Literature DB >> 35609383

The expanding role of split protein complementation in opsin-free optogenetics.

Savanna Sharum Skeeters1, Tyler Camp1, Huaxun Fan1, Kai Zhang2.   

Abstract

A comprehensive understanding of signaling mechanisms helps interpret fundamental biological processes and restore cell behavior from pathological conditions. Signaling outcome depends not only on the activity of each signaling component but also on their dynamic interaction in time and space, which remains challenging to probe by biochemical and cell-based assays. Opsin-based optogenetics has transformed neural science research with its spatiotemporal modulation of the activity of excitable cells. Motivated by this advantage, opsin-free optogenetics extends the power of light to a larger spectrum of signaling molecules. This review summarizes commonly used opsin-free optogenetic strategies, presents a historical overview of split protein complementation, and highlights the adaptation of split protein recombination as optogenetic sensors and actuators.
Copyright © 2022 Elsevier Ltd. All rights reserved.

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Year:  2022        PMID: 35609383      PMCID: PMC9308681          DOI: 10.1016/j.coph.2022.102236

Source DB:  PubMed          Journal:  Curr Opin Pharmacol        ISSN: 1471-4892            Impact factor:   4.768


  88 in total

1.  Combinatorial library screening for developing an improved split-firefly luciferase fragment-assisted complementation system for studying protein-protein interactions.

Authors:  Ramasamy Paulmurugan; Sanjiv S Gambhir
Journal:  Anal Chem       Date:  2007-02-13       Impact factor: 6.986

2.  Eris: an automated estimator of protein stability.

Authors:  Shuangye Yin; Feng Ding; Nikolay V Dokholyan
Journal:  Nat Methods       Date:  2007-06       Impact factor: 28.547

3.  PIF3, a phytochrome-interacting factor necessary for normal photoinduced signal transduction, is a novel basic helix-loop-helix protein.

Authors:  M Ni; J M Tepperman; P H Quail
Journal:  Cell       Date:  1998-11-25       Impact factor: 41.582

4.  Oligomerization domain-directed reassembly of active dihydrofolate reductase from rationally designed fragments.

Authors:  J N Pelletier; F X Campbell-Valois; S W Michnick
Journal:  Proc Natl Acad Sci U S A       Date:  1998-10-13       Impact factor: 11.205

5.  Photo-SNAP-tag, a Light-Regulated Chemical Labeling System.

Authors:  Joseph D Cleveland; Chandra L Tucker
Journal:  ACS Chem Biol       Date:  2020-07-16       Impact factor: 5.100

6.  An infrared reporter to detect spatiotemporal dynamics of protein-protein interactions.

Authors:  Emmanuelle Tchekanda; Durga Sivanesan; Stephen W Michnick
Journal:  Nat Methods       Date:  2014-04-20       Impact factor: 28.547

Review 7.  Applications of Optobiology in Intact Cells and Multicellular Organisms.

Authors:  John S Khamo; Vishnu V Krishnamurthy; Savanna R Sharum; Payel Mondal; Kai Zhang
Journal:  J Mol Biol       Date:  2017-09-04       Impact factor: 5.469

8.  Light-activated reassembly of split green fluorescent protein.

Authors:  Kevin P Kent; Steven G Boxer
Journal:  J Am Chem Soc       Date:  2011-02-25       Impact factor: 15.419

9.  An optimized optogenetic clustering tool for probing protein interaction and function.

Authors:  Amir Taslimi; Justin D Vrana; Daniel Chen; Sofya Borinskaya; Bruce J Mayer; Matthew J Kennedy; Chandra L Tucker
Journal:  Nat Commun       Date:  2014-09-18       Impact factor: 14.919

10.  Highly accurate protein structure prediction with AlphaFold.

Authors:  John Jumper; Richard Evans; Alexander Pritzel; Tim Green; Michael Figurnov; Olaf Ronneberger; Kathryn Tunyasuvunakool; Russ Bates; Augustin Žídek; Anna Potapenko; Alex Bridgland; Clemens Meyer; Simon A A Kohl; Andrew J Ballard; Andrew Cowie; Bernardino Romera-Paredes; Stanislav Nikolov; Rishub Jain; Demis Hassabis; Jonas Adler; Trevor Back; Stig Petersen; David Reiman; Ellen Clancy; Michal Zielinski; Martin Steinegger; Michalina Pacholska; Tamas Berghammer; Sebastian Bodenstein; David Silver; Oriol Vinyals; Andrew W Senior; Koray Kavukcuoglu; Pushmeet Kohli
Journal:  Nature       Date:  2021-07-15       Impact factor: 49.962

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