| Literature DB >> 35645709 |
Yueyao Chen1, Zhongxian Pan1, Fanqi Meng1, Zhujing Li1, Yuanming Hu1, Xuewen Yu2, Jinyun Gao1, Yihao Guo3, Hanqing Lyu1, Xiaofeng Lin4.
Abstract
Objectives: To compare the performances of single-shot echo-planar imaging (SS-EPI) and readout-segmented echo-planar imaging (RS-EPI) for diffusion tensor imaging (DTI) of the rat sciatic nerve.Entities:
Keywords: diffusion tensor imaging; magnetic resonance imaging; peripheral nerve; readout-segmented echo-planar imaging; single-shot echo-planar imaging
Year: 2022 PMID: 35645709 PMCID: PMC9133884 DOI: 10.3389/fnins.2022.844408
Source DB: PubMed Journal: Front Neurosci ISSN: 1662-453X Impact factor: 5.152
Sequence parameters for single-shot and readout-segmented echo-planar imaging.
| Sequence parameter | Single-shot echo-planar imaging (SS-EPI) | Readout-segmented echo-planar imaging (RS-EPI) |
| Diffusion mode | MDDW | MDDW |
| Diffusion directions | 20 | 20 |
| Diffusion schema | Monopolar | Monopolar |
| 0, 800 | 0, 800 | |
| Fat suppression | fat saturation | fat saturation |
| Repetition time (ms) | 3,500 | 4,000 |
| Echo time (ms) | 72 | 58 |
| Field of view (mm2) | 70 × 70 | 70 × 70 |
| Voxel size (mm2) | 0.7 × 0.7 | 0.7 × 0.7 |
| Slice thickness (mm) | 1.5 | 1.5 |
| Matrix | 100 × 100 | 100 × 100 |
| No. of sections | 20 | 20 |
| Section thickness (mm) | 1.5 | 1.5 |
| Intersection gap (%) | 0 | 0 |
| Phase-encoding direction | Anteroposterior | Anteroposterior |
| Echo spacing (ms) | 1.13 | 0.54 |
| No. of readout segments | 1 | 7 |
| Acquisiton time (min:s) | 4:06 | 14:12 |
FIGURE 1MRI images. (A–L) The transverse DTI images of the rat sciatic nerve in SS–DTI and RS–DTI showing different image qualities. All DTI images derived from SS–DTI had better quality than that from RS–DTI. Artifacts of the ventral and dorsal side for SS–DTI were slightly more obvious. (M) T2WI coronal view displayed the morphology of bilateral sciatic nerves. (N,O) DTT: SS–EPI DTI can generate more fibers compared with RS–EPI DTI. They displayed a more condensed bundle and realistic architecture. Conversely, fibers generated by RS–EPI DTI were sparse and discrete, some of which were deviated and in random order. R, right hind limb; L, left hind limb; AP, phase encoding direction. Scale: 5 mm.
FIGURE 5(A) Toluidine blue myelin staining of the sciatic nerves (×1,000). Scale: 20 μm. (B) Toluidine blue myelin staining were analyzed by ImageJ software to determine the quantitative pathological parameters including POAA: percentage of axon area, POMA: percentage of myelin area, TOM: thickness of myelin, and DOMF: diameter of myelinated fibers. (C,D) Heatmaps of Correlation between DTI parameters and histopathological parameters. The number in each circle represents the correlation coefficients (r-value) between the corresponding parameters. The overall correlation coefficients between SS–EPI DTI parameters and histopathological parameters (C) were superior to the correlation coefficients between RS–EPI DTI parameters and histopathological parameters (D).
Comparisons of image quality scores and inter-observer agreements between SS–EPI and RS–EPI.
| Image quality evaluation | Reader 1 | Reader 2 | Kappa (95%CI) | ||
| SS-EPI/RS-EPI Median (range) | SS-EPI/RS-EPI Median (range) | ||||
| Sharpness of the nerve margin | 3 (3–3)/2 (1–2) | 0.008 | 3 (2–3)/2 (1–2) | 0.008 | 0.837 (0.626–1.000) |
| Artifacts of the nerve | 3 (3–3)/1 (1–2) | 0.008 | 3 (3–3)/1 (1–2) | 0.007 | 0.937 (0.817–1.000) |
| Artifacts of the femur | 2 (1–3)/3 (2–3) | 0.257 | 2 (1–3)/2.5 (2–3) | 0.414 | 0.899 (0.703–1.000) |
| Artifacts of the ventral muscles | 2 (1–3)/3 (3–3) | 0.024 | 2 (1–3)/3 (2–3) | 0.023 | 0.921 (0.766–1.000) |
| Artifacts of the dorsal muscles | 1 (1–2)/3 (2–3) | 0.010 | 1 (1–2)/2.5 (2–3) | 0.015 | 0.862 (0.684–1.000) |
| Homogeneity of the neuromuscular region | 3 (2–3)/1.5 (1–2) | 0.007 | 2.5 (2–3)/1.5 (1–2) | 0.011 | 0.920 (0.766–1.000) |
Data are listed for both readers as reader1/reader 2.
Two independent readers rated the parameters on a scale from 1 (low) to 3 (high).
SS-EPI, single-shot echo-planar imaging; RS-EPI, readout-segmented echo-planar imaging; CI, confidence interval.
*P ≤ 0.05.
FIGURE 2Score of image quality in both SS–EPI and RS–EPI. The chart showed the image quality scores rated by reader 1 (the more senior radiologist). The image quality scores of SS–EPI were significantly higher than those of RS–EPI.
FIGURE 3Box plot comparing the CNR (b = 800 s/mm2) of SS–EPI and RS–EPI. The CNR of SS–EPI was significantly higher than that of RS–EPI (P < 0.001).
FIGURE 4Violin plot comparing the DTI parameters of SS–EPI and RS–EPI. (A) The FA of SS–EPI was significantly higher than that of RS–EPI. (B) The RD of SS-EPI was significantly lower than that of RS–EPI. (P < 0.001). (C,D) There was no significant difference between SS–EPI and RS–EPI for ADC and AD (P > 0.05).
Correlation coefficients between DTI parameters and histopathological parameters.
| FA | RD | AD | ADC | |||||||||
| SS-EPI | RS-EPI | SS-EPI | RS-EPI | SS-EPI | RS-EPI | SS-EPI | RS-EPI | |||||
| POAA | 0.913 ( | 0.897 (0.003*) | 0.853 | −0.898 (0.002*) | −0.691 (0.058) | 0.158 | −0.298 (0.474) | −0.226 (0.591) | 0.916 | −0.769 (0.026*) | −0.232 (0.581) | 0.214 |
| POMA | 0.952 (<0.001*) | 0.769 (0.026*) | 0.077 | −0.948 (<0.001*) | −0.812 (0.014*) | 0.160 | −0.415 (0.307) | −0.082 (0.847) | 0.631 | −0.753 (0.031*) | −0.193 (0.647) | 0.208 |
| TOM | 0.963 (<0.001*) | 0.741 (0.036*) | 0.027 | −0.944 (<0.001*) | −0.709 (0.049*) | 0.050 | −0.377 (0.357) | −0.089 (0.834) | 0.681 | −0.738 (0.037*) | −0.144 (0.734) | 0.196 |
| DOMF | 0.923 (0.001*) | 0.623 (0.099) | 0.036 | −0.886 (0.003*) | −0.716 (0.046*) | 0.245 | −0.400 (0.326) | 0.005 (0.990) | 0.566 | −0.686 (0.060) | −0.073 (0.863) | 0.209 |
The independent P-value is the result of comparison of correlated correlations. The P-value in parentheses is the result of correlation.
DTI, Diffusion tensor imaging; FA, fractional anisotropy; RD, radial diffusivity; AD, axial diffusivity; ADC, apparent diffusion coefficient; SS-EPI, single-shot echo-planar imaging; RS-EPI, readout-segmented echo-planar imaging; POAA, percentage of axon area; POMA, percentage of myelin area; TOM, thickness of myelin; DOMF, diameter of myelinated fiber.
*P ≤ 0.05.