| Literature DB >> 35625232 |
Serghei Pogrebnoi1,2, Oleg Radul1, Eugenia Stingaci1, Lucian Lupascu1, Vladimir Valica2, Livia Uncu2, Anastasia Smetanscaia2, Anthi Petrou3, Ana Ćirić4, Jasmina Glamočlija4, Marina Soković4, Athina Geronikaki3, Fliur Z Macaev1,2.
Abstract
The control of fungal pathogens is increasingly difficult due to the limited number of effective drugs available for antifungal therapy. In addition, both humans and fungi are eukaryotic organisms; antifungal drugs may have significant toxicity due to the inhibition of related human targets. Furthermore, another problem is increased incidents of fungal resistance to azoles, such as fluconazole, ketoconazole, voriconazole, etc. Thus, the interest in developing new azoles with an extended spectrum of activity still attracts the interest of the scientific community. Herein, we report the synthesis of a series of triazolium salts, an evaluation of their antifungal activity, and docking studies. Ketoconazole and bifonazole were used as reference drugs. All compounds showed good antifungal activity with MIC/MFC in the range of 0.0003 to 0.2/0.0006-0.4 mg/mL. Compound 19 exhibited the best activity among all tested with MIC/MFC in the range of 0.009 to 0.037 mg/mL and 0.0125-0.05 mg/mL, respectively. All compounds appeared to be more potent than both reference drugs. The docking studies are in accordance with experimental results.Entities:
Keywords: CYP51; antifungal; docking; microdilution method; triazolium salts
Year: 2022 PMID: 35625232 PMCID: PMC9137982 DOI: 10.3390/antibiotics11050588
Source DB: PubMed Journal: Antibiotics (Basel) ISSN: 2079-6382
Figure 1Structure of drugs with the azole moiety.
Scheme 1Synthesis of triazolium salts. Reagents and conditions: (a) 4-amino-4H-1,2,4-triazole, MeCN, rt, 1 h; (b) (1) HCl aq., NaNO2, 5 °C at 1 h then 3 h at rt; (2) NH4OH to pH = 8–9; (c) 1H-1,2,4-triazole, Et3N, MeCN, 7 h, rt; (d) 1-aryl-2-bromoethanones, ethyl 2-bromoacetate or iodoethane, MeCN, 7 h, reflux.
Scheme 2Synthesis of 1-Benzyl-substituted triazolium salts.Reagents and conditions: (1) benzyl chloride, K2CO3, acetone, rt, 24 h; (2) benzyl chloride, phenacyl bromide or 2,4-dichlorophenacyl bromide, acetone, reflux 8 h.
Antifungal activity of the synthesized compound (MIC and MFC are in mg/mL).
| Compounds |
|
|
|
|
|
|
|
| |
|---|---|---|---|---|---|---|---|---|---|
|
| MIC | 0.15 | 0.10 | 0.10 | 0.05 | 0.025 | 0.10 | 0.07 | 0.20 |
| MFC | 0.20 | 0.20 | 0.20 | 0.10 | 0.05 | 0.20 | 0.10 | 0.40 | |
|
| MIC | 0.025 | 0.025 | 0.0125 | 0.025 | 0.05 | 0.05 | 0.025 | 0.05 |
| MFC | 0.05 | 0.05 | 0.025 | 0.05 | 0.10 | 0.10 | 0.05 | 0.10 | |
|
| MIC | 0.025 | 0.0125 | 0.07 | 0.0 | 0.009 | 0.0125 | 0.0125 | 0.025 |
| MFC | 0.05 | 0.025 | 0.10 | 0.10 | 0.0125 | 0.025 | 0.025 | 0.05 | |
|
| MIC | 0.05 | 0.05 | 0.025 | 0.037 | 0.015 | 0.03 | 0.025 | 0.05 |
| MFC | 0.10 | 0.10 | 0.05 | 0.0 | 0.025 | 0.05 | 0.05 | 0.10 | |
|
| MIC | 0.07 | 0.006 | 0.05 | 0.025 | 0.025 | 0.05 | 0.05 | 0.10 |
| MFC | 0.10 | 0.0125 | 0.10 | 0.05 | 0.05 | 0.10 | 0.10 | 0.20 | |
|
| MIC | 0.037 | 0.015 | 0.025 | 0.05 | 0.009 | 0.037 | 0.037 | 0.037 |
| MFC | 0.05 | 0.025 | 0.05 | 0.10 | 0.0125 | 0.05 | 0.05 | 0.05 | |
|
| MIC | 0.05 | 0.03 | 0.025 | 0.05 | 0.015 | 0.05 | 0.03 | 0.07 |
| MFC | 0.10 | 0.05 | 0.05 | 0.10 | 0.025 | 0.10 | 0.05 | 0.10 | |
|
| MIC | 0.037 | 0.0125 | 0.025 | 0.037 | 0.009 | 0.02 | 0.0125 | 0.025 |
| MFC | 0.05 | 0.025 | 0.05 | 0.05 | 0.0125 | 0.025 | 0.025 | 0.05 | |
|
| MIC | 0.07 | 0.0003 | 0.05 | 0.05 | 0.006 | 0.037 | 0.025 | 0.025 |
| MFC | 0.10 | 0.0006 | 0.10 | 0.10 | 0.0125 | 0.05 | 0.05 | 0.05 | |
|
| MIC | 0.05 | 0.05 | 0.025 | 0.025 | 0.012 | 0.05 | 0.037 | 0.025 |
| MFC | 0.10 | 0.10 | 0.05 | 0.05 | 0.025 | 0.10 | 0.05 | 0.05 | |
|
| MIC | 0.05 | 0.015 | 0.037 | 0.05 | 0.009 | 0.037 | 0.025 | 0.027 |
| MFC | 0.10 | 0.025 | 0.05 | 0.10 | 0.0125 | 0.05 | 0.05 | 0.05 | |
|
| MIC | 0.10 | 0.07 | 0.05 | 0.05 | 0.037 | 0.07 | 0.05 | 0.07 |
| MFC | 0.20 | 0.10 | 0.10 | 0.10 | 0.05 | 0.10 | 0.10 | 0.10 | |
|
| MIC | 0.10 | 0.05 | 0.037 | 0.05 | 0.015 | 0.05 | 0.05 | 0.10 |
| MFC | 0.20 | 0.10 | 0.05 | 0.10 | 0.05 | 0.10 | 0.10 | 0.20 | |
|
| MIC | 0.10 | 0.07 | 0.037 | 0.05 | 0.025 | 0.20 | 0.025 | 0.20 |
| MFC | 0.20 | 0.10 | 0.05 | 0.10 | 0.05 | 0.40 | 0.05 | 0.40 | |
|
| MIC | 0.10 | 0.037 | 0.05 | 0.05 | 0.015 | 0.037 | 0.037 | 0.037 |
| MFC | 0.20 | 0.05 | 0.10 | 0.10 | 0.025 | 0.05 | 0.05 | 0.05 | |
|
| MIC | 0.38 | 0.38 | 0.28 | 0.38 | 1.88 | 0.38 | 1.88 | 0.38 |
| MFC | 0.94 | 0.94 | 0.38 | 0.94 | 2.82 | 0.94 | 2.82 | 0.57 | |
|
| MIC | 0.48 | 0.32 | 0.48 | 0.48 | 0.48 | 0.64 | 0.64 | 0.32 |
| MFC | 0.64 | 0.64 | 0.64 | 0.64 | 0.64 | 0.81 | 0.81 | 0.64 | |
A.f.—A. fumigatus, A.v.—A. versicolor, A.o.—A. ochraceus, A.n.—A. niger, T.v.—T. viride, P.f.—P. funiculosum, P.o.—P. ochrochloron, P.v.c.—P. cyclpoium var verucosum.
Molecular docking free binding energy estimates to antifungal targets.
| Est. Binding Energy (kcal/mol) | ||||||
|---|---|---|---|---|---|---|
| N/N | DNA TopoIV | CYP51 of | Residues | Halogen Interactions | Hydrophobic Interactions | Interactions with HEM601 |
|
| - | −6.60 | - | - | Phe233, Leu300, Phe380, Met508, Hem601 | Hydrophobic |
|
| −4.11 | −9.27 | Tyr132 | - | Phe233, Leu376, Phe380, Met508, Val509, Hem601 | Hydrophobic, Aromatic |
|
| −2.27 | −10.60 | - | Met508 | Phe228, Thr311, Leu376, Met508, Val509 | Negative ionizable |
|
| −3.37 | −9.10 | Tyr118 | - | Leu376, Phe380, Met508, Val509, Hem601 | Hydrophobic, Aromatic |
|
| −2.82 | −6.95 | - | - | Leu376, Met508, Hem601 | Hydrophobic |
|
| −1.86 | −8.80 | Tyr118 | - | Tyr118, Leu376, Met508, Hem601 | Hydrophobic, Aromatic |
|
| −4.16 | −8.84 | Tyr64 | - | Tyr118, Leu300, Leu376, Phe380, Met508, Hem601 | Hydrophobic, Aromatic |
|
| −3.30 | −10.83 | Tyr132 | - | Phe233, Thr311, Leu376, Phe380, Met508, Hem601 | Hydrophobic, Aromatic, Positive ionizable |
|
| - | −7.11 | - | - | Thr311, Leu376, Met508, Hem601 | Hydrophobic |
|
| - | −8.10 | - | Met508 | Thr311, Leu376, Met508, Hem601 | Hydrophobic, Aromatic |
|
| −2.52 | −9.15 | Tyr132 | - | Thr311, Leu376, Met508, Hem601 | Hydrophobic, Aromatic |
|
| −3.79 | −7.50 | Tyr118 | - | Tyr118, Leu376, Hem601 | Hydrophobic |
|
| - | −9.73 | - | Met508 | Phe233, Thr311, Leu376, Met508, Hem601 | Hydrophobic, Aromatic |
|
| - | −10.20 | Tyr132 | - | Thr311, Leu376, Phe380, Met508, Hem601 | Hydrophobic |
|
| −4.53 | −7.72 | - | - | Phe233, Leu376, Phe380, Met508, Hem601 | Hydrophobic |
|
| - | −8.23 | Tyr64 | - | Tyr118, Ile131, Tyr132, Ile304, Leu300, Leu376, Met508, Hem601 | Hydrophobic, Aromatic |
Figure 2Docking pose of the most active compound 19 (A) and 2D diagram (B) in lanosterol 14α-demethylase of C. albicans (CYP51ca). Red-dotted arrows indicate H-bond, blue arrows positive ionizable, blue spheres indicate the aromatic, and yellow spheres indicate the hydrophobic interactions.
Figure 3Docked conformation of reference drug ketoconazole in lanosterol 14α-demethylase of C. albicans (CYP51ca). Red-dotted arrows indicate H-bond, blue spheres indicate the aromatic, and yellow spheres indicate the hydrophobic interactions.
Figure 4The superposition of the most active compound 19 (magenta) and Ketoconazole (grey) in lanosterol 14α-demethylase of C. albicans (CYP51ca). The heme group is represented in purple color.
Figure 5Docking pose of the compound 8 (A) and 2D diagram (B) in lanosterol 14α-demethylase of C. albicans (CYP51ca). Pink-dotted arrows indicate halogen-bond interaction; the red arrows indicate negatively ionizable.
Molecular docking free binding energy estimates to 14-alpha demethylase (CYP51B) from the fungus Aspergillus fumigatus in complex with voriconazole.
| N/N | Est. Binding Energy(kcal/mol) | Residues | Hydrophobic Interactions | Interactions with HEM601 |
|---|---|---|---|---|
|
| −7.15 | - | Tyr122, Thr126, Val135, Ala307, Phe229, Ala303, Leu503, Hem580 | Hydrophobic |
|
| −10.30 | Hem508 | Phe130, Val135, Ala307, Ala303, Leu304 | Hydrogen bond |
|
| −11.47 | Tyr122, Hem508 | Thr126, Phe130, Val135, Ala307, Ala303, Leu503, Hem580 | Hydrophobic, hydrogen bond |
|
| −9.27 | Tyr122 | Thr126, Val135, Ala307, Ala303, Leu503, Hem580 | Hydrophobic, Aromatic |
|
| −7.91 | - | Tyr122, Thr126, Phe130, Ala307, Phe229, Ala303, Ile373, Phe504, Hem580 | Hydrophobic |
|
| −10.45 | Hem508 | Tyr122, Phe130, Val135, Ala307, Leu304 | Hydrogen bond |
|
| −8.86 | - | Phe130, Val135, Ala307, Ala303, Leu304, Hem580 | Hydrophobic, Aromatic |
|
| −10.82 | Hem508 | Tyr122, Thr126, Phe130, Val135, Ile373, Phe504, Hem580 | Hydrophobic, hydrogen bond |
|
| −8.05 | - | Tyr122, Thr126, Phe130, Ala307, Hem580 | Hydrophobic |
|
| −8.30 | - | Tyr122, Thr126, Phe130, Ala303, Phe504, Hem580 | Hydrophobic, Aromatic |
|
| −9.02 | Tyr122 | Thr126, Val135, Ala307, Leu503, Hem580 | Hydrophobic, Aromatic |
|
| −7.24 | - | Tyr122, Thr126, Ala307, Phe229, Ala303, Hem580 | Hydrophobic |
|
| −8.41 | - | Thr126, Phe130, Ala303, Phe504, Hem580 | Hydrophobic, Aromatic |
|
| −8.80 | - | Phe130, Val135, Ala307, Leu304, Hem580 | Hydrophobic, Aromatic |
|
| −7.10 | - | Tyr122, Thr126, Val135, Hem580 | Hydrophobic |
|
| −10.23 | - | Tyr122, Thr126, Phe130, Val135, Ala307, Phe229, Ala303, Ile373, Phe504, Leu503, Hem580 | Hydrophobic, Fe-binding |
Figure 6Docking pose of the compound 7 (A) and 2D diagram (B) in 14-alpha demethylase (CYP51B) from the fungus Aspergillus fumigatus. Docking pose of the compound 8 (C) and 2D diagram (D) in 14-alpha demethylase (CYP51B) from Aspergillus fumigatus. Green dotted arrows indicate hydrogen bonds, and yellow spheres indicate the hydrophobic interactions.
Figure 7(A) 2D diagram of the syncrystalized drug voriconazole in 14-alpha demethylase (CYP51B) from the fungus Aspergillus fumigatus. (B) Superposition of most active compounds 8 (magenta), 7 (orange), and voriconazole (grey) 14-alpha demethylase (CYP51B) from the fungus Aspergillus fumigatus. Green arrows indicate a hydrogen bond; yellow spheres indicate the hydrophobic interactions, and the blue line indicates Fe-binding.
Drug likeness predictions and physicochemical–pharmacokinetic/ADME properties of the tested compounds.
| No | MW | Number of HBA a | Number of HBD b | Log | Log S d | TPSA e | Lipinski, Ghose, Veber, Egan, and Muegge Violations | Bioavailability Score | Drug-Likeness Model Score |
|---|---|---|---|---|---|---|---|---|---|
|
| 285.14 | 5 | 1 | −14.56 | Soluble | 49.57 | 0 | 0.55 | −0.94 |
|
| 364.04 | 5 | 1 | −10.84 | Soluble | 49.57 | 0 | 0.55 | −0.81 |
|
| 442.93 | 5 | 1 | −9.33 | Soluble | 49.57 | 0 | 0.55 | −0.62 |
|
| 354.03 | 5 | 1 | −10.27 | Soluble | 49.57 | 0 | 0.55 | −0.45 |
|
| 418.28 | 6 | 0 | −9.26 | Soluble | 49.85 | 0 | 0.55 | −0.69 |
|
| 487.17 | 6 | 0 | −7.33 | Poorly Soluble | 49.85 | 0 | 0.55 | 0.05 |
|
| 504.16 | 6 | 1 | 0.00 | Moderately Soluble | 103.05 | 1 | 0.55 | −0.27 |
|
| 457.15 | 5 | 0 | −7.94 | Moderately Soluble | 40.62 | 0 | 0.55 | −0.01 |
|
| 526.04 | 5 | 0 | −6.96 | Poorly | 40.62 | 1 | 0.55 | −0.44 |
|
| 425.11 | 6 | 0 | −9.97 | Moderately Soluble | 49.85 | 0 | 0.55 | −0.32 |
|
| 447.14 | 5 | 0 | −7.91 | Poorly Soluble | 40.62 | 0 | 0.55 | −0.23 |
|
| 414.07 | 4 | 0 | −1.63 | Moderately Soluble | 23.55 | 0 | 0.55 | −0.19 |
|
| 287.79 | 3 | 0 | −8.77 | Moderately Soluble | 6.48 | 0 | 0.55 | −1.15 |
|
| 360.25 | 4 | 0 | −9.78 | Moderately Soluble | 23.55 | 0 | 0.55 | −0.70 |
|
| 429.14 | 4 | 0 | −8.52 | Poorly Soluble | 23.55 | 0 | 0.55 | 0.17 |
(a) Number of hydrogen bond acceptors; (b) number of hydrogen bond donors; (c) lipophilicity; (d) water solubility (SILICOS-IT [S = Soluble]); (e) topological polar surface area (Å2).
Figure 8Docking of the initial inhibitor to the 5V5Z structure.