Literature DB >> 12962508

The effect of interactions involving ionizable residues flanking membrane-inserted hydrophobic helices upon helix-helix interaction.

Scott Lew1, Gregory A Caputo, Erwin London.   

Abstract

We examined the effect of ionizable residues at positions flanking the hydrophobic core of helix-forming polyLeu peptides upon helix-helix interactions within model membrane vesicles composed of dioleoylphosphatidylcholine. The peptides studied were flanked on both the N and C termini either by two Lys (K(2)-flanked peptide), one Lys plus one Asp (DK-flanked peptide), or one Lys plus three Asp (KD(3)-flanked peptide). The fluorescence of a Trp residue positioned at the center of the hydrophobic sequence was used to evaluate peptide behavior. As judged by the concentration dependence of the maximum wavelength of Trp emission, there was significant oligomerization of the KD(3)- and DK-flanked peptides, but not the K(2)-flanked peptide, at neutral pH. At neutral pH mixtures of K(2)- and KD(3)-flanked peptides associated with each other, but mixtures of the K(2)- and DK-flanked peptides did not. Oligomerization by the DK- and KD(3)-flanked peptides decreased under low pH conditions in which the Asp residues were protonated. Additional experiments showed that at neutral pH the KD(3)-flanked peptide showed an increased tendency to oligomerize when as little as 10-15 mol % of an anionic lipid, phosphatidylglycerol, was present. The behavior of the other peptides was not strongly influenced by phosphatidylglycerol. These results can largely be explained by modulation of helix-helix interactions via electrostatic interactions involving the helix-flanking ionizable residues. Such interactions may influence membrane protein folding. The self-association of anionic KD(3)-flanked peptides suggests that additional interactions involving charged residues also can modulate helix-helix association.

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Year:  2003        PMID: 12962508     DOI: 10.1021/bi034929i

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  18 in total

1.  Quantification of helix-helix binding affinities in micelles and lipid bilayers.

Authors:  Andrei L Lomize; I D Pogozheva; H I Mosberg
Journal:  Protein Sci       Date:  2004-08-31       Impact factor: 6.725

2.  Oligomerization of Sulfolobus solfataricus signature amidase is promoted by acidic pH and high temperature.

Authors:  Anna Scotto D'Abusco; Rita Casadio; Gianluca Tasco; Laura Giangiacomo; Anna Giartosio; Valentina Calamia; Stefania Di Marco; Roberta Chiaraluce; Valerio Consalvi; Roberto Scandurra; Laura Politi
Journal:  Archaea       Date:  2005-12       Impact factor: 3.273

3.  Molecular dynamics simulations of model trans-membrane peptides in lipid bilayers: a systematic investigation of hydrophobic mismatch.

Authors:  Senthil K Kandasamy; Ronald G Larson
Journal:  Biophys J       Date:  2006-01-20       Impact factor: 4.033

4.  A monomeric membrane peptide that lives in three worlds: in solution, attached to, and inserted across lipid bilayers.

Authors:  Yana K Reshetnyak; Michael Segala; Oleg A Andreev; Donald M Engelman
Journal:  Biophys J       Date:  2007-06-08       Impact factor: 4.033

5.  Effect of sequence hydrophobicity and bilayer width upon the minimum length required for the formation of transmembrane helices in membranes.

Authors:  Shyam S Krishnakumar; Erwin London
Journal:  J Mol Biol       Date:  2007-09-20       Impact factor: 5.469

6.  pH-, temperature- and ion-dependent oligomerization of Sulfolobus solfataricus recombinant amidase: a study with site-specific mutants.

Authors:  Laura Politi; Emilia Chiancone; Laura Giangiacomo; Laura Cervoni; Anna Scotto d'Abusco; Stefano Scorsino; Roberto Scandurra
Journal:  Archaea       Date:  2009-02-17       Impact factor: 3.273

Review 7.  Orientation and dynamics of transmembrane peptides: the power of simple models.

Authors:  Andrea Holt; J Antoinette Killian
Journal:  Eur Biophys J       Date:  2009-12-18       Impact factor: 1.733

8.  Investigation of the structure-activity relationship in ponericin L1 from Neoponera goeldii.

Authors:  Alexandria S Senetra; Matthew R Necelis; Gregory A Caputo
Journal:  Pept Sci (Hoboken)       Date:  2020-03-31

9.  Using infrared spectroscopy of cyanylated cysteine to map the membrane binding structure and orientation of the hybrid antimicrobial peptide CM15.

Authors:  Katherine N Alfieri; Alice R Vienneau; Casey H Londergan
Journal:  Biochemistry       Date:  2011-12-02       Impact factor: 3.162

10.  The control of transmembrane helix transverse position in membranes by hydrophilic residues.

Authors:  Shyam S Krishnakumar; Erwin London
Journal:  J Mol Biol       Date:  2007-10-17       Impact factor: 5.469

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