Literature DB >> 35605974

Full-Atomistic Optimized Potentials for Liquid Simulations and Polymer Consistent Force Field Models for Biocompatible Shape-Memory Poly(ε-caprolactone).

Irena Yungerman1, Ilya Starodumov2,3, Ailifeire Fulati4, Koichiro Uto4, Mitsuhiro Ebara4, Yevgeny Moskovitz1,2.   

Abstract

Thermally induced shape memory poly(ε-caprolactone) (PCL)-based polymers are one of the most extensively researched families of biocompatible materials. They are degradable under physiological conditions and have high applicability in general biomedical engineering, with cross-linked PCL networks being particularly useful for tissue engineering. In this study, we used the optimized potentials for liquid simulations (OPLS) force field, which is well suited for describing intermolecular interactions in biomolecules, and the class II polymer consistent force field (PCFF) to investigate the properties of telechelic PCL with diacrylates as reactive functionalities on its end groups. PCFF has been specifically parameterized for simulating synthetic polymeric materials. We compare the findings of all-atom molecular dynamics simulations with known experimental data and theoretical assumptions to verify the applicability of both these force fields. We estimated the melt density, volume, transition temperatures, and mechanical characteristics of two-branched PCL diacrylates with a molecular weight of 2481 Da. Our findings point to the utility of the aforementioned force fields in predicting the properties of PCL-based polymers. It also opens avenues for developing PCL cross-linked polymer models and employing OPLS to investigate the interactions of synthetic polymers with biomolecules.

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Year:  2022        PMID: 35605974      PMCID: PMC9169671          DOI: 10.1021/acs.jpcb.2c01973

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   3.466


  21 in total

Review 1.  Protein-polymer conjugates: synthetic approaches by controlled radical polymerizations and interesting applications.

Authors:  Gregory N Grover; Heather D Maynard
Journal:  Curr Opin Chem Biol       Date:  2010-11-10       Impact factor: 8.822

2.  Characterization of biodegradable polyurethane nanoparticles and thermally induced self-assembly in water dispersion.

Authors:  Chun-Wei Ou; Chiu-Hun Su; U-Ser Jeng; Shan-hui Hsu
Journal:  ACS Appl Mater Interfaces       Date:  2014-04-01       Impact factor: 9.229

3.  Temperature-responsive cross-linked poly(epsilon-caprolactone) membrane that functions near body temperature.

Authors:  Koichiro Uto; Kazuya Yamamoto; Shohei Hirase; Takao Aoyagi
Journal:  J Control Release       Date:  2005-12-05       Impact factor: 9.776

4.  Derivation of force fields for molecular mechanics and dynamics from ab initio energy surfaces.

Authors:  J R Maple; U Dinur; A T Hagler
Journal:  Proc Natl Acad Sci U S A       Date:  1988-08       Impact factor: 11.205

5.  Scaffolds from block polyurethanes based on poly(ɛ-caprolactone) (PCL) and poly(ethylene glycol) (PEG) for peripheral nerve regeneration.

Authors:  Yuqing Niu; Kevin C Chen; Tao He; Wenying Yu; Shuiwen Huang; Kaitian Xu
Journal:  Biomaterials       Date:  2014-02-26       Impact factor: 12.479

6.  Mechanical properties of single electrospun drug-encapsulated nanofibres.

Authors:  Sing Yian Chew; Todd C Hufnagel; Chwee Teck Lim; Kam W Leong
Journal:  Nanotechnology       Date:  2006-08-14       Impact factor: 3.874

7.  Determining the mechanical properties of electrospun poly-ε-caprolactone (PCL) nanofibers using AFM and a novel fiber anchoring technique.

Authors:  Stephen R Baker; Soham Banerjee; Keith Bonin; Martin Guthold
Journal:  Mater Sci Eng C Mater Biol Appl       Date:  2015-10-23       Impact factor: 7.328

Review 8.  Poly-epsilon-caprolactone microspheres and nanospheres: an overview.

Authors:  V R Sinha; K Bansal; R Kaushik; R Kumria; A Trehan
Journal:  Int J Pharm       Date:  2004-06-18       Impact factor: 5.875

9.  Application of high-strength biodegradable polyurethanes containing different ratios of biobased isomannide and poly (ϵ-caprolactone) diol.

Authors:  Dong-In Lim; Hyung-Seok Park; Jeong-Hui Park; Jonathan C Knowles; Myoung-Seon Gong
Journal:  J Bioact Compat Polym       Date:  2013-05       Impact factor: 1.756

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