Literature DB >> 35608627

Ratio of Hydrophobic-Hydrophilic and Positive-Negative Residues at Lipid-Water-Interface Influences Surface Expression and Channel Gating of TRPV1.

Somdatta Saha1,2, Sushama Mohanta1,2, Rashmita Das1,2, Ritesh Dalai1,2, Nikhil Tiwari1,2, Ankit Tiwari1, Abhishek Kumar3,4, Chandan Goswami5,6.   

Abstract

During evolution, TRPV1 has lost, retained or selected certain residues at Lipid-Water-Interface (LWI) and formed specific patterns there. The ratio of "hydrophobic-hydrophilic" and "positive-negative-charged" residues at the inner LWI remains conserved throughout vertebrate evolution and plays important role in regulating TRPV1 trafficking and localization. Arg575 is an important residue as Arg575Asp mutant has reduced surface expression, co-localization with lipid raft markers, cell area and increased cell lethality. This lethality is most likely due to the disruption of the ratio between positive-negative charges caused by the mutation. Such lethality can be rescued by either using TRPV1-specfic inhibitor 5'-IRTX or by restoring the positive-negative charge ratio at that position, i.e. by introducing Asp576Arg mutation in Arg575Asp backbone. We propose that Arg575Asp mutation confers TRPV1 in a "constitutive-open-like" condition. These findings have broader implication in understanding the molecular evolution of thermo-sensitive ion channels and the micro-environments involved in processes that goes erratic in different diseases. The segment of TRPV1 that is present at the inner lipid-water-interface (LWI) has a specific pattern of amino acid combinations. The overall ratio of +ve charge /-ve charge and the ratio of hydrophobicity/hydrophilicity remain constant throughout the vertebrate evolution (ca 450 million years). This specific pattern is not observed in the outer LWI region of TRPV1.
© 2022. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Amino acid pattern; Capsaicin; Channelopathy; Lipid raft; Lipid–Water-Interface; Molecular evolution

Mesh:

Substances:

Year:  2022        PMID: 35608627     DOI: 10.1007/s00232-022-00243-z

Source DB:  PubMed          Journal:  J Membr Biol        ISSN: 0022-2631            Impact factor:   1.843


  46 in total

1.  The effect of interactions involving ionizable residues flanking membrane-inserted hydrophobic helices upon helix-helix interaction.

Authors:  Scott Lew; Gregory A Caputo; Erwin London
Journal:  Biochemistry       Date:  2003-09-16       Impact factor: 3.162

2.  A molecular framework for temperature-dependent gating of ion channels.

Authors:  Sandipan Chowdhury; Brian W Jarecki; Baron Chanda
Journal:  Cell       Date:  2014-08-21       Impact factor: 41.582

3.  Inhibition of nociceptors by TRPV1-mediated entry of impermeant sodium channel blockers.

Authors:  Alexander M Binshtok; Bruce P Bean; Clifford J Woolf
Journal:  Nature       Date:  2007-10-04       Impact factor: 49.962

Review 4.  Structure-Driven Pharmacology of Transient Receptor Potential Channel Vanilloid 1.

Authors:  Ignacio Díaz-Franulic; Javier Caceres-Molina; Romina V Sepulveda; Fernando Gonzalez-Nilo; Ramon Latorre
Journal:  Mol Pharmacol       Date:  2016-06-22       Impact factor: 4.436

5.  Effects of rhDecorin on TGF-beta1 induced human hepatic stellate cells LX-2 activation.

Authors:  Yue-Feng Shi; Qi Zhang; Pik-Yuen Cheung; Lin Shi; Chi-Chun Fong; Yaou Zhang; Chi-Hung Tzang; Bernard P L Chan; Wang-Fun Fong; Jay Chun; Hsiang-fu Kung; Mengsu Yang
Journal:  Biochim Biophys Acta       Date:  2006-09-26

6.  TRPV4 expresses in bone cell lineages and TRPV4-R616Q mutant causing Brachyolmia in human reveals "loss-of-interaction" with cholesterol.

Authors:  Rashmita Das; Chandan Goswami
Journal:  Biochem Biophys Res Commun       Date:  2019-08-03       Impact factor: 3.575

7.  Understanding TRPV1 activation by ligands: Insights from the binding modes of capsaicin and resiniferatoxin.

Authors:  Khaled Elokely; Phanindra Velisetty; Lucie Delemotte; Eugene Palovcak; Michael L Klein; Tibor Rohacs; Vincenzo Carnevale
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-30       Impact factor: 11.205

8.  Heat Sensing Receptor TRPV1 Is a Mediator of Thermotaxis in Human Spermatozoa.

Authors:  Luca De Toni; Andrea Garolla; Massimo Menegazzo; Sabina Magagna; Andrea Di Nisio; Iva Šabović; Maria Santa Rocca; Valentina Scattolini; Andrea Filippi; Carlo Foresta
Journal:  PLoS One       Date:  2016-12-16       Impact factor: 3.240

9.  Arginine-rich cell-penetrating peptides induce membrane multilamellarity and subsequently enter via formation of a fusion pore.

Authors:  Christoph Allolio; Aniket Magarkar; Piotr Jurkiewicz; Katarína Baxová; Matti Javanainen; Philip E Mason; Radek Šachl; Marek Cebecauer; Martin Hof; Dominik Horinek; Veronika Heinz; Reinhard Rachel; Christine M Ziegler; Adam Schröfel; Pavel Jungwirth
Journal:  Proc Natl Acad Sci U S A       Date:  2018-11-05       Impact factor: 11.205

10.  Ultrasensitive fluorescent proteins for imaging neuronal activity.

Authors:  Tsai-Wen Chen; Trevor J Wardill; Yi Sun; Stefan R Pulver; Sabine L Renninger; Amy Baohan; Eric R Schreiter; Rex A Kerr; Michael B Orger; Vivek Jayaraman; Loren L Looger; Karel Svoboda; Douglas S Kim
Journal:  Nature       Date:  2013-07-18       Impact factor: 49.962

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