| Literature DB >> 35610713 |
Yadessa Melaku1, Melat Solomon2, Rajalakshmanan Eswaramoorthy1,3, Uwe Beifuss4, Vladimir Ondrus5, Yalemtsehay Mekonnen6.
Abstract
BACKGROUND: Malaria remains the major health problem responsible for many mortality and morbidity in developing countries. Because of the development of resistance by Plasmodium species, searching effective antimalarial agents becomes increasingly important. Pinocembrin is a flavanone previously isolated as the most active antiplasmodial compound from the leaves of Dodonaea angustifolia. For a better understanding of the antiplasmodial activity, the synthesis of pinocembrin and a great number of analogs was undertaken.Entities:
Keywords: Catalytic hydrogenation; Chloropinocembrin; Claisen-Schmidt Condensation; Malaria; Pinocembrin; Plasmodium berghei
Year: 2022 PMID: 35610713 PMCID: PMC9128099 DOI: 10.1186/s13065-022-00831-z
Source DB: PubMed Journal: BMC Chem ISSN: 2661-801X
Fig. 1Synthesis of chalcones 5a-r
Fig. 2Synthesis of benzylated flavanones 6a-r
Fig. 3Synthesis of flavanones 7a-l
In vivo suppressive effect of pinocembrin and its analogs against P. berghei in Swiss albino mice
| No. | Doses (mg/kg) | Parasitological effect | MST ± SEM | Body Weight ± SEM | ||
|---|---|---|---|---|---|---|
| %Parasitaemia ± SEM | %Suppression | D0 | D4 | |||
| NC | 59.00 ± 0.78a | 0.00 | 7.00 ± 0.32 | 24.00 ± 0.63 | 22.92 ± 0.84 | |
| 15 | 57.00 ± 1.28b | 21.69 b | 9.60 ± 0.40 | 24.38 ± 0.91 | 23.38 ± 0.93 | |
| 20 | 40.00 ± 0.79 bc | 32.20 bc | 10.40 ± 0.87 | 22.98 ± 0.80 | 22.38 ± 0.57 | |
| 25 | 46.92 ± 1.17c | 35.92c | 12.00 ± 0.55 | 23.90 ± 0.78 | 23.36 ± 0.54 | |
| 30 | 38.08 ± 0.56c | 38.04c | 13.60 ± 0.87 | 23.44 ± 0.63 | 22.72 ± 0.53 | |
| 35 | 34.80 ± 0.86d | 49.09d | 11.60 ± 0.40 | 23.70 ± 0.56 | 22.87 ± 0.69 | |
| NC | 39.85 ± 0.80a | 0.00 | 7.60 ± 0.25 | 24.38 ± 0.56 | 23.60 ± 0.58 | |
| 20 | 29.62 ± 1.21b | 25.52b | 7.60 ± 0.68 | 23.92 ± 0.74 | 22.74 ± 0.64 | |
| NC | 77.40 ± 1.60a | 0.00 | 6.80 ± 0.66 | 23.68 ± 0.98 | 22.26 ± 0.93 | |
| 20 | 51.50 ± 1.14b | 33.46b | 11.80 ± 0.37 | 23.44 ± 0.78 | 22.74 ± 0.87 | |
| NC | 39.85 ± 0.80a | 0.00 | 7.60 ± 0.25 | 24.38 ± 0.56 | 23.60 ± 0.58 | |
| 30 | 36.23 ± 2.20a | 8.90 a | 6.60 ± 0.30 | 24.32 ± 0.45 | 22.60 ± 0.65 | |
| NC | 59.00 ± 0.78a | 0.00 | 7.00 ± 1.28 | 24.00 ± 0.63 | 22.92 ± 0.84 | |
| 20 | 26.14 ± 0.93b | 55.57b | 14.60 ± 0.51 | 24.52 ± 0.58 | 24.52 ± 0.56 | |
| NC | 73.22 ± 1.25a | 0.00 | 7.80 ± 0.37 | 23.66 ± 0.57 | 22.04 ± 0.46 | |
| 15 | 60.46 ± 0.78b | 17.42b | 8.80 ± 0.49 | 23.06 ± 0.60 | 22.06 ± 0.59 | |
| 25 | 51.30 ± 0.44c | 29.05c | 8.00 ± 0.45 | 23.12 ± 0.47 | 22.90 ± 1.02 | |
| 30 | 43.58 ± 0.62d | 40.45d | 13.6 ± 1.03 | 23.70 ± 0.68 | 23.50 ± 0.65 | |
| NC | 33.25 ± 1.16a | 0.00 | 7.40 ± 0.51 | 24.24 ± 0.64 | 23.50 ± 0.65 | |
| 20 | 8.5 0 ± 0.41b | 74.41b | 13.60 ± 1.25 | 23.70 ± 0.47 | 23.30 ± 0.49 | |
| 30 | 4.26 ± 0.13c | 87.19c | 14.40 ± 0.87 | 24.54 ± 0.58 | 24.06 ± 0.63 | |
| C | 30 | 0.00 | 100.00 | 21 < | ||
Negative control; Means with different letters are significantly different (P < 0.05); P-value is set for the comparison between treated and NC groups; CQ: Chloroquine; 1has been used as positive control for the test of all compounds
Effect of pinocembrin and its analogs on PCV of P. berghei infected mice
| No. | Dose | PCV ± SME | % Change | P value | |
|---|---|---|---|---|---|
| D 0 | D 4 | ||||
| NC | 51.11 ± 0.63 | 48.47 ± 0.42 | − 5.16 | 0.01 | |
| 15 | 51.25 ± 0.21 | 50.83 ± 0.52 | − 0.82 | 0.10 | |
| 25 | 51.13 ± 0.15 | 49.93 ± 0.41 | − 2.35 | 0.06 | |
| 30 | 51.02 ± 0.13 | 50.04 ± 0.31 | − 1.92 | 0.10 | |
| 35 | 50.75 ± 0.24 | 50.55 ± 0.32 | − 0.40 | 0.30 | |
| NC | 51.38 ± 0.25 | 48.76 ± 0.40 | − 5.10 | 0.01 | |
| 20 | 51.20 ± 0.20 | 50.19 ± 0.27 | − 2.00 | 0.08 | |
| NC | 51.11 ± 0.63 | 48.47 ± 0.42 | − 5.16 | 0.01 | |
| 20 | 50.84 ± 0.40 | 51.00 ± 0.31 | 0.32 | 0.31 | |
| NC | 51.38 ± 0.25 | 48.76 ± 0.31 | − 5.10 | 0.01 | |
| 30 | 51.16 ± 0.35 | 49.79 ± 0.40 | − 2.67 | 0.04 | |
| NC | 51.38 ± 0.31 | 47.98 ± 0.56 | − 6.62 | 0.00 | |
| 15 | 51.09 ± 0.19 | 49.89 ± 0.24 | − 2.35 | 0.06 | |
| 25 | 50.78 ± 0.29 | 50.00 ± 0.35 | − 1.54 | 0.10 | |
| 35 | 51.26 ± 0.21 | 51.09 ± 0.23 | − 0.33 | 0.37 | |
| NC | 50.98 ± 0.64 | 49.68 ± 0.20 | − 2.55 | 0.04 | |
| 20 | 50.38 ± 0.40 | 50.66 ± 0.45 | 0.56 | 0.21 | |
| 30 | 50.76 ± 0.16 | 51.00 ± 0.12 | 0.47 | 0.30 | |
Molecular docking simulation of compounds 7a-l against P. falciparum dihydrofolate reductase-thymidylate synthase
| No. | Formula | Binding affinity (Kcal/mol) | H-bond | Residual interactions | |
|---|---|---|---|---|---|
| Hydrophobic/Pi-Cation | Van der Waals | ||||
| C15H12O4 | − 8.1 | Ala-16 | Leu-46, Leu-40, Phe-58, Met-55, Leu-119, Ile-112, | Cys-15, Ser-167, Gly-166, Tyr-170 | |
| C17H16O6 | − 8.1 | Asp-54, Ala-16 | Leu-40, Leu-46, Phe-58, Met-55 | Cys-15, Gly-44, Val-45, Ile-164, Ser-111, Gly-41, Ser-167, Tyr-170 | |
| C15H11ClO4 | − 8.2 | Ser-111, Ser-167, Ile-164 | Ala-16, Ile-14, Cys-15, Leu-40, Phe-58 | Asp-54, Gly-44, Ser-108, Gly-41, Gly-166, Tyr-170 | |
| C18H18O7 | − 8.2 | Ala-16, Leu-40, Ser-108, Asn-42, Gly-44, Thr-107 | Leu-46, Ile-112, Val-195 | Lys-43, Val-45, Gly-41, Val-168, Ser-167, Ile-164, Tyr-170 | |
| C15H10Cl2O4 | − 8.2 | Gly-44 | Phe-58, Ser-167 | Ala-16, Asp-54, Ile-164, Ser-108, Thr-107, Val-45, Gly-166, Tyr-170 | |
| C15H11ClO4 | − 8.4 | Ser-111, Ile-164 | Ala-16, Cys-15, Leu-46, Trp-48, Leu-40 | Ile-14, Phe-58, Asp-54, Ser-108, Gly-44, Gly-166, Ser-167, Val-195, Tyr-170 | |
| C15H11ClO4 | − 8.3 | Ser-108, Ser-111, Ser-167 | Ala-16, Leu-40, Phe-58, Met-55 | Asp-54, Cys-15, Leu-46, Thr-107, Gly-41, Gly-166 | |
| C15H10Cl2O4 | − 8.3 | Ser-111, Ser-167 | Ala-16, Leu-46, Trp-48, Ile-14, Cys-15, Phe-58, Leu-40 | Gl-41, Gly-166, Ser-108, Ile-164, Thr-185, Tyr-170 | |
| C15H10Cl2O4 | − 8.3 | – | Ala-16, Phe-58, Ser-167 | Asp-54, Leu-46, Cys-15, Ser-108, Ser-111, Gly-44, Thr-107, Val-195, Gly-166, Leu-40, Ile-164, Tyr-170 | |
| C15H12O4 | − 8.1 | Ser-108, Ile-164 | Val-195, Thr-107 | Asn-42, Val-45, Gly-41, Ser-111, leu-40, Gly-165, Gly-166, Ser-167, Val-168 | |
| C17H16O6 | − 8.4 | Gly-44, Ser-167 | Ala-16, Leu-46, Phe-58, Ile-112, Leu-119, Ile-164 | Ser-108, Ser-111, Thr-107, Val-45, Val-195, Ggly-166, Tyr-170 | |
| C15H11ClO4 | − 8.4 | Ser-167 | Ala-16, Leu-46, Phe-58, Ile-165 | Cys-15, Asp-54, Ser-108, Ser-111, Gly-166, Tyr-170 | |
| C18H26ClN3 | − 7.2 | Ile-164 | Ala-16, Ile-14, Phe-58 | Asp-54, Trp-48, Cys-15, Leu-46, Ser-108, Ser-111, Val-45, Gly-44, Asn-42, Gly-41, Leu-40, Gly-166, Gly-165, Tyr-170 | |
Fig. 42D and 3D binding interactions of 7k against Plasmodium falciparum dihydrofolate reductase-thymidylate synthase
Fig. 52D and 3D binding interactions of 7l against Plasmodium falciparum dihydrofolate reductase-thymidylate synthase
Fig. 62D and 3D binding interactions of CQ against Plasmodium falciparum dihydrofolate reductase-thymidylate synthase
Drug-likeness predictions of compounds 7a-l computed by SwissADME
| S. No. | Formula | Mol.Wt. (g/mol) | NHD | NHA | NRB | TPSA (A°2) | LogP (cLogP) | Lipinski’s rule of Five Violation |
|---|---|---|---|---|---|---|---|---|
| 7a | C15H12O4 | 256.25 | 2 | 4 | 1 | 66.76 | 2.11 | 0 |
| 7b | C17H16O6 | 316.31 | 2 | 6 | 3 | 85.22 | 2.71 | 0 |
| 7c | C15H11ClO4 | 290.7 | 2 | 4 | 1 | 66.76 | 2.37 | 0 |
| 7d | C18H18O7 | 346.33 | 2 | 7 | 4 | 94.45 | 2.9 | 0 |
| 7e | C15H10Cl2O4 | 325.14 | 2 | 4 | 1 | 66.76 | 2.43 | 0 |
| 7f | C15H11ClO4 | 290.7 | 2 | 4 | 1 | 66.76 | 2.36 | 0 |
| 7g | C15H11ClO4 | 290.7 | 2 | 4 | 1 | 66.76 | 2.39 | 0 |
| 7h | C15H10Cl2O4 | 325.14 | 2 | 4 | 1 | 66.76 | 2.58 | 0 |
| 7i | C15H10Cl2O4 | 325.14 | 2 | 4 | 1 | 66.76 | 1.91 | 0 |
| 7j | C15H12O4 | 325.14 | 2 | 4 | 1 | 66.76 | 2.53 | 0 |
| 7k | C17H16O6 | 325.14 | 2 | 4 | 1 | 66.76 | 2.57 | 0 |
| 7l | C15H11ClO4 | 325.14 | 2 | 4 | 1 | 66.76 | 2.56 | 0 |
| CQ | C18H26ClN3 | 319.87 | 1 | 2 | 8 | 28.16 | 3.95 | 0 |
NHD Number of Hydrogen donor, NHA Number of Hydrogen acceptor, NRB Number of rotatable bonds, TPSA total polar surface area, CQ chloroquine
ADME predictions of compounds 7a-l computed by SwissADME and PreADMET
| No. | Chemical Formula | Skin Permeation Value (log Kp) cm/s | GI Absorption | BBB Permeability | Inhibitor Interaction (SwissADME/PreADMET) | |||||
|---|---|---|---|---|---|---|---|---|---|---|
| P-gp substrate | CYP1A2 inhibitor | CYP2C19 inhibitor | CYP2C9 inhibitor | CYP2D6 inhibitor | CYP3A4 inhibitor | |||||
| C15H12O4 | − 5.82 | High | Yes | No | Yes | Yes | No | No | No | |
| C17H16O6 | − 6.23 | High | No | No | Yes | No | Yes | No | Yes | |
| C15H11ClO4 | − 5.59 | High | Yes | No | Yes | Yes | Yes | Yes | Yes | |
| C18H18O7 | − 6.35 | High | No | Yes | Yes | No | Yes | No | Yes | |
| C15H10Cl2O4 | − 5.29 | High | Yes | No | Yes | Yes | Yes | Yes | Yes | |
| C15H11ClO4 | − 5.52 | High | Yes | No | Yes | Yes | Yes | Yes | Yes | |
| C15H11ClO4 | − 5.52 | High | Yes | No | Yes | Yes | Yes | Yes | Yes | |
| C15H10Cl2O4 | − 5.35 | High | Yes | No | Yes | Yes | Yes | Yes | Yes | |
| C15H10Cl2O4 | − 5.29 | High | Yes | No | Yes | Yes | Yes | Yes | Yes | |
| C15H12O4 | − 5.35 | High | Yes | No | Yes | Yes | Yes | Yes | Yes | |
| C17H16O6 | − 5.29 | High | Yes | No | Yes | Yes | Yes | Yes | Yes | |
| C15H11ClO4 | − 5.45 | High | Yes | No | Yes | Yes | Yes | Yes | Yes | |
| C18H26ClN3 | − 4.96 | High | Yes | No | Yes | No | No | Yes | Yes | |
CQ Chloroquine, GI Gastro-Intestinal, BBB Blood Brain Barrier, P-gp P-glycoprotein, CYP Cytochrome-P