Literature DB >> 35601480

Unsupervised Domain Adaptation for Small Bowel Segmentation using Disentangled Representation.

Seung Yeon Shin1, Sungwon Lee1, Ronald M Summers1.   

Abstract

We present a novel unsupervised domain adaptation method for small bowel segmentation based on feature disentanglement. To make the domain adaptation more controllable, we disentangle intensity and non-intensity features within a unique two-stream auto-encoding architecture, and selectively adapt the non-intensity features that are believed to be more transferable across domains. The segmentation prediction is performed by aggregating the disentangled features. We evaluated our method using intravenous contrast-enhanced abdominal CT scans with and without oral contrast, which are used as source and target domains, respectively. The proposed method showed clear improvements in terms of three different metrics compared to other domain adaptation methods that are without the feature disentanglement. The method brings small bowel segmentation closer to clinical application.

Entities:  

Keywords:  Abdominal computed tomography; Feature disentanglement; Small bowel segmentation; Unsupervised domain adaptation

Year:  2021        PMID: 35601480      PMCID: PMC9115845          DOI: 10.1007/978-3-030-87199-4_27

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  8 in total

1.  3D Slicer as an image computing platform for the Quantitative Imaging Network.

Authors:  Andriy Fedorov; Reinhard Beichel; Jayashree Kalpathy-Cramer; Julien Finet; Jean-Christophe Fillion-Robin; Sonia Pujol; Christian Bauer; Dominique Jennings; Fiona Fennessy; Milan Sonka; John Buatti; Stephen Aylward; James V Miller; Steve Pieper; Ron Kikinis
Journal:  Magn Reson Imaging       Date:  2012-07-06       Impact factor: 2.546

2.  Unified cross-modality feature disentangler for unsupervised multi-domain MRI abdomen organs segmentation.

Authors:  Jue Jiang; Harini Veeraraghavan
Journal:  Med Image Comput Comput Assist Interv       Date:  2020-09-29

3.  Mesenteric vasculature-guided small bowel segmentation on 3-D CT.

Authors:  Weidong Zhang; Jiamin Liu; Jianhua Yao; Adeline Louie; Tan B Nguyen; Stephen Wank; Wieslaw L Nowinski; Ronald M Summers
Journal:  IEEE Trans Med Imaging       Date:  2013-06-27       Impact factor: 10.048

Review 4.  Imaging the small bowel.

Authors:  Kevin P Murphy; Patrick D McLaughlin; Owen J O'Connor; Michael M Maher
Journal:  Curr Opin Gastroenterol       Date:  2014-03       Impact factor: 3.287

5.  CT-based multi-organ segmentation using a 3D self-attention U-net network for pancreatic radiotherapy.

Authors:  Yingzi Liu; Yang Lei; Yabo Fu; Tonghe Wang; Xiangyang Tang; Xiaojun Jiang; Walter J Curran; Tian Liu; Pretesh Patel; Xiaofeng Yang
Journal:  Med Phys       Date:  2020-08-02       Impact factor: 4.071

6.  Automatic segmentation of pelvic organs-at-risk using a fusion network model based on limited training samples.

Authors:  Zhongjian Ju; Qingnan Wu; Wei Yang; Shanshan Gu; Wen Guo; Jinyuan Wang; Ruigang Ge; Hong Quan; Jie Liu; Baolin Qu
Journal:  Acta Oncol       Date:  2020-06-22       Impact factor: 4.089

7.  Deep Small Bowel Segmentation with Cylindrical Topological Constraints.

Authors:  Seung Yeon Shin; Sungwon Lee; Daniel Elton; James L Gulley; Ronald M Summers
Journal:  Med Image Comput Comput Assist Interv       Date:  2020-09-29

8.  Auto-segmentations by convolutional neural network in cervical and anorectal cancer with clinical structure sets as the ground truth.

Authors:  Hanna Sartor; David Minarik; Olof Enqvist; Johannes Ulén; Anders Wittrup; Maria Bjurberg; Elin Trägårdh
Journal:  Clin Transl Radiat Oncol       Date:  2020-09-14
  8 in total

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