| Literature DB >> 35626411 |
Weiming Tang1,2, Yusha Tao1,2, Emmanuel Fajardo3, Elena Ivanova Reipold4, Roger Chou5, Joseph D Tucker1,2, Philippa Easterbrook3.
Abstract
Despite the widespread availability of curative treatment with direct-acting antivirals, a significant proportion of people with HCV remain undiagnosed and untreated. New point-of-care (PoC) HCV RNA assays that can be used in clinical settings may help expand access to testing and treatment. This study aimed to evaluate the diagnostic performance of PoC HCV viral load assays compared to laboratory-based testing.Entities:
Keywords: diagnostic accuracy; hepatitis c; point-of-care; viral load testing
Year: 2022 PMID: 35626411 PMCID: PMC9141110 DOI: 10.3390/diagnostics12051255
Source DB: PubMed Journal: Diagnostics (Basel) ISSN: 2075-4418
Figure 1* Consider, if feasible to do so, reporting the number of records identified from each database or register searched (rather than the total number across all databases/registers). ** If automation tools were used, indicate how many records were excluded by a human and how many were excluded by automation tools. From: http://www.prisma-statement.org/ (accessed on 1 September 2021).
Figure 2Geographic distribution of countries from 25 studies included within the review (shaded in red). WHO regions: Africa—Cameroon (n = 3), Nigeria (n = 1), Senegal (n = 1), South Africa (n = 1), and Tanzania (n = 1). Americas—the United States (n = 2). Europe—Belgium (n = 1), France (n = 2), Georgia (n = 4), Greece (n = 1), Italy (n = 1), Spain (n = 1), Switzerland (n = 1), UK (n = 1), and Ukraine (n = 2). South-east Asia—India (n = 3), Indonesia (n = 2), and Thailand (n = 1). West Pacific—Australia (n = 4), Cambodia (n = 1), and Malaysia (n = 1).
Figure 3Quality assessment of Diagnostic Accuracy Studies 2 (QUADAS-2) study quality summary.
Figure 4(a) Meta–analysis of diagnostic accuracy (sensitivity and specificity) for point–of–care HCV RNA assays for the diagnosis of chronic HCV infection (62 data sets from 25 studies). (b) Meta–analysis of diagnostic accuracy (sensitivity and specificity) for point–of–care HCV RNA assays for the diagnosis of chronic HCV infection (Xpert HCV Viral Load) (13 data sets from 12 studies). (c) Meta–analysis of diagnostic accuracy (sensitivity and specificity) for point–of–care HCV RNA assays for the diagnosis of chronic HCV infection (Xpert HCV VL Fingerstick) (25 data sets from 6 studies). (d) Meta–analysis of diagnostic accuracy (sensitivity and specificity) for point–of–care HCV RNA assays for the diagnosis of chronic HCV infection (Genedrive HCV ID kit) (11 data sets from 6 studies). (e) Meta–analysis of diagnostic accuracy (sensitivity and specificity) for point–of–care HCV RNA assays for the diagnosis of chronic HCV infection (Truenat and SAMBA) (13 data sets from 3 studies).
Summary of characteristics of the 25 included diagnostic performance studies of PoC HCV viral load assays (Gene Xpert, Genedrive, Truenat, and SAMBA).
| Xpert HCV Viral Load ( | Genedrive HCV ID Kit ( | Truenat and SAMBA ( | |
|---|---|---|---|
|
| 2017–2021 | 2018–2021 | 2019–2021 |
|
| |||
| European region | 7 (35.0%, 1764) 1 | 3 (33.3%, 1707) 2 | 2 (40.0%, 672) 3 |
| Western Pacific region | 6 (30.0%, 1139) | 0 (0.0%, 0) | 0 (0.0%, 0) |
| Americas region | 2 (10.0%, 816) | 0 (0.0%, 0) | 0 (0.0%, 0) |
| South-East Asian region | 3 (15.0%, 451) | 1 (11.1%, 320) | 2 (40.0%, 696) |
| African region | 2 (10.0%, 385) | 5 (55.6%, 869) | 0 (0.0%, 0) |
| Eastern Mediterranean region | 0 (0.0%, 0) | 0 (0.0%, 0) | 0 (0.0%, 0) |
| Not reported | 0 (0.0%, 0) | 0 (0.0%, 0) | 1 (20.0%, 160) |
|
| |||
| High income | 11 (61.1%, 2135) 5 | 1 (11.1%, 1011) 6 | 0 (0.0%, 0) |
| Upper-middle income | 1 (5.6%, 380) | 3 (33.3%, 822) | 1 (20.0%, 594) 7 |
| Lower-middle income | 5 (27.8%, 1238) | 5 (55.6%, 1063) | 3 (60.0%, 774) |
| Low income | 1 (5.6%, 188) | 0 (0.0%, 0) | 0 (0.0%, 0) |
| Not reported | 0 (0.0%, 0) | 0 (0.0%, 0) | 1 (20.0%, 160) |
|
| |||
| 2012–2014 | 2 (12.5%, 783) | 0 (0.0%, 0,) | 0 (0.0%, 0) |
| 2015–2016 | 4 (25.0%, 543) | 0 (0.0%, 0) | 0 (0.0%, 0) |
| 2017–2019 | 9 (56.3%, 2514) | 4 (66.7%, 908) | 1 (33.3%, 907) |
| Not reported | 1 (6.3%, 101) | 2 (33.3%, 1562) | 2 (66.7%, 621) |
|
| |||
| HCV clinics | 9 (52.9%, 2835) 8 | 2 (28.6%, 449) | 1 (33.3%, 907) |
| Drug treatment sites | 6 (35.3%, 803) | 2 (28.6%, 696)9 | 0 (0.0%, 0) |
| Not reported | 2 (11.8%, 303) | 3 (42.9%, 1325) | 2 (66.7%, 621) |
|
| |||
| Case-control | 1 (6.3%, 101) | 3 (50.0%, 1299) | 0 (0.0%, 0) |
| Cross-sectional | 7 (43.8%, 2699) | 3 (50.0%, 2023) | 3 (100.0%, 1528) |
| Cohort study | 8 (50.0%, 1141) | 0 (0.0%, 0) | 0 (0.0%, 0) |
|
| |||
| Known HCV-positive | 6 (37.5%, 1712) | 0 (0.0%, 0) | 0 (0.0%, 0) |
| Unknown HCV status | 10 (62.5%, 2229) | 6 (100.0%, 2470) | 3 (100.0%, 1528) |
| Other high-risk | 2 (20.0%, 1156) | 1 (16.7%, 425) | 1 (25.0%, 313) 10 |
| PWID | 6 (60.0%, 803) | 0 (0.0%, 0) | 0 (0.0%, 0) |
| General population | 2 (20.0%, 270) | 5 (83.3%, 2045) | 3 (75.0%, 1215) |
|
| |||
| Fingerstick capillary whole blood 11 | 9 (47.4%, 1960) 12 | 0 (0.0%, 0) | 2 (28.6%, 1018) 13 |
| Serum or plasma | 8 (42.1%, 2088) | 6 (100.0%, 2470) | 3 (42.9%, 1412) |
| Venous whole blood | 2 (10.5%, 1098) | 0 (0.0%, 0) | 2 (28.6%, 359) |
| Frozen or fresh samples | |||
| Fresh samples only | 11 (68.8%, 2849) | 3 (42.9%, 947) 15 | 2 (50.0%, 1067) 16 |
| Frozen samples only | 3 (18.8%, 424) | 4 (57.1%, 1523) | 2 (50.0%, 461) |
| Fresh or frozen samples14 | 1 (6.3%, 614) | 0 (0.0%, 0) | 0 (0.0%, 0) |
| Not reported | 1 (6.3%, 54) | 0 (0.0%, 0) | 0 (0.0%, 0) |
|
| |||
| Yes | 6 (33.3%, 1453) 17 | N/A | N/A |
| No | 12 (66.7%, 2655) | N/A | N/A |
1 McHugh et al., 2017 [38] provide data from the European and Americas regions; FIND, 2017 [36] provides data from the European, Western Pacific Region, Americas, and African regions; 2 Lamoury et al., 2021 [39], FIND, 2018 [40], and Libre et al., 2018 [24] provide data from the European and African regions; 3 Two data sets were analyzed by Assennato et al., 2019 [18], one from the European region and the other from Blinded Panel samples; FIND, 2021 [17] provides data from the European and South-East Asian regions; 4 From the New World Bank country classifications by income level: 2021–2022 (https://blogs.worldbank.org/opendata/new-world-bank-country-classifications-income-level-2021–2022, accessed on 13 January 2022); 5 FIND, 2017 [36] provides data from high-income, upper-middle-income, and lower-middle-income countries; 6 Lamoury et al., 2021 [39], and FIND, 2018 [40] provide data from upper-middle-income and lower-middle-income countries; Libre et al., 2018 [24] provide data from high-income and upper-middle-income countries; 7 Two series of data were analyzed in Assennato et al., 2019 [18]; one was from lower-middle-income countries and another was analyzed in Blinded Panel samples; FIND, 2021 [17] provides data both from upper-middle-income countries and lower-middle-income countries; 8 Studies conducted in Georgia, Cameroon, Greece, and Malaysia by FIND, 2017 [36] that were from HCV clinics, while the study conducted in the United States by FIND, 2017 [36] did not provide any information about the study setting for recruitment; 9 Study conducted in Georgia by FIND, 2018 [40] that took place in a harm reduction site, while a study conducted in Cameroon by FIND, 2018 [40] did not provide any information about the study setting for recruitment; 10 FIND, 2021 [17] provides data both from other high-risk populations and the general population; 11 There are four studies (Grebely et al., 2017 [41], Bregenzer et al., 2019 [32], Calvaruso et al., 2019 [31], and Bielen et al., 2020 [27]) in which fingerprick samples were evaluated with the Xpert HCV Viral Load assay; 12 FIND, 2017 [36] provides data both using fingerstick capillary whole-blood and venous whole-blood specimens; Grebely et al., 2017 [41] provide data using both fingerstick capillary whole-blood and plasma specimens; Lamoury et al., 2018 [21] provide data using both fingerstick capillary whole-blood and plasma specimens; 13 FIND, 2021 [17] and Assennato et al., 2019 [18] provide data from fingerstick capillary whole-blood, serum or plasma, and venous whole blood specimens; 14 No clear documentation of whether fresh or frozen samples were used or the specific number of samples that were fresh or frozen; 15 Libre et al., 2018 [24] provide data both using fresh and frozen specimens; 16 Assennato et al., 2019 [18] provide data both using fresh and frozen specimens; 17 Bregenzer et al., 2019 [32] and Lamoury et al., 2018 [21] provide data both using the Xpert HCV VL Fingerprick assay and the Xpert HCV Viral load assay.
Diagnostic accuracy of point-of-care HCV RNA assays for diagnosing and monitoring chronic HCV infection in sub-group and meta-regression analyses.
| Xpert HCV Viral Load | Genedrive HCV ID Kit | Truenat and SAMBA | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Summary Sensitivity % (95% CI) | Summary Specificity % (95% CI) | Summary Sensitivity % (95% CI) | Summary Specificity % (95% CI) | Summary Sensitivity % (95% CI) | Summary Specificity % (95% CI) | ||||||||||
| Overall | 99 (98–99) | 99 (98–100) | 99 (98–100) | 100 (99–100) | 95 (94–97) | 99 (99–100) | |||||||||
|
| |||||||||||||||
| European region | 98 (97–99) | Ref | 99 (97–100) | Ref | Ref | 99 (97–100) | Ref | 100 (99–100) | Ref | Ref | 96 (94–98) | Ref | 99 (98–100) | Ref | Ref |
| Western Pacific region | 100 (96–100) | <0.001 *** | 98 (96–99) | 0.42 | 0.02 * | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
| Americas region | 99 (97–100) | 0.04 * | 100 (73–100) | 0.11 | 0.16 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
| South-East Asian region | 98 (97–99) | <0.001 *** | 99 (97–100) | 0.75 | 0.78 | 100 (96–100) | 0.64 | 99 (98–100) | 0.10 | 0.94 | 93 (90–96) | <0.001 *** | 99 (98–100) | <0.01 ** | 0.14 |
| African region | 100 (66–100) | 0.79 | 95 (81–99) | <0.01 ** | 0.28 | 100 (98–100) | <0.001 *** | 100 (98–100) | <0.001 *** | 0.13 | N/A | N/A | N/A | N/A | N/A |
|
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| High income | 99 (98–99) | Ref | 99 (98–100) | Ref | Ref | 99 (97–99) | Ref | 100 (99–100) | Ref | Ref | N/A | N/A | N/A | N/A | N/A |
| Upper-middle income | 96 (95–98) | 0.08 | 100 (99–100) | <0.001 *** | 0.09 | 100 (95–100) | 0.9 | 99 (98–100) | <0.001 *** | 0.07 | 96 (94–98) | Ref | 99 (99–100) | Ref | Ref |
| Lower-middle income | 99 (97–100) | 0.04 * | 97 (95–99) | 0.7 | 0.52 | 100 (96–100) | 0.46 | 100 (99–100) | <0.001 *** | 0.2 | 94 (92–95) | <0.001 *** | 99 (97–99) | 0.02 * | 0.23 |
| Low income | 99 (95–100) | 0.47 | 99 (93–100) | 0.02 * | 0.98 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
|
| |||||||||||||||
| 2012–2014 | 100 (99–100) | Ref | 92 (88–95) | Ref | Ref | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
| 2015–2016 | 98 (95–100) | <0.001 *** | 99 (95–100) | <0.001 *** | <0.01 ** | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
| 2017–2019 | 99 (98–99) | <0.01 ** | 100 (99–100) | 0.03 | 0.05 * | 100 (96–100) | N/A | 99 (99–100) | N/A | N/A | 95 (94–97) | Ref | 99 (99–100) | Ref | Ref |
|
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| HCV clinics | 99 (98–100) | Ref | 99 (97–100) | Ref | Ref | 100 (98–100) | Ref | 100 (98–100) | Ref | Ref | 95 (94–97) | Ref | 99 (99–100) | Ref | Ref |
| Drug treatment sites | 99 (97–100) | 0.08 | 99 (98–99) | 0.01 ** | 0.56 | 100 (95–100) | <0.01 ** | 99 (98–100) | <0.001 *** | 0.19 | N/A | N/A | N/A | N/A | N/A |
|
| |||||||||||||||
| Cross-sectional | 99 (98–99) | Ref | 100 (99–100) | Ref | Ref | 99 (95–100) | Ref | 99 (99–100) | Ref | Ref | 95 (94–97) | Ref | 99 (99–100) | Ref | Ref |
| Cohort study | 99 (96–99) | 0.02 * | 98 (96–99) | 0.65 | 0.05 * | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
| Casecontrol | 100 (100–100) | <0.001 *** | 100 (100–100) | <0.001 *** | 0.3 | 99 (99–99) | 0.84 | 100 (100–100) | <0.001 *** | 0.11 | N/A | N/A | N/A | N/A | N/A |
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| |||||||||||||||
| Known HCV-positive | 100 (96–100) | Ref | 94 (90–97) | Ref | Ref | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
| Unknown HCV status | 98 (97–99) | 0.95 | 99 (99–100) | <0.001 *** | 0.01 ** | 99 (98–100) | N/A | 100 (99–100) | N/A | N/A | 95 (94–97) | Ref | 99 (99–100) | Ref | Ref |
| Other high risk | 98 (97–99) | Ref | 100 (99–100) | Ref | Ref | 97 (92–100) | Ref | 100 (99–100) | Ref | Ref | 94 (91–96) | Ref | 98 (95–100) | Ref | Ref |
| PWID | 99 (97–100) | <0.001 *** | 99 (98–99) | 0.48 | 0.25 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
| General population | 100 (100–100) | <0.001 *** | 98 (89–100) | <0.001 *** | 0.03 * | 100 (98–100) | 0.18 | 100 (99–100) | 0.31 | 0.20 | 96 (94–97) | <0.001 *** | 99 (99–100) | <0.01 ** | 0.26 |
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| Fingerstick capillary whole blood | 98 (97–99) | Ref | 99 (98–100) | Ref | Ref | N/A | N/A | N/A | N/A | N/A | 92 (89–95) | Ref | 100 (98–100) | Ref | Ref |
| Serum or plasma | 100 (97–100) | 0.02 * | 96 (93–98) | 0.87 | 0.01 * | 99 (98–100) | N/A | 100 (99–100) | N/A | N/A | 100 (97–100) | <0.001 *** | 96 (93–98) | 0.55 | 0.07 |
| Venous whole blood | 98 (96–99) | <0.001 *** | 100 (98–100) | 0.78 | 0.87 | N/A | N/A | N/A | N/A | N/A | 96 (93–98) | <0.001 *** | 99 (97–100) | 0.53 | 0.34 |
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| Fresh samples only | 99 (98–99) | Ref | 99 (99–100) | Ref | Ref | 99 (95–100) | Ref | 99 (98–100) | Ref | Ref | 96 (94–97) | Ref | 99 (99–100) | Ref | Ref |
| Frozen samples only | 100 (55–100) | 0.86 | 91 (81–96) | 0.02 * | 0.04 * | 99 (98–100) | 0.48 | 100 (100–100) | <0.001 *** | 0.02 * | 93 (88–99) | 0.03 * | 99 (98–100) | 0.16 | 0.6 |
| Fresh or frozen samples | 99 (95–100) | 0.98 | 99 (93–100) | <0.01 ** | 0.17 | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
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| Yes | 98 (97–99) | Ref | 100 (99–100) | Ref | Ref | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
| No | 100 (98–100) | <0.001 *** | 97 (94–98) | 0.84 | <0.01 ** | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
* represents < 0.05; ** represents < 0.01; *** represents < 0.001.
Figure 5Hierarchical summary receiver-operator curve for the diagnostic accuracy of point-of-care HCV RNA assays used to diagnose chronic HCV infection. (Overall, with all studies combined).