Literature DB >> 35622875

Evaluation of renal injury and function biomarkers, including symmetric dimethylarginine (SDMA), in the rat passive Heymann nephritis (PHN) model.

Michael J Coyne1, A Eric Schultze2, Donald J McCrann1, Rachel E Murphy1, Julie Cross1, Marilyn Strong-Townsend1, Corie Drake1, Rebekah Mack1.   

Abstract

Symmetric dimethylarginine (SDMA) is a serum biomarker of excretory renal function which consistently correlates with glomerular filtration rate (GFR) across multiple species including rats, dogs, and humans. In human and veterinary clinical settings SDMA demonstrates enhanced sensitivity for detection of declining renal function as compared to other serum biomarkers, but application in preclinical study designs thus far has been limited. The purpose of this study was to determine the performance of serum SDMA in a rat passive Heyman nephritis model of glomerulopathy. In addition to SDMA other biomarkers of excretory renal function were measured including serum creatinine (sCr), blood urea nitrogen (BUN), and cystatin C along with creatinine clearance. Urinary renal biomarkers including microalbumin (μALB), clusterin (CLU), cystatin C, kidney injury marker-1 (KIM-1), neutrophil gelatinase-associated lipocalin (NGAL), and osteopontin (OPN) were also measured. PHN was induced using commercial sheep anti-Fx1A serum. Tissue, serum, and urine were collected from groups of control and anti-Fx1A-treated animals for biomarker evaluation, hematology, urinalysis, serum biochemistry, and histologic examination of kidney. Over the course of a 28-day study, concentrations of the urinary biomarkers μALB, CLU, cystatin C, NGAL, KIM-1 and the serum biomarker cystatin C increased significantly in anti-Fx1A-treated rats as compared to controls but no significant increase in serum SDMA, sCr, BUN, or creatinine clearance were noted in anti-Fx1A-treated rats. Given lack of direct GFR measurement or significant change in the renal function biomarkers sCr, BUN, and creatinine clearance, it is unclear if GFR differed significantly between control and anti-Fx1A-treated rats in this study, though urinary biomarkers and histopathologic findings supported renal injury in anti-Fx1A-treated rats over the time course investigated. This study is among the first to investigate serum SDMA in a rat model relevant to preclinical safety assessment and serves to inform future experimental designs and biomarker selection when evaluation of glomerular injury is of priority.

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Year:  2022        PMID: 35622875      PMCID: PMC9140233          DOI: 10.1371/journal.pone.0269085

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.752


Introduction

Renal biomarker discovery is an active and burgeoning area of research. Applications of a promising biomarker may be far ranging, including safety evaluation in the preclinical and clinical phases of drug development as well as clinical diagnosis and monitoring of renal disease. Suitability of a biomarker for these various assessments should be determined by studies designed to evaluate the intended use in the population or species of interest. To this end, numerous publications have evaluated emerging renal biomarkers in preclinical and clinical contexts, and in 2008, eight urinary nephrotoxicity biomarkers were the first to be qualified under the Food and Drug Administration’s (FDA) biomarker qualification process [1-4]. As the relative merits of an individual renal biomarker may vary by application, emerging biomarkers can provide complimentary information when evaluated in concert. For instance, while the urinary nephrotoxicity biomarkers KIM-1 and β2-microglobulin were both qualified by the FDA as safety biomarkers to assess renal injury in the rat, KIM-1 is a biomarker for tubular alterations and β2-microglobulin is used to detect glomerular damage or impairment of kidney tubular reabsorption [4]. Biomarkers can vary in expression level, localization within the nephron, and response time-course following renal injury; as such assessment of renal biomarkers using a panel approach can deepen understanding of pathologic processes, and when measured longitudinally, enhance evaluation for improvement or decline in renal function both in preclinical models and clinical settings [5]. Symmetric dimethylarginine (SDMA) is a biomarker of excretory renal function. A byproduct of intranuclear arginine methylation, SDMA is produced in a stable manner by all nucleated cells, released to the serum as intracellular proteins are processed, and excreted primarily (>90%) by renal clearance [6]. In people, dogs, cats, and rats, serum SDMA has been shown to correlate highly to glomerular filtration rate (GFR) as estimated by inulin clearance or other surrogate markers such as creatinine clearance [6-9]. Though still routinely employed, the traditional serum biomarkers of renal excretory function creatinine and blood urea nitrogen (BUN) have long been criticized as relatively insensitive for early detection of declining renal function. The specificity of these biomarkers for renal function can also be complicated by comorbidities including loss of muscle mass in the case of creatinine, or gastrointestinal pathology in the case of BUN. As such, much research has focused on noninvasive serum biomarkers such as SDMA and cystatin C as more sensitive alternatives to traditional serum biomarkers of excretory renal function. In the veterinary clinical setting, serum SDMA was a more sensitive biomarker than serum creatinine for declining renal function in dogs and cats with naturally occurring chronic kidney disease (CKD), increasing with as little as 25% loss of excretory function [6, 9]. In pediatric human patients, serum SDMA showed higher diagnostic efficiency than serum cystatin C for detecting CKD [10]. As SDMA has been shown to outperform other surrogate serum biomarkers of GFR across multiple species including rats and dogs, it may be a promising candidate to enhance understanding of renal excretory function in preclinical studies utilizing these species. Investigations of SDMA in the peer-reviewed literature predominately focus either on utility as a diagnostic biomarker in naturally occurring renal disease or basic science research, while evaluations of SDMA as a renal safety biomarker in relevant preclinical species and study designs are not as well represented. Recent validation of a high through put immunoassay for measurement of serum SDMA in rats, however, allows for increased opportunities to investigate SDMA as a safety biomarker in this species[11]. The purpose of this study was to evaluate the utility of serum SDMA as a biomarker of renal excretory function within a rat passive Heymann nephritis (PHN) model of glomerulopathy. Other biomarkers of renal excretory function including serum creatinine, serum cystatin C, creatinine clearance, and the urinary renal injury markers μALB, CLU, cystatin C, KIM-1, NGAL, and OPN were measured to evaluate how SDMA compliments biomarkers currently employed in preclinical toxicity study designs. Renal histopathologic examination was performed to confirm expected histologic findings of the PHN model were recapitulated in this design, and to compare biomarker data with light microscopic findings.

Materials and methods

Animals

Male Sprague Dawley CD® IGS rats (Charles River Laboratories, Raleigh, NC, USA), approximately 7–9 weeks old, weighing 150–350 g were used in the study conducted at Covance Laboratories Inc., (Greenfield, IN, USA). The animal facility where rats were group housed was limited access, with temperature and relative humidity maintained between 20 to 26°C, a relative humidity of 30 to 70%, and a 12-hour light/12-hour dark cycle. Rats were acclimatized for a minimum of 3 days prior to onset of treatment. Rats were supplied ad libitum with Greenfield city water and a certified rat diet (#2014C Envigo, RMS, Inc.) and were given various cage-enrichment devices and dietary enrichment on full feeding days.

Facilities and animal use statement

Study protocol 8363519 was reviewed and approved in February 2017 by the Institutional Animal Care and Use Committee at Covance laboratories (Greenfield, IN). The facility used in this study was approved by the Association for Assessment and Accreditation of Laboratory Animal Care International, and the care and use of animals were in accordance with the Guide for the Care and Use of Laboratory Animals.

Test material and treatment protocol

Glomerulonephritis was induced in the rat population following the PHN model using anti-Fx1A (commercial sheep anti-Rat Fx1A serum (PTX-002S), Probetex, Inc, (San Antonio, TX, USA). 0.9% sodium chloride for injection was used as vehicle control. PHN test article, dose, route of administration, and vehicle control selection were based upon previous recommendations for model development [12]. A preliminary study for determination of dose response and time course was performed to guide dose selection and verify onset of proteinuria. Study design for the preliminary dose determination phase and longitudinal phase are detailed in Table 1. Three anti-Fx1A serum doses (2.5 mL/kg, 5.0 mL/kg and 7.5 mL/kg) were evaluated in the dose determination phase in 36 rats and following selection of an optimal dose of anti-Fx1A serum (7.5 mL/kg), the study reported here-in was conducted in 96 rats. For both study phases, rats were randomly assigned to treatment group using a computerized procedure designed to achieve body weight balance with respect to group assignment. Rats were given slow bolus intravenous injection in the tail-vein, using a 25-gauge needle. The maximum volume of test article or vehicle injected was 7.5 mL/kg. Rats were dosed once.
Table 1

Study design.

Treatment GroupTest ArticleDose (mL/kg)RoutePilot Dose Determination PhaseLongitudinal Phase
Sample day after treatment (# of rats)Sample day after treatment (# of rats)
1 Vehicle0iv3 (3)9 (3)16 (3)9(12)16(12)21 (12)28 (12)
2 Anti-Fx1A2.5iv3 (3)9 (3)16 (3)------------
3 Anti-Fx1A5.0iv3 (3)9 (3)16 (3)------------
4 Anti-Fx1A7.5iv3 (3)9 (3)16 (3)9(12)16(12)21 (12)28 (12)

---Denotes field not applicable, iv = intravenous

---Denotes field not applicable, iv = intravenous

Body weight, clinical observations and mortality

Each rat was weighed at the time of allocation to treatment group and prior to necropsy. Rats were then observed twice daily to evaluate food and water intake, signs of pain or distress and for clinical signs of illness. Any change in food and water intake or clinical signs was recorded. Following injection, rats were observed for the first 4 hours for any for signs of distress or reaction to the injection. Based upon documents that described anti-Fx1A-treated rats and pre-study dose ranging investigations completed prior to this study, no study-related pain, morbidity, or mortality was anticipated. The contract research organization’s standard criteria for visible indicators of pain in rats on study included orbital tightening, nose/cheek flattening, changes in ear and whisker carriage, hunched posture, piloerection, and porphyrin staining around nose and muzzle [13, 14]. There were no specific euthanasia criteria outside of the institution’s standard criteria. The standard criteria for euthanasia of animals on study included inability of animals to eat and drink, weight loss of ≥ 20% pre-study body weight, dehydration non-responsive to supportive care, and obvious signs of pain or suffering. Medical treatment necessary to prevent unacceptable pain and suffering, including euthanasia, was the sole responsibility of the attending laboratory animal veterinarian.

Urine and blood collection

Rats were placed in individual metabolic cages and fasted the night prior to necropsy. Urine collected chilled over this 12–16 hour period was submitted to the clinical pathology laboratory for urinalysis, urine creatinine and urine biomarker measurement. On the day of necropsy, rats were anesthetized with isoflurane by inhalation and blood collected for routine clinical pathology and biomarker analysis. Blood for hematologic analysis and clinical chemistry determinations were obtained from the orbital plexus and transferred to K2EDTA and non-additive tubes, respectively. Blood for biomarker analysis was obtained from the abdominal aorta and transferred into non-additive tubes to harvest serum.

Euthanasia and necropsy

After collection of blood for routine clinical pathology and biomarker analysis as described, rats were euthanized using isoflurane anesthesia and exsanguination, and a complete necropsy was performed.

Clinical pathology and kidney biomarkers

Complete blood counts were obtained using an ADVIA 120 Hematology System with Multispecies Software (Version 3.1, Siemens Medical Solutions, Norwood, MA, USA) and Siemens reagents. Hematology parameters included: erythrocyte concentration, hematocrit (HCT), hemoglobin concentration, mean corpuscular hemoglobin (MCH), mean corpuscular hemoglobin concentration (MCHC), mean corpuscular volume (MCV), reticulocyte, total and differential leukocyte, and platelet counts. Differential leukocyte counts and blood cell morphology were reviewed manually on Wright-Giemsa stained (ADVIA S60 Auto Slide Stainer, Siemens Medical Solutions) blood smears. Clinical chemistry parameters were obtained using a Modular P Analyzer (Roche Diagnostics, Nutley, NJ) and Roche reagents. Measured serum values were obtained for the following: concentrations of creatinine, urea, sodium, chloride, potassium, inorganic phosphorous, calcium, albumin, total protein, cholesterol, triglycerides, glucose, total bilirubin, and activities of alanine aminotransferase (ALT), alkaline phosphatase (ALP), gamma-glutamyltransferase (GGT), aspartate aminotransferase (AST), and creatine kinase (CK). Calculated values were reported for globulins concentration and the albumin/globulin ratio. The same methodology and reagents described above for serum creatinine (sCr) were used for measurement of urine creatinine (uCr). Values for uCr and sCr were used to determine creatinine clearance via previously reported methodology [15]. Creatinine clearance was adjusted for body weight and reported in units of mL/min/kg. Complete urinalysis was performed using standard methods and consisted of the following parameters: urine color, clarity, volume, specific gravity, pH, protein, blood, ketones, glucose, bilirubin, urobilinogen, and sediment examination. Concentration of the urine biomarkers, μALB, CLU, cystatin C, KIM-1, NGAL, and OPN were measured and then normalized to urine creatinine concentration for reporting. The urine cystatin C, μALB and NGAL were measured using the Luminex (Fl-labeled beads) platform (MILLIPLEX Rat Kidney Toxicity Magnetic Bead Panel 2 –Toxicity Multiplex Assay RKTX2MAG-37K, EMD Millipore Corporation, Billerica, MA USA) [16]. Biovendor ELISA method was used to obtain urine CLU (RD391034200CS) and serum cystatin C (RD391009200R) (BioVendor, Brno, Czech Republic) [17]. The urine KIM-1 and urine OPN were performed using R&D Systems ELISAs (RKM100 for KIM-1 and MOST00 for OPN) (R&D Systems, Inc. Minneapolis, MN USA) [18, 19]. Serum SDMA was measured using the IDEXX SDMA® Test (IDEXX Laboratories, Inc, Westbrook, ME, USA) [11].

Anatomic pathology

Following gross examination of both kidneys, the right kidney was fixed in 10% neutral-buffered formalin for microscopic evaluation. Kidneys were embedded in paraffin, sectioned at 5 μm and stained with hematoxylin and eosin (H and E) or periodic acid-Schiff (PAS) stains. As the PHN model induces progressive glomerular injury with subsequent tubular injury, grading scheme for microscopic kidney alterations included assessment of glomerular and tubular changes on H and E- and PAS-stained sections [12]. Histopathologic evaluation was performed on the right kidney on all rats in all groups. Primary evaluation was performed by a board-certified veterinary pathologist and results were then peer-reviewed by an additional board-certified veterinary pathologist.

Laboratories

Routine clinical pathology tests including clinical chemistry, hematology, urinalysis, and urine creatinine concentration were measured following standard methods at Covance Laboratories Inc. (Greenfield, IN). Anatomic pathology (gross and microscopic) was evaluated at Covance Laboratories Inc. (Greenfield, IN). Urine biomarkers for KIM-1, NGAL, urine Cystatin C and μALB were tested at Charles River Labs (CRL) (Mattawan, MI). Urine biomarker levels for CLU and OPN were measured at Eli Lilly and Company, (Indianapolis, IN). Serum Cystatin C was measured at Covance Laboratories Inc. (Greenfield, IN). SDMA was measured at IDEXX Laboratories, Inc. (Westbrook, ME).

Statistical analysis

For all continuous variables subjected to statistical analysis Tukey’s fence method was used to screen for extreme points within each timepoint and treatment group. Any point that was more than 4 times the inter quartile range below or above the first or third quartiles respectively was excluded from the analysis. To better approximate a normal distribution within groups, results were subjected to a log transformation before analysis. 2-Sample t-tests were used to compare treatment to a control group at each timepoint. Variance was not assumed to be equal between groups. For ordinal variables, Mann-Whitney U tests were used to identify significant differences between treatment and control groups at each timepoint. Significance was determined as p ≤ 0.05 for each test without adjustment for multiple comparisons. All analyses were conducted in R version 4.0.0 [20]. For complete blood count, clinical chemistry and body weight data statistically significant differences reported in results were further defined by percent change from vehicle control at a given timepoint as follows: [(mean value control group—mean value treatment group)/ mean value control group] X 100.

Results

No mortality was observed in any of the rats during treatment. Most anti-Fx1A-treated rats had changes to the skin of the feet and ears (red discoloration) and one rat had labored breathing. All clinical signs were observed following dosing on day 1 and resolved after 1 hour of observation. All control and treatment groups demonstrated weight gain over the course of the study (S1 Table in S1 File). An 8%decrease in body weight at day 28 was noted in anti-Fx1A-treated animals as compared to vehicle controls (S1 Table in S1 File).

Kidney biomarkers

Serum and urinary kidney biomarker data from vehicle control and anti-Fx1A-treated rats are presented in Table 2 and Figs 1–3. Two measures were identified as outliers and excluded from the analysis (NGAL, 0 ng/mg, Day 28 treatment group; OPN, 134.3 ng/mg, Day 9 treatment group). SDMA concentrations were not significantly different in anti-Fx1A-treated as compared to control rats for the duration of the study while serum Cystatin C concentrations were significantly increased (P ≤ 0.05) in anti-Fx1A-treated rats at sampling days 9–21, but were not significantly different on day 28 (Fig 1, Table 2). sCr concentrations were not significantly different (P ≤ 0.05) in anti-Fx1A-treated as compared to control rats. There was no significant difference in creatinine clearance in anti-Fx1A-treated rats as compared to controls (Fig 2, Table 2).
Table 2

Serum and urine kidney biomarker data for vehicle control and anti-Fx1A-treated rats.

TreatmentVehicleAnti-Fx1A 7.5 mL/kg
Sample Day Post-treatment Day 9Day 16Day 21Day 28Day 9Day 16Day 21Day 28
Creatinine Clearance (mL/min/kg) 3.77 (±0.67)4.06 (±0.70)4.16 (±0.77)3.66 (±0.84)3.51 (±0.83)3.97 (±0.72)3.76 (±0.93)4.01 (±0.87)
Creatinine (mg/dL) serum 0.59 (±0.03)0.62 (± 0.06)0.62 (±0.06)0.62 (±0.04)0.58 (± 0.04)0.60 (±0.04)0.58 (±0.06)0.59 (±0.05)
Urea nitrogen (mg/dL) 9.1 (± 1.4)10.3 (± 2.1)11.0 (± 2.1)12.7 (± 1.7)9.6 (± 1.3)11.1 (± 1.8)8.6* (± 1.4)9.9* (± 1.8)
Cystatin C (ng/mL) serum 1773.9 (±290.8)1833.7 (±319.7)1558.1 (±309.9)1713.5 (±382.7)2274.9* (±450.3)2226.3* (±403.2)2178.3* (±363.0)1852.8 (±642.9)
SDMA (μg/dL) serum 8.7 (±1.0)9.8 (±1.2)8.3 (±1.5)7.3 (±1.5)9.2 (±1.7)10.1 (±1.0)9.4 (±1.8)8.0 (±1.9)
μAlbumin (μg/mg) urine 72.1 (±49.6)64 (±36.6)48.4 (±16.4)33.5 (±8.4)25782.8* (±13378.2)106776.5* (±70498.4)110247* (±34997.9)104792.8* (±43163.6)
Clusterin (ng/mg) urine 87.3 (±74.5)67.9 (±269.5)84 (±188.2)47.5 (±469.8)113.2 (±48.5)275.4* (±25.7)305.3* (±31.2)449.5* (±20.1)
Cystatin C (ng/mg) urine 1044.6 (±237.9)981 (±331.3)797.1 (±198.8)774.3 (±130.3)3647.6* (±3604.9)2898.3* (±1664.4)2748.3* (±879.7)2506.4* (±1068.6)
KIM-1 (pg/mg) urine 432.4 (±261.1)512.7 (±206.4)357.8 (±267.8)514.2 (±140.2)773.7 (±408.2)1112.5* (±650.5)829.0* (±336.2)1367.6 (±1206.8)
NGAL (ng/mg) urine 310.4 (±102.4)267.9 (±104.8)267.5 (±56.8)311.5 (±111.7)971.5* (±626.7)959.2* (±491.7)784.9* (±321.0)936.3* (±666.2)
Osteopontin (ng/mg) urine 15.1 (±8.5)11.6 (±5.3)10 (±3.8)15.9 (±6.5)19.6* (±36.4)4.1* (±2.7)2.9* (±1.8)3.9* (±2.4)

Data are presented as Mean (± SD)

a Values normalized to urine creatinine.

*Anti-Fx1A-treated group is significantly different (P ≤ 0.05) from vehicle control group at the same time point.

SDMA = symmetric dimethylarginine

NGAL = neutrophil gelatinase-associated lipocalin

KIM-1 = kidney injury marker-1

Fig 1

Serum excretory renal function biomarkers in control and anti-Fx1A-treated rats.

A. Creatinine (mg/dL); B. Cystatin C (ng/mL); C. SDMA (μg/dL); D. Urea nitrogen (mg/dL). Outlier boxplot: Horizontal line within the box represents the median sample value, box represents interquartile range (IQR), whiskers extend to 1.5x IQR. * Indicates treatment group is significantly different (p ≤ 0.05) from vehicle control group at the same number of doses.

Fig 3

Urine renal biomarkers in control and anti-Fx1A-treated rats.

A. Microalbumin (μg/mg); B. Clusterin (ng/mg); C. Cystatin C (ng/mg); D. KIM-1 (pg/mg); E. NGAL (ng/mg); F. Osteopontin (ng/mg). Urine biomarker values were normalized to urine creatinine concentration. Horizontal line within the box represents the median sample value, box represents interquartile range (IQR), whiskers extend to 1.5x IQR. * Indicates treatment group is significantly different (p ≤ 0.05) from vehicle control group at the same number of doses.

Fig 2

Creatinine clearance (mL/min/kg) in control and anti-Fx1A-treated rats.

Outlier boxplot: Horizontal line within the box represents the median sample value, box represents interquartile range (IQR), whiskers extend to 1.5x IQR.

Serum excretory renal function biomarkers in control and anti-Fx1A-treated rats.

A. Creatinine (mg/dL); B. Cystatin C (ng/mL); C. SDMA (μg/dL); D. Urea nitrogen (mg/dL). Outlier boxplot: Horizontal line within the box represents the median sample value, box represents interquartile range (IQR), whiskers extend to 1.5x IQR. * Indicates treatment group is significantly different (p ≤ 0.05) from vehicle control group at the same number of doses.

Creatinine clearance (mL/min/kg) in control and anti-Fx1A-treated rats.

Outlier boxplot: Horizontal line within the box represents the median sample value, box represents interquartile range (IQR), whiskers extend to 1.5x IQR.

Urine renal biomarkers in control and anti-Fx1A-treated rats.

A. Microalbumin (μg/mg); B. Clusterin (ng/mg); C. Cystatin C (ng/mg); D. KIM-1 (pg/mg); E. NGAL (ng/mg); F. Osteopontin (ng/mg). Urine biomarker values were normalized to urine creatinine concentration. Horizontal line within the box represents the median sample value, box represents interquartile range (IQR), whiskers extend to 1.5x IQR. * Indicates treatment group is significantly different (p ≤ 0.05) from vehicle control group at the same number of doses. Data are presented as Mean (± SD) a Values normalized to urine creatinine. *Anti-Fx1A-treated group is significantly different (P ≤ 0.05) from vehicle control group at the same time point. SDMA = symmetric dimethylarginine NGAL = neutrophil gelatinase-associated lipocalin KIM-1 = kidney injury marker-1 In anti-Fx1A-treated rats there were significant increases (P ≤ 0.05) with various time courses for the urine biomarkers as compared to the controls (Table 2, Fig 3). These included an increase in urine μALB, cystatin C, and NGAL concentrations on days 9, 16, 21 and 28. Increases in urine CLU and KIM-1 concentrations were also present on days 16 and 21, and CLU remained increased while KIM-1 was not significantly different between anti-Fx1A-treated rats and controls on day 28. There was a significant decrease (P ≤ 0.05) in urine OPN in anti-Fx1A-treated rats on days 9, 16, 21, and 28 as compared to vehicle controls.

Clinical pathology

On complete blood count, multiple parameters were significantly decreased in anti-Fx1A-treated rats as compared to vehicle controls at multiple time points (S2 Table in S1 File). These included a decrease in HCT on days 9, 16, and 21 (4%) and on day 28 (8%), a decrease in erythrocyte count on day 28 (7%), a decrease in hemoglobin concentration on day 28 (8%), a decrease in MCH on day 21 (2.7%), and a decrease in MCV on day 21 (2.7%). Other parameters were significantly increased in anti-Fx1A-treated rats as compared to vehicle controls at multiple time points (S2 Table in S1 File). These included an increase in MCHC on day 9 (1.9%), an increase in reticulocyte count on day 9 (26%) and day 28 (30%), an increase in absolute neutrophil counts on day 16 (40%) and day 28 (36%), and an increase in platelet count on day 9 (35%), day 16 (34%), day 21 (29%), and day 28 (28%). On clinical chemistry evaluation, multiple analytes were significantly decreased in anti-Fx1A-treated rats as compared to vehicle controls at multiple time points (S3 Table in S1 File). These included a decrease in albumin concentration on day 9 (12%), and son day 16 (21%), day 21 (22%) and day 28 (24%); a decreased A:G ratio on day 9 (14%), and on day 21 (38%), day 21 (41%), and day 28 (40%); a decrease in total protein concentration on day 9 (5%), day 21 (3%), and day 28 (6%); a decrease in ALP activity on day 21 (14%), and day 28 (19%); a decrease in AST activity on day 21 (17%), and day 28 (19%); a decrease in total calcium concentration on day 9 (2%), and day 28 (2%); a decrease in BUN concentration on day 21 (22%), and day 28 (22%), and a decrease on glucose concentration on day 28 (11%). Other parameters were significantly increased in anti-Fx1A-treated rats as compared to vehicle controls at multiple time points (S3 Table in S1 File). These included an increase in cholesterol concentration on day 9 (19%), and on day 16 (146%), day 21 (193%), and day 28 (158%); an increase in triglyceride concentration on day 9 (50%) and on day 16 (192%), day 21 (153%), and day 28 (188%); an increase in globulin concentration on day 16 (26%), day 21 (37%), and day 28 (29%), and an increase in potassium concentration on day 16 (11%) and day 21 (12%). On urinalysis only urine protein was significantly increased in magnitude and frequency at all time points in anti-Fx1A-treated rats (P < 0.001) (S4 Table in S1 File). The changes in microscopic appearance of the kidney in anti-Fx1A-treaded rats are listed in Table 3. Microscopic changes in the kidney were time-dependent. In anti-Fx1A-treated rats, increased mesangial matrix and basophilic tubules, interpreted as regeneration, were present on days 9, 16, 21, and 28. Dilation, degeneration and necrosis of renal tubules, proteinaceous casts, and infiltration of mixed population of inflammatory cells (mononuclear and neutrophils) were observed in rats on days 16, 21, and 28. Glomeruli contained expanded PAS-negative mesangial matrix and glomerular capillaries were compressed. Basophilic tubules were observed near degenerated tubules. Degeneration and necrosis were identified by one or more of the following features: hypereosinophilia, vacuolation, fragmentation of cytoplasm, pyknotic nuclei, and/or sloughed epithelial cells within tubular lumens. Tubular epithelium degeneration and necrosis were observed in the proximal and distal tubules, as well as collecting ducts, concentrated primarily in the cortex, and extended into the medulla and papilla. Dilated tubules were lined by flattened epithelial cells and contained degenerated cell debris or PAS-positive hyaline proteinaceous material. Hyaline droplets occurred in degenerated epithelial cells in anti-Fx1A-treated rats at day 16. Minimal infiltration of mononuclear cells was noted anti-Fx1A-treated rats on day 9 (Table 3).
Table 3

Kidney microscopic alterations in anti-Fx1A-treated rats.

DoseAnti-Fx1A 7.5 mL/kg
Time Day 9Day 16Day 21Day 28
Number of male rats 12121212
Microscopic alteration Number of rats affected, severity score
    Mesangial matrix3 SL5 MI1 MI2 MI
5 SL11 SL8 SL
    Degeneration/necrosis, tubules--5 MI2 MI4 MI
4 MI6 SL4 SL
3 MO3 MO3 MO
1 MA
    Proteinaceous casts--2 MI2 MI4 MI
5 SL8 SL6 SL
2 MO1 MO1 MO
    Dilated tubules--2 MI2 MI3 MI
4 SL8 SL4 SL
3 MO1 MO3 MO
1 MA
    Basophilic tubules4 MI5 MI3 MI4 MI
1 SL5 SL8 SL4 SL
1 MO1 MO4 MO
    Infiltrate, mixed cells--8 MI8 MI7 MI
4 SL4 SL5 SL
    Infiltrate, mononuclear cells10 MI----
    Hyaline droplet, tubule cell--1 MI----
4 SL

Severity grading scale: — = Equivocal change or finding not observed; MI = Minimal; SL = Slight; MO = Moderate; MA = Marked

Severity grading scale: — = Equivocal change or finding not observed; MI = Minimal; SL = Slight; MO = Moderate; MA = Marked

Discussion

In preclinical studies immune-mediated glomerular damage represents the most commonly encountered form of drug or chemical-related glomerular injury [21]. In rats, PHN is a well-established model of membranous nephropathy, a leading cause of nephrotic syndrome in humans, and has been shown to recapitulate certain features of the human condition including hypoalbuminemia, hypercholesterolemia, and hypertriglyceridemia, as noted in anti-Fx1A-treated rats in this study [12, 22]. Clinical pathology, histopathologic assessment, as well as onset and degree of proteinuria in anti-Fx1A-treated rats were consistent with previous cases of immune-mediated glomerulopathy [12, 23, 24]. By light microscopy glomerular changes were minimal in anti-Fx1A-treated rats over the time course investigated, consisting of slight to mild proliferation of mesangial matrix. Results were not unexpected given that podocyte injury with marked proteinuria can exist without appreciable histologic abnormalities, and others have documented minimal glomerular changes on light microscopy within 4 weeks post-treatment in the rat PHN model [24, 25]. Histopathologic evidence of tubular injury has been previously described within PHN and can result from deposition of anti-Fx1A antibodies on the brush border of proximal tubular cells which is enriched in the target antigens megalin and RAP [12, 23, 26]. Proteinuria may have been another inciting factor, as injury was not confined to the proximal renal tubules in this study. Proteinuria has been linked to increased intrarenal complement activation and tubular cell apoptosis, among other mechanisms which may drive tubular injury in glomerulopathies [27, 28]. Presence of mild mixed inflammatory cells in the kidney of anti-Fx1A-treated animals in this study coincided with observance of tubular degeneration and necrosis and may have been secondary to the observed tissue damage. In one study renal interstitial inflammation was abrogated in PHN rats treated with an ACE inhibitor, indicating proteinuria may also be a driver of inflammation in this model [29]. For anti-Fx1A-treated animals in this study, proteinuria as evidenced by urinalysis and increased μALB concentration was noted at initial assessment on day 9, persisted through day 28. Detection of proteinuria by soluble biomarkers preceded light microscopic findings of proteinaceous tubular casts observed in anti-Fx1A-treated animals beginning on day 16. These results support the conclusion of others that urinary biomarkers of proteinuria, such as urinary protein or albumin concentration, are among the most useful analytes for detection of glomerulonephritis [21, 30]. The urinary biomarkers measured in this study have been previously qualified by the FDA for assessment of renal toxicity in rats and information on the function, localization, and relative performance of these biomarkers have been reviewed in a recent publication [4, 30]. In addition to μALB concentration, concentrations of the urinary biomarkers cystatin C and NGAL were increased, beginning on day 9 and persisting through day 28. As cystatin C and NGAL are both reabsorbed from the glomerular filtrate by the proximal tubules, these changes could reflect tubular dysfunction secondary to urinary protein overload; alternatively, as reabsorption of both cystatin C and NGAL appears megalin-dependent, binding of Fx1A antibodies to megalin within the proximal tubular brush border may have contributed [31, 32]. Increased urinary NGAL concentration in anti-Fx1A-treated rats may also reflect tubular injury, as NGAL expression and secretion by renal tubular epithelial cells has been shown to increase with stimuli including inflammation or ischemic injury [33, 34]. KIM-1, a type 1 cell membrane glycoprotein found within proximal renal tubular epithelium, is upregulated and shed into the urine with proximal tubular injury in rats, likely accounting for the increase in urinary KIM-1 seen on day 16 and 21 in anti-Fx1A-treated rats [35, 36]. CLU, a secreted protein which originates from multiple segments of the renal tubule as well as mesangial cells, increased in urine on days 16, 21, and 28 in anti-Fx1A-treated animals, consistent with previous rat models of glomerulopathy [30, 37]. Significantly lower urine OPN in anti-Fx1A-treated rats beginning day 9 and persisting through day 28 was a somewhat unexpected finding. OPN is a secreted glycoprotein normally found in the loop of Henle and distal nephron and can be expressed by all tubule segments and the glomerulus following renal injury. Renal OPN expression was increased in renal tubular cells in PHN rats as well as in humans with naturally occurring glomerulopathies [27, 38]. In multiple animal models and human studies of glomerular disease, urinary OPN is unchanged or increased in xenobiotic- treated animals or affected individuals as compared to controls. In patients with IgA nephritis, however, urinary OPN was significantly decreased as compared with normal controls, despite upregulation of OPN expression within renal epithelium [30, 39]. Subsequent immunoblot analysis identified a 34kD fragment of OPN in the urine of patients with IgA nephritis and in some patients with other glomerulopathies, and that this fragment could be induced in urine from normal controls on treatment with thrombin. These data suggest that decreased urinary OPN could reflect altered secretion or processing of OPN in glomerulopathy [39]. It is possible a similar mechanism may explain decreased urinary OPN in anti-Fx1A-treated rats in this study, though renal OPN expression and immunoblot analysis were not undertaken to further investigate this finding. A primary goal of this study was to evaluate utility of serum SDMA measurement within a preclinical glomerular toxicity model. While urine biomarkers can identify and in certain instances localize renal injury, markers of excretory function are best suited to inform potential impact on GFR and global renal excretory function. Performance of SDMA was compared to other renal excretory function biomarkers creatinine clearance, sCr, BUN, and serum cystatin C. Serum SDMA, sCr, BUN, and creatinine clearance did not indicate a decline in excretory renal function and were not significantly increased in anti-Fx1A-treated rats as compared to controls. Results for creatinine clearance were consistent with previous findings that decline in this biomarker did not develop until >150 days on study and an investigation in which renal blood flow and creatinine clearance were found to be significantly different between anti-Fx1A-treated rats and controls in chronic (18 months) but not subacute (2 months) PHN [23, 40]. In contrast serum cystatin C was significantly increased in anti-Fx1A-treated rats on days 9, 16, and 21 but not day 28. Cystatin C, a protease inhibitor, shares certain physiologic similarities with SDMA including synthesis by all nucleated cells, renal excretion, and correlation with GFR [9, 41]. Serum cystatin C has been proposed as a more sensitive and specific biomarker for renal function than sCr, and in some studies has been shown to outperform sCr or creatinine clearance in estimation of GFR[42-44]. Independent of GFR, however, certain extra-renal factors in people have also been described to increase serum cystatin C, including hyperthyroidism and glucocorticoid administration [41, 45, 46]. Dexamethasone administration in rats has also been shown to increase plasma cystatin C levels without change in GFR, as measured by inulin clearance [47]. Therefore, it remains unclear in the current study if increased serum cystatin C in anti-Fx1A-treated rats reflects enhanced sensitivity for detection of decreased GFR as compared to SDMA, sCr, and creatinine clearance, or if other causes, such as extrarenal factors in anti-Fx1A-treated rats, may have contributed. Direct measure of GFR, such as by inulin clearance, may have helped to elucidate the most likely cause for increased serum cystatin C and lack of direct GFR measurement is considered a limitation of this study. In conclusion, this study characterized the performance of various urinary and serum renal biomarkers within the PHN rat model. With the exception of OPN, urinary biomarkers performed as expected based upon results in other renal toxicity models, and clinical and anatomic pathology findings aligned with the previously well-described pathophysiology of PHN. Relative performance of SDMA as compared to other excretory renal function biomarkers was not able to be fully assessed in this model, as it remains unclear if GFR differed significantly between control and treated rats over the time course investigated. (DOCX) Click here for additional data file. (XLSX) Click here for additional data file. 28 Mar 2022
PONE-D-22-03958
Evaluation of renal injury and function biomarkers, including symmetric dimethylarginine (SDMA), in the rat passive Heymann nephritis (PHN) model
PLOS ONE Dear Dr. Michael J Coyne, Thank you for submitting your manuscript to PLOS ONE. After careful consideration, we feel that it has merit but does not fully meet PLOS ONE’s publication criteria as it currently stands. Therefore, we invite you to submit a revised version of the manuscript that addresses the points raised during the review process. ============================== Reviewer #1: The investigations of SDMA in the peer-reviewed literature predominantly focus on its use as a diagnostic biomarker rather than on its evaluation as a renal safety marker which is relevant for preclinical/toxicologic studies. However there are some major limitations to this study. Major comments: The main aim of this study was to assess the utility of SDMA within a preclinical glomerular toxicity model (Lines 91-93 and Line 424). To do so, the authors should have included direct GFR measurement. Indeed, sCr, BUN and creatinine clearance are very insensitive markers of excretory renal function and therefore negative results were to be anticipated. The authors can not conclude if there was any difference in GFR between control and anti-Fx1A-treated rats which implies no thorough conclusions can be drawn regarding the utility of SDMA (and of Cys C) in this experimental context. The manuscript contains expectable findings (and already published) for the urinary biomarkers. These biomarkers have already long been qualified by the FDA to evaluate renal toxicity and function. The newer investigation is the SDMA measurement in this context. Therefore it was important to include direct GFR measurements to provide the possibility for a thorough interpretation of SDMA and of Cys C findings (including relative performance to other biomarkers). Other comments: Lines 21-23. The authors state that SDMA correlates highly with GFR across multiple species including rats, dogs and humans. Line 69-71 this is repeated including cats. Based on current literature, this statement should be nuanced. Indeed, in dogs, Pelander et al. (2019) showed that overall diagnostic performance of SDMA as a marker of impaired GFR was the same as that of creatinine (both R2 = 0.62, P < .001) and this result was in line with McKenna et al. (2019) who concluded serum creatinine and SDMA were both only moderately correlated with the renal clearance (R2 = 0.52 and 0.27 respectively, p < .001). In cats, Brans et al. (2020) showed that the correlation between SDMA and GFR (τ B = −0.57; P < .001) was moderate and the correlation between sCr and GFR was of the same magnitude (τ B = −0.56; P < .001). Braff et al. (2014) equally observed that the relationship between SDMA and GFR (R2 = 0.82, P < .001) was very similar to the relationship between serum creatinine and GFR (R2 = 0.81, P <.001). Also in humans, a large meta-analysis of Kielstein et al. (2006) could not demonstrate outstanding correlation of 1/SDMA with GFR (r = 0.77 - 0.85, P < .001). Lines 139-150. Did the laboratory animal veterinarian use a scoring system for assessment of pain and well-being of the rats ? If yes, please state so. Lines 193-197. Please provide for all assays used: either appropriate references that include validation data or include validation data. Lines 200-208. Especially if animals are sacrificed, the maximum information should be gathered from the samples/study. It is not unexpected that glomerular changes on light microscopy were minimal in the antiFx1A treated rats. It is unclear why ME or IF techniques were not used. This would have allowed to bring the interpretation of the renal lesions to another level. In the results section, the authors make too much subjective interpretation of their data (the terms minimal, slightly … are used numerous numerous times). I don’t see a good argument why statistics were not performed for proteinuria ? Discussion: the first paragraph is too long (Lines 348-390). Line 438-440: please provide references for this statement on cystatin C. ============================== Please submit your revised manuscript by May 12 2022 11:59PM. If you will need more time than this to complete your revisions, please reply to this message or contact the journal office at plosone@plos.org. When you're ready to submit your revision, log on to https://www.editorialmanager.com/pone/ and select the 'Submissions Needing Revision' folder to locate your manuscript file. Please include the following items when submitting your revised manuscript:
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Any typographical or grammatical errors should be corrected at revision, so please note any specific errors here. Reviewer #1: Yes ********** 5. Review Comments to the Author Please use the space provided to explain your answers to the questions above. You may also include additional comments for the author, including concerns about dual publication, research ethics, or publication ethics. (Please upload your review as an attachment if it exceeds 20,000 characters) Reviewer #1: The investigations of SDMA in the peer-reviewed literature predominantly focus on its use as a diagnostic biomarker rather than on its evaluation as a renal safety marker which is relevant for preclinical/toxicologic studies. However there are some major limitations to this study. Major comments: The main aim of this study was to assess the utility of SDMA within a preclinical glomerular toxicity model (Lines 91-93 and Line 424). To do so, the authors should have included direct GFR measurement. Indeed, sCr, BUN and creatinine clearance are very insensitive markers of excretory renal function and therefore negative results were to be anticipated. The authors can not conclude if there was any difference in GFR between control and anti-Fx1A-treated rats which implies no thorough conclusions can be drawn regarding the utility of SDMA (and of Cys C) in this experimental context. The manuscript contains expectable findings (and already published) for the urinary biomarkers. These biomarkers have already long been qualified by the FDA to evaluate renal toxicity and function. The newer investigation is the SDMA measurement in this context. Therefore it was important to include direct GFR measurements to provide the possibility for a thorough interpretation of SDMA and of Cys C findings (including relative performance to other biomarkers). Other comments: Lines 21-23. The authors state that SDMA correlates highly with GFR across multiple species including rats, dogs and humans. Line 69-71 this is repeated including cats. Based on current literature, this statement should be nuanced. Indeed, in dogs, Pelander et al. (2019) showed that overall diagnostic performance of SDMA as a marker of impaired GFR was the same as that of creatinine (both R2 = 0.62, P < .001) and this result was in line with McKenna et al. (2019) who concluded serum creatinine and SDMA were both only moderately correlated with the renal clearance (R2 = 0.52 and 0.27 respectively, p < .001). In cats, Brans et al. (2020) showed that the correlation between SDMA and GFR (τ B = −0.57; P < .001) was moderate and the correlation between sCr and GFR was of the same magnitude (τ B = −0.56; P < .001). Braff et al. (2014) equally observed that the relationship between SDMA and GFR (R2 = 0.82, P < .001) was very similar to the relationship between serum creatinine and GFR (R2 = 0.81, P <.001). Also in humans, a large meta-analysis of Kielstein et al. (2006) could not demonstrate outstanding correlation of 1/SDMA with GFR (r = 0.77 - 0.85, P < .001). Lines 139-150. Did the laboratory animal veterinarian use a scoring system for assessment of pain and well-being of the rats ? If yes, please state so. Lines 193-197. Please provide for all assays used: either appropriate references that include validation data or include validation data. Lines 200-208. Especially if animals are sacrificed, the maximum information should be gathered from the samples/study. It is not unexpected that glomerular changes on light microscopy were minimal in the antiFx1A treated rats. It is unclear why ME or IF techniques were not used. This would have allowed to bring the interpretation of the renal lesions to another level. In the results section, the authors make too much subjective interpretation of their data (the terms minimal, slightly … are used numerous numerous times). I don’t see a good argument why statistics were not performed for proteinuria ? Discussion: the first paragraph is too long (Lines 348-390). Line 438-440: please provide references for this statement on cystatin C. ********** 6. PLOS authors have the option to publish the peer review history of their article (what does this mean?). If published, this will include your full peer review and any attached files. If you choose “no”, your identity will remain anonymous but your review may still be made public. Do you want your identity to be public for this peer review? For information about this choice, including consent withdrawal, please see our Privacy Policy. Reviewer #1: No [NOTE: If reviewer comments were submitted as an attachment file, they will be attached to this email and accessible via the submission site. Please log into your account, locate the manuscript record, and check for the action link "View Attachments". If this link does not appear, there are no attachment files.] While revising your submission, please upload your figure files to the Preflight Analysis and Conversion Engine (PACE) digital diagnostic tool, https://pacev2.apexcovantage.com/. PACE helps ensure that figures meet PLOS requirements. To use PACE, you must first register as a user. Registration is free. Then, login and navigate to the UPLOAD tab, where you will find detailed instructions on how to use the tool. If you encounter any issues or have any questions when using PACE, please email PLOS at figures@plos.org. Please note that Supporting Information files do not need this step. 6 May 2022 The authors would like to thank the reviewer for their comments. We appreciate the time and effort in reviewing our manuscript. Our responses are below. Reviewer #1: Major comments: The main aim of this study was to assess the utility of SDMA within a preclinical glomerular toxicity model (Lines 91-93 and Line 424). To do so, the authors should have included direct GFR measurement. Indeed, sCr, BUN and creatinine clearance are very insensitive markers of excretory renal function and therefore negative results were to be anticipated. The authors can not conclude if there was any difference in GFR between control and anti-Fx1A-treated rats which implies no thorough conclusions can be drawn regarding the utility of SDMA (and of Cys C) in this experimental context. The manuscript contains expectable findings (and already published) for the urinary biomarkers. These biomarkers have already long been qualified by the FDA to evaluate renal toxicity and function. The newer investigation is the SDMA measurement in this context. Therefore it was important to include direct GFR measurements to provide the possibility for a thorough interpretation of SDMA and of Cys C findings (including relative performance to other biomarkers). The authors agree that direct measurement of GFR would have been optimal in this study, but the primary goal of this study was to evaluate utility of serum SDMA measurement within a well-defined preclinical glomerular toxicity model that uses creatinine clearance as a measure of renal function. Serum SDMA, sCr, BUN, and creatinine clearance did not indicate a decline in excretory renal function and were not significantly increased in anti-Fx1A-treated rats as compared to controls. The authors wished to provide information on SDMA in a glomerular toxicity model that complements work we have done examining the same marker in a renal tubular toxicity model (Evaluation of Renal Biomarkers, Including Symmetric Dimethylarginine, following Gentamicin-Induced Proximal Tubular Injury in the Rat. https://doi.org/10.34067/KID.0006542020). Our goal was to add to the body of literature to encourage investigators to consider alternative biomarkers to evaluate kidney function and injury. Other comments: Lines 21-23. The authors state that SDMA correlates highly with GFR across multiple species including rats, dogs and humans. Line 69-71 this is repeated including cats. Based on current literature, this statement should be nuanced. Indeed, in dogs, Pelander et al. (2019) showed that overall diagnostic performance of SDMA as a marker of impaired GFR was the same as that of creatinine (both R2 = 0.62, P < .001) and this result was in line with McKenna et al. (2019) who concluded serum creatinine and SDMA were both only moderately correlated with the renal clearance (R2 = 0.52 and 0.27 respectively, p < .001). In cats, Brans et al. (2020) showed that the correlation between SDMA and GFR (τ B = −0.57; P < .001) was moderate and the correlation between sCr and GFR was of the same magnitude (τ B = −0.56; P < .001). Braff et al. (2014) equally observed that the relationship between SDMA and GFR (R2 = 0.82, P < .001) was very similar to the relationship between serum creatinine and GFR (R2 = 0.81, P <.001). Also in humans, a large meta-analysis of Kielstein et al. (2006) could not demonstrate outstanding correlation of 1/SDMA with GFR (r = 0.77 - 0.85, P < .001). We thank the reviewer for this comment and wish to address these studies. While all three studies do address GFR and correlation to SDMA there are specific nuances to the populations used which weaken the context for the relationship between GFR measured and SDMA values ascertained and therefore should be regarded with some critical interpretation and not as complete proof of the inequity of SDMA to measure indirect GFR accurately. In Mckenna et al. 2019, samples used for GFR measurement were convenience samples sent to a reference laboratory for iohexol clearance. Inherently samples being sent for iohexol clearance testing usually infers concern for concentrating ability or kidney dysfunction. Non-CKD status would be difficult to discern in the population used as “healthy”. No independent assessment was used to confirm non-CKD or CKD status. The method for comparing disease state (GFR % decrease to mean GFR) is faulted due to the inability to confirm the “healthy population” is truly non-CKD in nature. A single time point is used for comparison of % GFR decrease to SDMA and creatinine, both in a disease state and “without disease.” GFR is highly variable even in healthy animals and multiple times points would be needed to accurately determine % loss in healthy or diseased dogs. Additionally, this study examined a disease state that requires multiple time points with persistent findings for appropriate diagnosis. In Pelander et al. 2019, there was significant overlap between healthy, inconclusive, and CKD Stage I dogs. Classification into one of these three groups appears slightly arbitrary and may introduce bias. CKD Stage I makes up ~50% of population used for analysis (N=26) vs CKD II (N=12), III (N=12), and IV (N=3). If subjective criteria for classification of Normal v CKD I dogs is used, this may introduce bias from the investigator. For the dogs reported as False Positives, there are no GFRs reported for interpretation. All of these dogs were classified as CKD I vs CKD II. As these categories appear slightly arbitrary this may bias the SDMA results and its ability to interpret disease. Given the false positives occurred with both creatinine and SDMA it is clear that animals with early changes to GFR should be assessed with multiple parameters which is already part of IDEXX Laboratories’ diagnostics suggestion. The sensitivity and specificity calculation for creatinine are concerning. The reported sensitivity of 90% is well above that which is generally accepted for creatinine in the diagnosis of early renal disease. This is likely due to calculating creatinine on the entire CKD population as an identifier of disease instead of an early indicator of disease in Stage 1 or suspected patients. With this same calculation applied to SDMA, the same concerns arise. In Brans et al. 2020, a very small sample size was used: cats with CKD (N=17), control cats (N=17), including a very limited borderline CKD population (N=5). The diabetic population included has no specific value to the evaluation of the CKD population. The clinical suggestion that a more sensitive and specific cutoff for SDMA might be 18 µg/dL is made on the limited sample above, and on “false positives” which did not have follow up to confirm SDMA levels did or did not remain persistent (i.e., SDMA was an earlier indicator). GFR methodology used is one published by the author, with limited evaluation and evidence in previous publications. A variance rate of 20-30%, and single sample time point testing was used for all the statistical comparisons in a CKD and control population. SDMA performs consistently, and in a similar fashion to sCr, supporting a good correlation to GFR in most cases and in combination with other kidney biomarkers (not a clinical vacuum) can provide valuable information on decline of kidney function in dogs and cats. This same philosophy can be applied to preclinical work – SDMA can provide additional information regarding GFR, specifically in populations where Cr is less than ideal due to muscle mass effect. The authors agree that “excellent” might suggest SDMA GFR correlation always exceeds creatinine’s correlation therefore it is reasonable to modify this to consistently correlates with GFR. We have made the change to line 22 in the manuscript. Lines 139-150. Did the laboratory animal veterinarian use a scoring system for assessment of pain and well-being of the rats? If yes, please state so. Based upon documents that described anti-Fx1A-treated rats and pre-study dose ranging investigations, no study-related pain, morbidity, or mortality was anticipated for rats in this study. Therefore, there were no study- specific pain criteria outside of the institution’s standard criteria. The contract research organization’s standard criteria for visible indicators of pain in rats on study included orbital tightening, nose/cheek flattening, changes in ear and whisker carriage, hunched posture, piloerection, and porphyrin staining around nose and muzzle. We have made changes to the text and have included the following references: Sotocina SG, Sorge RE, Zaloum A, Tuttle AH, Martin LJ, Wieskopf JS, Mapplebeck JCS, Wei P, Zhan S, Zhang S, McDougall JJ, King OD, Mogil JS. The rat grimace scale: A partially automated method for quantifying pain in the laboratory rat via facial expressions Mol Pain 7: 55, 2011. Akintola T, Raver C, Studlack P, Uddin O, Masri R, Keller A. The grimace scale reliably assesses chronic pain in a rodent model of trigeminal neuropathic pain. Neurobiology of Pain Vol 2, August 2017, Pages 13-17. Lines 193-197. Please provide for all assays used: either appropriate references that include validation data or include validation data. All assays used in this study were commercially available, validated assays. Urine cystatin C, µALB and NGAL levels were determined using the MILLIPLEX Rat Kidney Toxicity Magnetic Bead Panel 2 (RKTX2MAG-37K) EMD Millipore Corporation, Billerica, MA USA. Validation data can be found at the website: https://www.emdmillipore.com/US/en/product/MILLIPLEX-MAP-Rat-Kidney-Toxicity-Magnetic-Bead-Panel-2-Toxicity-Multiplex-Assay,MM_NF-RKTX2MAG-37K Urine clusterin and serum cystatin C levels were determined using Biovendor CLU (RD391034200CS) and Biovendor cystatin C (RD391009200R), BioVendor, Brno, Czech Republic. Biovendor CLU (RD391034200CS) is no longer on market, manufacturer has sent Analytical Performance pdf . Validation data for serum cystatin C can be found at the website: https://www.biovendor.com/cystatin-c-rat-elisa?d=114#technical-data Urine KIM-1 and urine OPN were performed using R&D Systems ELISAs (RKM100 for KIM-1 and MOST00 for OPN) (R&D Systems, Inc. Minneapolis, MN USA). Validation data for OPN can be found at the website: https://www.rndsystems.com/products/mouse-rat-osteopontin-opn-quantikine-elisa-kit_most00 Validation data for KIM-1 can be found at the website: https://www.rndsystems.com/products/rat-tim-1-kim-1-havcr-quantikine-elisa-kit_rkm100#product-details Serum SDMA was measured using the IDEXX SDMA® Test (IDEXX Laboratories, Inc, Westbrook, ME, USA). Validation data for KIM-1 can be found in the publication: Evaluation of Renal Biomarkers, Including Symmetric Dimethylarginine, following Gentamicin-Induced Proximal Tubular Injury in the Rat. https://doi.org/10.34067/KID.0006542020 We have referenced the tests except for urine clusterin since the information is no longer available on the web and were uncertain how it should be referenced. Lines 200-208. Especially if animals are sacrificed, the maximum information should be gathered from the samples/study. It is not unexpected that glomerular changes on light microscopy were minimal in the antiFx1A treated rats. It is unclear why ME or IF techniques were not used. This would have allowed to bring the interpretation of the renal lesions to another level. The microscopic alterations in kidneys of rat models of human membranous nephritis have been reported in detail numerous times (Baker et al., 1989; Barabas et al., 2004 ab; Jefferson et al., 2010; Natori et al., 1987; Spicer et al., 2007). These reports documented the light microscopic changes, electron microscopic features, and unique alterations detectable by immunohistochemistry and Immunofluorescence. The focus of our investigation was to document and monitor changes in renal injury and function biomarkers, including SMDA, longitudinally in a rat passive Heymann nephritis model. We followed anti-Rat Fx1A serum dose and administration protocols for rats similar to those of several articles published in peer-reviewed journals (Natori et al., 1987; Jefferson et al., 2010). We included histologic examination of rat kidney at four times including conclusion of the study to document lesion development over time and consistency of lesions with previous studies. The study was conducted at a well-respected contract research organization and the gross necropsy and microscopic examination (primary and peer review) were conducted by board-certified veterinary pathologists. Our results are consistent with previous studies of experimentally induced Heymann nephritis in rats but were never intended to be the primary focus of the manuscript. Additional studies using electron microscopy or immunofluorescence were not aligned with our primary focus for this biomarker investigation. References: • Baker PJ, et al. Depletion of C6 prevents development of proteinuria in experimental membranous nephropathy in rats. Am J Pathol 135(1): 185-194, 1989. • Barabas AZ, et al. Presence of immunoglobulin M antibodies around the glomerular capillaries and in the mesangium of normal and passive Heymann nephritis rats. Int J Exp Path 85: 201-212, 2004a. • Barabas AZ, et al., Production of Heymann nephritis by a chemically modified renal antigen. Int J Exp Path 85: 277-285, 2004b. • Jefferson JA, et al. Experimental models of membranous nephropathy. Drug Discov Today Dis Model 7(1-2): 27-33, 2010. • Natori Y, et al. Heymann nephritis in rats induced by human renal tubular antigens: characterization of antigen and antibody specificities. Clin Exp Immunol 69; 33-40, 1987. • Spicer TS, et al. Induction of passive Heymann nephritis in complement component 6-deficient PVG rats. J Immunol 179(1): 172-178, 2007. In the results section, the authors make too much subjective interpretation of their data (the terms minimal, slightly … are used numerous numerous times). Changes have been made as requested. I don’t see a good argument why statistics were not performed for proteinuria? We thank the reviewer for the comment. We have conducted an analysis of the urine analytes measured by dip stick – protein, glucose, ketones, bilirubin, and blood. Only urinary protein was significantly increased in magnitude and frequency at all time points in anti-Fx1A-treated rats (P < 0.001). We have added this information to the manuscript. Analyte Day p Value Protein Day 9 <0.001 Protein Day 16 <0.001 Protein Day 21 <0.001 Protein Day 28 <0.001 Glucose Day 9 0.359 Glucose Day 16 NA† Glucose Day 21 NA† Glucose Day 28 NA† Ketones Day 9 1.000 Ketones Day 16 0.713 Ketones Day 21 0.135 Ketones Day 28 0.013 Bilirubin Day 9 0.304 Bilirubin Day 16 1.000 Bilirubin Day 21 0.166 Bilirubin Day 28 0.596 Blood Day 9 0.102 Blood Day 16 0.359 Blood Day 21 1.000 Blood Day 28 0.002 †Insufficient variation to estimate p Value; all results from both groups were the same value. Discussion: the first paragraph is too long (Lines 348-390). We have edited and shortened the paragraph as requested. Line 438-440: please provide references for this statement on cystatin C. We have provided references as requested. Submitted filename: PONE-D-22-03958 Response to reviewers1.docx Click here for additional data file. 16 May 2022 Evaluation of renal injury and function biomarkers, including symmetric dimethylarginine (SDMA), in the rat passive Heymann nephritis (PHN) model PONE-D-22-03958R1 Dear Dr. Michael J Coyne, We’re pleased to inform you that your manuscript has been judged scientifically suitable for publication and will be formally accepted for publication once it meets all outstanding technical requirements. Within one week, you’ll receive an e-mail detailing the required amendments. When these have been addressed, you’ll receive a formal acceptance letter and your manuscript will be scheduled for publication. An invoice for payment will follow shortly after the formal acceptance. To ensure an efficient process, please log into Editorial Manager at http://www.editorialmanager.com/pone/, click the 'Update My Information' link at the top of the page, and double check that your user information is up-to-date. If you have any billing related questions, please contact our Author Billing department directly at authorbilling@plos.org. If your institution or institutions have a press office, please notify them about your upcoming paper to help maximize its impact. If they’ll be preparing press materials, please inform our press team as soon as possible -- no later than 48 hours after receiving the formal acceptance. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information, please contact onepress@plos.org. Kind regards, Prabhakar Orsu, PhD Academic Editor PLOS ONE Additional Editor Comments (optional): Accepted for Publication Reviewers' comments: 19 May 2022 PONE-D-22-03958R1 Evaluation of renal injury and function biomarkers, including symmetric dimethylarginine (SDMA), in the rat passive Heymann nephritis (PHN) model Dear Dr. Coyne: I'm pleased to inform you that your manuscript has been deemed suitable for publication in PLOS ONE. Congratulations! Your manuscript is now with our production department. If your institution or institutions have a press office, please let them know about your upcoming paper now to help maximize its impact. If they'll be preparing press materials, please inform our press team within the next 48 hours. Your manuscript will remain under strict press embargo until 2 pm Eastern Time on the date of publication. For more information please contact onepress@plos.org. If we can help with anything else, please email us at plosone@plos.org. Thank you for submitting your work to PLOS ONE and supporting open access. Kind regards, PLOS ONE Editorial Office Staff on behalf of Dr. Prabhakar Orsu Academic Editor PLOS ONE
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1.  Influence of thyroid hormones and transforming growth factor-β1 on cystatin C concentrations.

Authors:  N Kotajima; Y Yanagawa; T Aoki; K Tsunekawa; T Morimura; T Ogiwara; M Nara; M Murakami
Journal:  J Int Med Res       Date:  2010 Jul-Aug       Impact factor: 1.671

2.  Symmetric dimethylarginine (SDMA) as endogenous marker of renal function--a meta-analysis.

Authors:  Jan T Kielstein; Shelley R Salpeter; Stefanie M Bode-Boeger; John P Cooke; Danilo Fliser
Journal:  Nephrol Dial Transplant       Date:  2006-06-09       Impact factor: 5.992

3.  Rapid detection of acute kidney injury by plasma cystatin C in the intensive care unit.

Authors:  Maryam Nejat; John W Pickering; Robert J Walker; Zoltán H Endre
Journal:  Nephrol Dial Transplant       Date:  2010-03-28       Impact factor: 5.992

4.  Clusterin is up-regulated in glomerular mesangial cells in complement-mediated injury.

Authors:  K Yamada; Y Hori; N Hanafusa; T Okuda; N Nagano; N H Choi-Miura; W G Couser; T Miyata; K Kurokawa; T Fujita; M Nangaku
Journal:  Kidney Int       Date:  2001-01       Impact factor: 10.612

5.  Renal handling of radiolabelled human cystatin C in the rat.

Authors:  O Tenstad; A B Roald; A Grubb; K Aukland
Journal:  Scand J Clin Lab Invest       Date:  1996-08       Impact factor: 1.713

6.  Evaluation of the relative performance of 12 urinary biomarkers for renal safety across 22 rat sensitivity and specificity studies.

Authors:  Katerina Vlasakova; Zoltan Erdos; Sean P Troth; Kathleen McNulty; Valérie Chapeau-Campredon; Nathalie Mokrzycki; Nagaraja Muniappa; Yi-Zhong Gu; Daniel Holder; Wendy J Bailey; Frank D Sistare; Warren E Glaab
Journal:  Toxicol Sci       Date:  2013-12-21       Impact factor: 4.849

7.  Shedding of kidney injury molecule-1, a putative adhesion protein involved in renal regeneration.

Authors:  Veronique Bailly; Zhiwei Zhang; Werner Meier; Richard Cate; Michele Sanicola; Joseph V Bonventre
Journal:  J Biol Chem       Date:  2002-07-23       Impact factor: 5.157

8.  The Ngal reporter mouse detects the response of the kidney to injury in real time.

Authors:  Neal Paragas; Andong Qiu; Qingyin Zhang; Benjamin Samstein; Shi-Xian Deng; Kai M Schmidt-Ott; Melanie Viltard; Wenqiang Yu; Catherine S Forster; Gangli Gong; Yidong Liu; Ritwij Kulkarni; Kiyoshi Mori; Avtandil Kalandadze; Adam J Ratner; Prasad Devarajan; Donald W Landry; Vivette D'Agati; Chyuan-Sheng Lin; Jonathan Barasch
Journal:  Nat Med       Date:  2011-01-16       Impact factor: 53.440

9.  The Rat Grimace Scale: a partially automated method for quantifying pain in the laboratory rat via facial expressions.

Authors:  Susana G Sotocinal; Robert E Sorge; Austin Zaloum; Alexander H Tuttle; Loren J Martin; Jeffrey S Wieskopf; Josiane C S Mapplebeck; Peng Wei; Shu Zhan; Shuren Zhang; Jason J McDougall; Oliver D King; Jeffrey S Mogil
Journal:  Mol Pain       Date:  2011-07-29       Impact factor: 3.395

10.  Corticosteroids significantly increase cystatin C levels in the plasma by promoting cystatin C production in rats.

Authors:  Xiao-Ran Zhu; Ning Ge; Yu Wang; Jian-Long Zhai; Chao Liu
Journal:  Ren Fail       Date:  2019-11       Impact factor: 2.606

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