3A4 |
| 24 | ADRA2C | P18825 | Alpha-2C adrenergic receptor |
| 25 | ADRA2B | P18089 | Alpha-2B adrenergic receptor |
| 26 | ADRA2A | P08913 | Alpha-2A adrenergic receptor |
| 27 | ADRA1D | P25100 | Alpha-1D adrenergic receptor |
| 28 | ADRA1B | P35368 | Alpha-1B adrenergic receptor |
Figure 2Target-component networks.
Figure 3Top 10 herbs in the target-ingredient-herb network.
Information of the potential core components (degree ≥ 12).
| Mol ID | Mol name | Degree | OB | DL |
|---|---|---|---|---|
| MOL000358 | Beta-sitosterol | 246 | 36.91 | 0.75 |
| MOL000098 | Quercetin | 201 | 46.43 | 0.28 |
| MOL000422 | Kaempferol | 139 | 41.88 | 0.24 |
| MOL000449 | Stigmasterol | 138 | 43.83 | 0.76 |
| MOL000006 | Luteolin | 98 | 36.16 | 0.25 |
| MOL000354 | Isorhamnetin | 42 | 49.60 | 0.31 |
| MOL002773 | Beta-carotene | 31 | 37.18 | 0.58 |
| MOL004328 | Naringenin | 24 | 59.30 | 0.21 |
| MOL001689 | Acacetin | 24 | 34.97 | 0.24 |
| MOL000392 | Formononetin | 23 | 69.67 | 0.21 |
| MOL000546 | Diosgenin | 18 | 80.88 | 0.81 |
| MOL000296 | Hederagenin | 17 | 36.91 | 0.75 |
| MOL001439 | Arachidonic acid | 16 | 45.57 | 0.20 |
| MOL002881 | Diosmetin | 16 | 31.14 | 0.27 |
| MOL000173 | Wogonin | 15 | 30.68 | 0.23 |
| MOL003044 | Chryseriol | 15 | 35.85 | 0.27 |
| MOL001749 | zinc03860434 | 15 | 43.59 | 0.35 |
| MOL002879 | Diop | 15 | 43.59 | 0.39 |
| MOL001941 | Ammidin | 14 | 34.55 | 0.22 |
| MOL002714 | Baicalein | 14 | 33.52 | 0.20 |
| MOL002322 | Isovitexin | 13 | 31.29 | 0.71 |
| MOL000787 | Fumarine | 13 | 59.26 | 0.83 |
| MOL001454 | Berberine | 13 | 36.86 | 0.78 |
| MOL000471 | Aloe-emodin | 12 | 83.38 | 0.24 |
| MOL001735 | Dinatin | 12 | 30.97 | 0.27 |
| MOL000217 | (s)-Scoulerine | 12 | 32.28 | 0.54 |
| MOL005406 | Atropine | 12 | 45.97 | 0.19 |
| MOL000785 | Palmatine | 12 | 64.60 | 0.65 |
Figure 4Target-component-herbal network diagram.
Figure 5Top 10 herbs in the target-herb network.
The properties and taste of herbs.
| Flavor | Frequency | Proportion (%) | Properties | Frequency | Proportion (%) |
|---|---|---|---|---|---|
| Bitter | 4140 | 33.47 | Warm | 1975 | 24.90 |
| Pungent | 3154 | 25.50 | Cold | 1806 | 22.77 |
| Sweet | 2752 | 22.25 | Mild-natured | 1514 | 19.09 |
| Astringent | 643 | 5.20 | Slight cold | 1152 | 14.52 |
| Slightly bitter | 576 | 4.66 | Cool | 754 | 9.50 |
| Sour | 537 | 4.34 | Slight warm | 494 | 6.23 |
| Salty | 222 | 1.79 | Hot | 208 | 2.62 |
| Light | 173 | 1.40 | Great cold | 25 | 0.32 |
| Slightly pungent | 80 | 0.65 | Great hot | 4 | 0.05 |
| Slightly sweet | 65 | 0.52 | |||
| Slightly sour | 28 | 0.22 |
Figure 6The meridian distribution of herbs.
Figure 7Heatmap of the molecular docking results.
Figure 8Diagram of the molecular docking patterns between the components and core targets. (a) ADRA1B-Stigmasterol; (b) DPP4-kaempferol; (c) ADRA1B-beta-sitosterol; (d) ADRB2-Stigmasterol; (e) ADRB2-beta-sitosterol; (f) ADRA1D-diosgenin; (g) ADRA1D-beta-sitosterol; (h) ADRA1D-Stigmasterol; (i) ADRA1D-hederagenin; (j) ACHE-diosgenin.