| Literature DB >> 35602622 |
S Latha1, P Muthu2, Samiappan Dhanalakshmi1, R Kumar1, Khin Wee Lai3, Xiang Wu4.
Abstract
Plaque deposits in the carotid artery are the major cause of stroke and atherosclerosis. Ultrasound imaging is used as an early indicator of disease progression. Classification of the images to identify plaque presence and intima-media thickness (IMT) by machine learning algorithms requires features extracted from the images. A total of 361 images were used for feature extraction, which will assist in further classification of the carotid artery. This study presents the extraction of 65 features, which constitute of shape, texture, histogram, correlogram, and morphology features. Principal component analysis (PCA)-based feature selection is performed, and the 22 most significant features, which will improve the classification accuracy, are selected. Naive Bayes algorithm and dynamic learning vector quantization (DLVQ)-based machine learning classifications are performed with the extracted and selected features, and analysis is performed.Entities:
Mesh:
Year: 2022 PMID: 35602622 PMCID: PMC9119795 DOI: 10.1155/2022/1847981
Source DB: PubMed Journal: Comput Intell Neurosci
Figure 1Sample carotid artery ultrasound image (a) with plaque and (b) without plaque.
Figure 2Block diagram of classification system.
Figure 3Feature extraction, selection, and classification of carotid artery ultrasound images.
List of extracted features.
| Sl. no | Feature type | Features |
|---|---|---|
| 1 | Texture features (33) | Gray-level co-occurrence matrix (GLCM)—inertia, energy, correlation, contrast, entropy, and homogeneity |
| Gabor wavelet | ||
| Statistical features—mean, median, kurtosis, and skewness | ||
| Local binary pattern (LBP)—textures spatial structure | ||
| Gray-level difference statistics (GLDS)—mean, entropy, contrast, angular second moment, and homogeneity | ||
| Fractal dimension texture analysis (FDTA) | ||
| Radial and angular sum of discrete Fourier transform for Fourier power spectrum | ||
| Neighborhood gray-tone difference matrix (NGTDM), given by strength, complexity, coarseness, and contrast | ||
| Absolute gradient—mean, variance | ||
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| 2 | Shape features (5) | Sharpness |
| Complexity | ||
| Length irregularity | ||
| Aspect ratio and circularity | ||
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| 3 | Histogram and correlogram features (10) | Gray-level histogram of segmented ROI of the carotid image—for 32 same measurements, bins were computed |
| Plaque histogram represents plaque characterization | ||
| Multiregion histogram—to check whether plaque outer region signifies disease progression | ||
| Grayscale median (GSM) derived from the histograms first-order statistics, and entropy represents echogenicity | ||
| Histogram of oriented gradient (HOG)—gradient magnitude and orientation | ||
| Correlogram—statistics and spatial distribution of the features | ||
| Texture and shape features—normalized; histogram and correlogram features—used without normalization | ||
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| 4 | Morphology features (15) | Mean probability density functions (PDFs), mean cumulative distribution functions (CDFs) |
| Plaque power spectra for all the three intensity variations (low, medium, and high) | ||
| Shape, connectivity, and convexity | ||
| Plaque size, lipid core, and presence of intraplaque hemorrhage | ||
| Smooth lumen surface—no risk; rough lumen—leads to stroke | ||
| Plaque volume | ||
Figure 4Feature analysis.
List of selected significant features.
| Sl. no | Selected features | Description |
|---|---|---|
| 1 | Texture | Spatial arrangement of image intensity |
| 2 | Spatial structure | Exploit location information |
| 3 | Skewness | Extent to which a distribution differs from a normal distribution |
| 4 | Kurtosis | Pixel intensity distribution |
| 5 | Histogram | Pixel distribution as a function of tonal variation |
| 6 | Correlogram | Spatial correlation of intensity changes with distance |
| 7 | HOG | Count incidences of gradient alignment in localized regions of an image |
| 8 | Gabor wavelet | Frequency-wise intensity variation check in specific direction |
| 9 | Angular 2nd moment | Textural uniformity in image |
| 10 | Shape | Shape characteristics |
| 11 | Sharpness | Degree of clarity in both coarse and fine image detail |
| 12 | Length irregularity | Irregularities of the length of structures in an image |
| 13 | Mean probability density function | Probability that the region brightness is less than or equal to a specified brightness value |
| 14 | Grayscale median | Median of grayscale intensities |
| 15 | Multiregion histogram | Checks whether plaque outer region signifies disease progression |
| 16 | Arterial wall ROI's randomness | Randomness present in the artery wall |
| 17 | Absolute gradient | Directional change in intensity |
| 18 | Angular and radial sum of discrete Fourier transform for Fourier power spectrum | Fourier power spectrum's Fourier transform |
| 19 | Coarseness | Type of texture feature |
| 20 | Convexity | Convex curves present in an image |
| 21 | Connectivity | Connectivity among pixels |
| 22 | Plaque volume | Plaque volume measure |
Figure 5ROC curve and gain chart of Naive Bayes algorithm.
Figure 6Box-Cox plot of plaque diameter.
Figure 7Pure ordinal curve.
Confusion matrix of the ML algorithms.
| Naive Bayes | DLVQ | |||
|---|---|---|---|---|
| Actual positive (1) | Actual negative (0) | Actual positive (1) | Actual negative (0) | |
| Predicted positive (1) | 121 | 24 | 132 | 3 |
| Predicted negative (0) | 38 | 178 | 27 | 199 |
Performance comparison of classification of carotid artery ultrasound images using ML approaches.
| Algorithm | Accuracy | Specificity | Sensitivity | Precision | F score | AUC |
|---|---|---|---|---|---|---|
| Naive Bayes | 82.82 | 88.11 | 76.1 | 83.44 | 79.60 | 85.77 |
| DLVQ | 91.68 | 98.51 | 83.01 | 97.77 | 89.78 | 98.14 |
DLVQ has recorded improved performance in terms of AUC, F score, precision, sensitivity, specificity, and accuracy compared with the Naive Bayes algorithm.
Comparison of DLVQ performance with all extracted and selected features.
| Accuracy | With all extracted features | With selected features |
|---|---|---|
| Naive Bayes | 80.91 | 82.82 |
| DLVQ | 88.72 | 91.68 |