Literature DB >> 17538626

Eris: an automated estimator of protein stability.

Shuangye Yin, Feng Ding, Nikolay V Dokholyan.   

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Year:  2007        PMID： 17538626     DOI： 10.1038/nmeth0607-466

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  164 in total

1.  Predicting folding free energy changes upon single point mutations.

Authors:  Zhe Zhang; Lin Wang; Yang Gao; Jie Zhang; Maxim Zhenirovskyy; Emil Alexov
Journal:  Bioinformatics       Date:  2012-01-11       Impact factor: 6.937

2.  Real value prediction of protein folding rate change upon point mutation.

Authors:  Liang-Tsung Huang; M Michael Gromiha
Journal:  J Comput Aided Mol Des       Date:  2012-03-18       Impact factor: 3.686

3.  Experimental library screening demonstrates the successful application of computational protein design to large structural ensembles.

Authors:  Benjamin D Allen; Alex Nisthal; Stephen L Mayo
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-02       Impact factor: 11.205

Review 4.  Approaches for probing the sequence space of substrates recognized by molecular chaperones.

Authors:  Pradeep Kota; Nikolay V Dokholyan
Journal:  Methods       Date:  2010-12-30       Impact factor: 3.608

5.  Using a second-order differential model to fit data without baselines in protein isothermal chemical denaturation.

Authors:  Chuanning Tang; Scott Lew; Dacheng He
Journal:  Protein Sci       Date:  2016-02-11       Impact factor: 6.725

Review 6.  Computational approaches to study the effects of small genomic variations.

Authors:  Kamil Khafizov; Maxim V Ivanov; Olga V Glazova; Sergei P Kovalenko
Journal:  J Mol Model       Date:  2015-09-08       Impact factor: 1.810

7.  Identification of an actin binding surface on vinculin that mediates mechanical cell and focal adhesion properties.

Authors:  Peter M Thompson; Caitlin E Tolbert; Kai Shen; Pradeep Kota; Sean M Palmer; Karen M Plevock; Albina Orlova; Vitold E Galkin; Keith Burridge; Edward H Egelman; Nikolay V Dokholyan; Richard Superfine; Sharon L Campbell
Journal:  Structure       Date:  2014-03-27       Impact factor: 5.006

8.  Reversible and Tunable Photoswitching of Protein Function through Genetic Encoding of Azobenzene Amino Acids in Mammalian Cells.

Authors:  Ji Luo; Subhas Samanta; Marino Convertino; Nikolay V Dokholyan; Alexander Deiters
Journal:  Chembiochem       Date:  2018-10-02       Impact factor: 3.164

9.  Comprehensive optimization of a single-chain variable domain antibody fragment as a targeting ligand for a cytotoxic nanoparticle.

Authors:  Kathy Zhang; Melissa L Geddie; Neeraj Kohli; Tad Kornaga; Dmitri B Kirpotin; Yang Jiao; Rachel Rennard; Daryl C Drummond; Ulrik B Nielsen; Lihui Xu; Alexey A Lugovskoy
Journal:  MAbs       Date:  2015       Impact factor: 5.857

10.  Misfolding of galactose 1-phosphate uridylyltransferase can result in type I galactosemia.

Authors:  Thomas J McCorvie; Tyler J Gleason; Judith L Fridovich-Keil; David J Timson
Journal:  Biochim Biophys Acta       Date:  2013-04-11
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