| Literature DB >> 35611229 |
Kinuko Ohneda1, Masahiro Hiratsuka1,2,3,4, Hiroshi Kawame1,5, Fuji Nagami1, Yoichi Suzuki1,6, Kichiya Suzuki1, Akira Uruno1, Mika Sakurai-Yageta1, Yohei Hamanaka1, Makiko Taira1, Soichi Ogishima1,2, Shinichi Kuriyama1,7,8, Atsushi Hozawa1, Hiroaki Tomita1, Naoko Minegishi1,2, Junichi Sugawara1,9,10, Inaho Danjoh1, Tomohiro Nakamura1, Tomoko Kobayashi1,11, Yumi Yamaguchi-Kabata1, Shu Tadaka1, Taku Obara1,4, Eiji Hishimuma1,2, Nariyasu Mano4, Masaki Matsuura4, Yuji Sato4, Masateru Nakasone4, Yohei Honkura12, Jun Suzuki12, Yukio Katori12, Yoichi Kakuta13, Atsushi Masamune13, Yoko Aoki14, Masaharu Nakayama15, Shigeo Kure1,11, Kengo Kinoshita1,2, Nobuo Fuse1,2, Masayuki Yamamoto1,2.
Abstract
Introduction: Pharmacogenomic (PGx) testing results provide valuable information on drug selection and appropriate dosing, maximization of efficacy, and minimization of adverse effects. Although the number of large-scale, next-generation-sequencing-based PGx studies has recently increased, little is known about the risks and benefits of returning PGx results to ostensibly healthy individuals in research settings.Entities:
Keywords: Pharmacogenomics; Population-based cohort study; Return of genomic results
Year: 2022 PMID: 35611229 PMCID: PMC9090545 DOI: 10.31662/jmaj.2021-0156
Source DB: PubMed Journal: JMA J ISSN: 2433-328X
Figure 1.Flow diagram of the study design.
The flow diagram of the study and the number of study participants are shown. QS: Questionnaire survey, ToMMo: Tohoku Medical Megabank Organization, TUH: Tohoku University Hospital.
Questionnaire Items.
| Timing of survey | QS1 | QS2 | QS3 | QS4 | QS5 |
|---|---|---|---|---|---|
| Seminar invitation | Informed consent | Return of genomic results | 6 months from QS3 | 12 months from QS3 | |
| K6 | ● | ● | ● | ● | ● |
| POMS-2 | ● | ● | ● | ● | |
| IES-R | ● | ● | ● | ||
| Knowledge about PGx | ● | ● | ● | ||
| Intent of participation | ● | ● | |||
| Satisfaction with participation | ● | ● | ● |
Genes and Drugs Eligible for Disclosure.
| Gene | Drug | CPIC guidelines | CPIC level | PharmGKB level of evidence | FDA-approved drug label |
|---|---|---|---|---|---|
| Aminoglycosides | |||||
| Clopidogrel | Yes | A | 1A | Actionable | |
| Voriconazole | Yes | A | 1A | Actionable | |
| Lansoprazole | Yes | A | 1A | Informative | |
| Omeprazole | Yes | A | 1A | Actionable | |
| Azathioprine | Yes | A | 1A | Testing recommended | |
| Mercaptopurine | Yes | A | 1A | Testing recommended |
Level Definitions for the CPIC Genes/Drugs are described in https://cpicpgx.org/prioritization/#flowchart. Clinical annotation levels of evidence for Pharm GKB are described in https://www.pharmgkb.org/page/clinAnnLevels.
Age and Sex Distribution.
| Age group | Male | Female |
|---|---|---|
| 20–29 | 0 | 0 |
| 30–39 | 7 | 8 |
| 40–49 | 8 | 8 |
| 50–59 | 12 | 19 |
| 60–69 | 14 | 23 |
| 70–79 | 23 | 30 |
| 80–89 | 6 | 2 |
| 90–99 | 0 | 1 |
| Total | 70 | 91 |
Genotyping Results of PGx Testing for the CYP2C19 and NUDT15 Genes.
Figure 2.Results report for research participants sent via mail.
English translation of representative results reports for participants carrying a CYP2C19 variant [poor metabolizer (PM)]. A, Page 1 (of 6 pages) of the report shows drugs that can be influenced by the presence of specific CYP2C19 polymorphisms. B, Page 2 of the results report shows detailed medicinal information and drug response with regard to metabolism status. Participants were advised to take the enclosed information to healthcare professionals, as necessary.
Figure 3.Summary results report for clinicians.
English translation of the representative results. The PGx results for genes are given in a table along with prescription recommendations. Information about the pilot study is included and accessible through the provided URL link along with the contact information included at the bottom of the report. Contact information is hidden for the manuscript.
Profiles of the MT-RNR1 m.1555A > G Variant Carriers.
| Case # | Age | Sex | Genotype | Presence of hearing loss | |
|---|---|---|---|---|---|
| Study participant | Families | ||||
| 70s | Female | Homoplasmy | Yes | Yes | |
| 70s | Female | Homoplasmy | No | Yes | |
| 70s | Female | Heteroplasmy | No | No | |
Figure 4.Questionnaire survey results before returning the genomic results.
The questionnaire survey results regarding past experience and problems with medication, knowledge of PGx, and expectations of PGx results are shown. The questionnaire was administered during the study recruitment phase, and answers were obtained from 223 participants, including seminar non-attendants.
Figure 5.Questionnaire survey results after returning the genomic results.
The questionnaire survey results regarding seminar and IC (A) and the results report (B) content comprehension are presented. The boxes at the bottom of each pie chart show the survey choices (a-f). Answers were obtained from 150 subjects who participated in the study. The percentage of the participants choosing answers A or B is shown at the bottom right.