Sunil Kumar1, Aathira Sujathan Nair1, Mohamed A Abdelgawad2, Bijo Mathew1. 1. Department of Pharmaceutical Chemistry, Amrita School of Pharmacy, Amrita Vishwa Vidyapeetham, AIMS Health Sciences Campus, Kochi 682 041, India. 2. Department of Pharmaceutical Chemistry, College of Pharmacy, Jouf University, Sakaka, Al Jouf 72341, Saudi Arabia.
Abstract
Monoamine oxidase (MAO) is a protein with a key function in the catabolism of neuroamines in both central and peripheral parts of the body. MAO-A and -B are two isozymes of this enzyme which have emerged to be considered as a drug target for the treatment of neurodenerative disorders such as Alzheimer's disease (AD) and Parkinson's disease (PD). Isatin is an endogenous small fragment, reversible inhibitor for MAO enzymes and is more selective for MAO-B than -A. Isatin is responsible for increasing the dopamine level in the brain by the inhibition of an MAO enzyme. The very few selective and reversible inhibitors existing for MAO proteins and the intensity of neurological diseases in humanity have opened a new door for researchers. Isatin has a polypharmacological profile in medicinal chemistry, is a reversible inhibitor for both the MAOs, and shows high selectivity potent inhibition for MAO-B. In this review, we discuss isatins and their analogues phthalide and phthalimide with structure-activity relationships (SARs), and this comprehensive information accelerates the ideas for design and development of a new class of MAO inhibitors for neurodegenerative diseases.
Monoamine oxidase (MAO) is a protein with a key function in the catabolism of neuroamines in both central and peripheral parts of the body. MAO-A and -B are two isozymes of this enzyme which have emerged to be considered as a drug target for the treatment of neurodenerative disorders such as Alzheimer's disease (AD) and Parkinson's disease (PD). Isatin is an endogenous small fragment, reversible inhibitor for MAO enzymes and is more selective for MAO-B than -A. Isatin is responsible for increasing the dopamine level in the brain by the inhibition of an MAO enzyme. The very few selective and reversible inhibitors existing for MAO proteins and the intensity of neurological diseases in humanity have opened a new door for researchers. Isatin has a polypharmacological profile in medicinal chemistry, is a reversible inhibitor for both the MAOs, and shows high selectivity potent inhibition for MAO-B. In this review, we discuss isatins and their analogues phthalide and phthalimide with structure-activity relationships (SARs), and this comprehensive information accelerates the ideas for design and development of a new class of MAO inhibitors for neurodegenerative diseases.
Isatin (2,3-dioxindole) is a pharmacologically
active agent, which
is derived from the indole (Figure ) nucleus, and it was discovered in 1841 by Erdman
and Laurent.[1,2] However, isatin is an endogenous
small molecule in humans, which is widely distributed in the body
fluid and different tissues of mammals and also naturally originates
in the plants of the genus Isatis and in Boronia koniamboensis (New Caledonia), Melochia
tomentosa (United States, Mexico), and Couropita
guianancis aubl (Central America and Amazon region) species.[3−7] The Stolle, Gassman, Martinet, and Sandmeyer procedures were used
to synthesize various isatin analogues by the conventional methods.[8−11] Isatin is a highly reactive chemical that has been used as a nucleophile
and an electrophile in synthetic chemistry. Nucleophilic additions
to the third position keto group are the most well-known reaction
of isatin as an electrophile. Spiro compounds have now been discovered
to have significant pharmacological action, particularly in the science
of organic products. Several investigations on the synthesis of spiro
analogues of isatin at the C-3 position have been published. Meshram
and colleagues[12] described the synthesis
of isatin derivatives containing the spiroxindole component via a
three-component reaction comprising isatin, amino acids, and but-2-ynedioates
in an aqueous medium employing microwave irradiation with base- and
catalyst-free conditions. As a nucleophile, the reaction undergoes
substitution at γ-lactam nitrogen and electrophilic substitution
on the aromatic ring. Besides, derivatives of isatin have shown certain
chemical reaction like ring expansion, oxidation, aldol condensation,
and Friedel–Crafts reaction[12−14] (Figure ). Isatin is an attractive oxidized indole
nucleus and has received much attention as a framework in the design
of numerous molecules established as inhibitors of anticonvulsants,
apoptosis, anxiolytics, and antifungal, antimalarial, potential antitumor,
antibacterial, antitubercular, and antiviral agents.[15−24] Many drugs have recently been reported for the treatment of renal
cell carcinoma and imatinib-resistant gastrointestinal stromal tumors
like Sunitinib.[25−27]
Figure 1
Structure of isatins and their reactions.
Structure of isatins and their reactions.Glover et al., Clow et al., and Armando et al. found that
tribulin,
an endogenous displacer benzodiazepine and monoamine oxidase inhibitor
(MAO), has been detected in humans and rats (brain and heart).[28−31] The chemical composition of tribulin was unclear until Glower and
colleagues discovered that isatin had features that are similar to
endogenous tribulin.[32] Isatin is identified
as a potent inhibitor for MAO, and its selectivity to MAO-B is more
than that to MAO-A.[33,34]MAOs are imperative enzymes
that have been usually investigated
for the treatment of neurological diseases such as Parkinson’s
disease (PD) and Alzheimer’s disease (AD). The oxidative deamination
of biogenic and xenobiotic amines is catalyzed by this enzyme, which
changes their levels in the brain. Flavin-containing amine oxidoreductase
is a protein family that catalyzes the breakdown of neurotransmitters.
Two different types of MAOs, namely, MAO-A and MAO-B, both share ∼70%
sequence similarity and are found to originate in the CNS in humans,
and both contain the cofactor flavin adenine dinucleotide (FAD).[35−39] These enzymes break down the neuroamines, such as serotonin (5-HT),
dopamine (DA), adrenaline, noradrenaline (NA), and phenylethylamine
(PEA). MAO-A selectively deaminates 5-HT and norepinephrine (NE),
and clorgyline inhibits it irreversibly. Selegiline, on the other
hand, inhibits MAO-B, which selectively deaminates benzylamine and
phenylethylamine (PEA) in an irreversible manner. The newest marketed
FDA-approved drug safinamide and lazabemide (nonmarketed) (Figure ) are reversible
selective MAO-B inhibitors.[40,41] Moreover, the isatin
small molecule is identified as a reversible MAO enzyme. The PDB IDs 1OJA and 2XFP are two protein
3D structures in MAO-B with the isatin complex.[42,43] Apart from these, the crystal structure of 2XFP reveals that two
fragments, compound 36 (2-BFI) and isatin, respectively,
block the entrance and substrate-binding cavities. In the isatin complex,
hydrophobic contacts were seen in Ile199, Ile198, and Leu171 as well
as a hydrogen connection with the cofactor FAD via the water molecule.
Two carbonyl groups compose a hydrophobic environment with Tyr326,
Phe343, Leu171, and Tyr60.[44] Isatins have
been used for PD treatment as a MAO-B inhibitor in the last two decades.
Isatin is able to increase the dopamine level in striatum by inhibiting
MAO-B. Previously, MAO-related quinozoline,[45] chalcone,[46,47] coumarin,[41] and pyrazoline[48] and the key
role of halogen bonds have been established in previous reviews, but
even though isatin is an established MAO inhibitor no reviews on an
indole-based nucleus (isatin) have been established. Thus, we concentrate
on this scaffold of an indole-based nucleus, and we have tried to
explain the SAR study of isatin, phthalide, and phthalimide-based
analogues.
Figure 2
Structure of MAO inhibitors.
Structure of MAO inhibitors.Few isatin analogues were investigated by Medvedev et al.,[49] in vitro for their MAO-B and MAO-A inhibitory
activity, and the majority of the analogues was found to be less effective
than isatin. Substitutions on the fifth, sixth, and seventh positions
of the aromatic ring of isatin seemed to increase its MAO inhibitory
activity. The OH group in the fifth, sixth, and seventh positions
showed increased activity when compared to methyl-substituted compounds.
Isatinic acid which is obtained through the hydrolysis of isatin showed
the highest activity. In comparison, hydroxylation of the aromatic
ring’s fifth position showed higher selectivity for MAO-A than
-B.Structurally similar compounds of isatin were also taken
into consideration,
and it was found that these analogues also seemed to show potent MAO
inhibitory activity. Medvedev et al.[49] reported
that apart from isatin structurally similar compounds like oxindole
(1), indole (2), and dopamine-isatin (4) (Figure ) were also evaluated. The IC50 value of N-methyl isatin (5) was 7.9 ± 0.4 μM, and
the IC50 value of analogues of isatin and the hydroxylated
form of isatin molecules was 14 ± 3 μM. Surprisingly, from
the evaluation, we can clearly understand that 5-hydroxyisatin (6) showed the highest bioactivity against the MAO-A enzyme
with an IC50 value of 8.4 ± 1.4 μM, followed
by unsubstituted isatin and the further remaining compounds.
Figure 3
Structure of
an indole-based nucleus (isatin derivative).
Structure of
an indole-based nucleus (isatin derivative).From the above provided data, it is very clear that the introduction
of an oxo group to the indole ring shows enhanced inhibitory potential
toward MAO-B and not much toward MAO-A. Among the indole compound
substituted with an oxo group in the second and third positions, the
3-oxo group containing an indole compound was shown to have the highest
inhibitory potency when compared to that of the 2-oxo group containing
an indole compound which may be due to the unreactiveness of the 2-oxo
group, and the 3-oxo group forms a Schiff base with a free amino group
of the MAO compound.[49]There are
numerous compounds that have features similar to that
of isatin structurally, such as indole (2), oxindole
(1), and much more. The more detailed our analysis, the
more we are able to explore the structural features of isatin analogues.
Michelle et al. suggested that they have screened four compounds similar
to isatin and 5-hydroxyisatin (6) and compared them with
each other.[50]From the IC50 values obtained, the compounds 5-hydroxyindole
(3) showed more selectivity toward the MAO-A enzyme than
MAO-B. Among the four analogues, we can see that the substitution
of the OH group in the fifth position of the oxindole increased the
selectivity toward MAO-A, whereas substitution of the OH group in
the fifth position of isatin showed reduced selectivity toward MAO-A.In the previously conducted studies, we can see that isatin was
3 times more effective toward MAO-B, while the 5-hydroxyisatin (6) which is the synthetic analogue of isatin was 3 times more
effective toward MAO-A than MAO-B. Interestingly, while investigating
the concentration of each compound in the brain, it became evident
that the concentration of 5-hydroxyoxindole (3) is 2
times higher. While comparing the two synthetic analogues of oxindole
(1) and isatin, it shows that 5-hydroxyoxindole (3) is a 23 times more effective inhibitor of MAO-A with an
IC50 value of (8.4 ± 1.4 × 10–6 μM) than 5-hydroxyisatin with an IC50 value of
6.5 ± 1.1 μM. Overall, this SAR study concludes that a
hydroxy group at the fifth position of isatin increases the selectivity
toward the MAO-A. Additionally, C-3 and N-1 positions on the oxo and
methyl group, respectively, increase affinity toward MAO-B (Figure ).
Figure 4
Structure–activity
relationship of isatin derivatives.
Structure–activity
relationship of isatin derivatives.Isatin, an indoledione ring with a molecular weight of 147.13,
has some intermediates that are called conjugated isatin anions, as
reported by Berci-Filho et al.,[100] and
it is very clearly understood that anions, because of their weakly
bonded valence electrons, produce strong van der Waals interactions
with the molecules surrounding them when compared to that of neutral
molecules. In a study, Surendra et al.[101] explain the need for a coplanar structure of substituents at C-2
and C-3 for the selectivity toward MAO-A inhibition.According
to molecular docking studies with MAO-B, the capacity
of the (E)-styrylisatin derivatives to connect the
enzyme’s substrate cavity and the entrance cavity is the best
explanation for the binding affinity of the (E)-styrylisatin
derivatives in comparison to isatin. The worst binding of the derivatives
to human MAO-B is supported by testing using the Ile199 Ala mutant.[51]A group of ten C5- and C6-substituted
isatin derivatives (Figure ) were synthesized
in a work by Manley-King et al.[51,52] with the goal of determining
their MAO inhibitory characteristics. This is based on the literature,
which claims that reacting C3-substituted aniline derivatives with
diethyl ketomalonate produces isatins with substitution in the C6
position. According to the selectivity index, isatin is 1.57 times
more highly selective toward MAO-B than MAO-A. The result that molecule 7 is an effective inhibitor of MAO-B with IC50 values
of 0.009 μM was consistent with previous findings. The fact
that the 4-phenylbutyl group is the longest side string studied in
this review supports the notion that a longer side string improve
isatin’s MAO-B inhibitory efficacy more than shorter side chains.
The 4-phenylbutyl side string had no effect on isatin’s MAO-A
inhibition potency, in contrast to its effect on MAO-B inhibition
activity. Compound 8 with an IC50 value of
2.19 μM only weakly inhibited MAO-A and was roughly 14 times
more powerful than isatin’s MAO-A inhibitory strength. Likewise,
the isatin derivatives that are substituted at C6 and C5 with the
benzyloxy group were found to be efficient MAO-B inhibitors, with
IC50 values of 0.138 μM and 0.103 μM, respectively.
Compounds 9 and 10 were poorer MAO-B inhibitors
in comparison with the benzyloxy-substituted isatin counterparts,
with IC50 values of 9.93 μM and 1.40 μM, respectively.
Compound 10 was 13 times less powerful than the equivalent
isatin analogues which are C5-benzyloxy substituted, while compound 9 was 71 times less powerful than the corresponding isatin
analogue with C6-benzyloxy substitution.
Figure 5
Structure of styryl-based
isatin derivatives.
Structure of styryl-based
isatin derivatives.As a result, we can state
that the substitution of isatin at the
C-5 position is preferable when compared to C-6 substitution for increasing
isatin’s MAO inhibitory potencies. The fact that C-6 and C-5
substitution significantly improves isatin’s MAO-B inhibition
effectiveness is consistent with the theory that the C-6 and C-5 side
chains connect with the enzyme’s entrance cavity residues,
which allows for more valuable interactions with the protein and thus
more effective inhibition when compared to isatin.[51]C-6- and C-5-substituted isatin derivatives (Figure a) are reversible
inhibitors of hMAO-A and
-B, according to the literature. Compared to isatin, C-6 and C-5 substitutions
increase binding affinity to both MAO isoforms and, in most cases,
preferential selectivity toward MAO-B isozymes. The isatin ring binds
to the substrate cavities of MAO-A and MAO-B, according to modeling
and crystallographic studies, and is stabilized by hydrogen bond connections
between the C-2 carbonyl oxo and the NH of the dioxo indolyl scaffold
and water compounds existing in the substrate cavities of MAO-B and
MAO-A. The only isatin derivatives tested in this work that inhibited
MAO-A potently were compound 29, with IC50 values of 0.233 and 0.562 μM, respectively. With IC50 values of 1.40 and 9.93 M, respectively, compounds 24 and 25 were mild MAO-B inhibitors compared to the benzyloxy
replacement isatin derivatives (11, 12).
Molecules 13 were about 13 times less powerful than the
equivalent C-5 benzyloxy substituted isatin derivatives (11), while 14 were about 71 times less effective than
the corresponding compound 12. Similar to the benzyloxy-substituted
counterparts, compounds 15, 16, 17, and 18 were shown to be substantially poorer MAO-B
inhibitors (11, 12). As a result, the phenyl,
2-phenylethyl, and phenoxy side strings do not boost the MAO-B binding
attraction of isatin in the same way as the benzyloxy and (E)-styryl side strings. Compound 19 inhibited
MAO-A only modestly, with an IC50 value of 2.19 μM,
almost 14 times more powerful than isatin at inhibiting MAO-A. In
order to support their findings, they carried out molecular docking
and molecular modeling studies for compounds 11. In contradiction
to the interaction positions of isatin and 11 in the
human MAO-B active site, the dioxoindolyl ring of 11 in
the MAO-A active site is rotated through 180°. With an interplane
distance of roughly 3.6 Å3, the dioxoindolyl ring
of 11 may form a pi–pi contact with the amide
functional group of the Gln-215 side chain (Figure b). The isatin ring generates one extra hydrogen
bond contact with the active site residues and fluids of MAO-A and
-B compared to the aniline counterparts, according to molecular docking
studies. This might explain why the isatin analogues have higher MAO
inhibitory potencies than the comparable aniline counterparts. Possible
pi–pi stacking interactions between the isatin ring and the
amide p-face of an active site Gln residue may also help to stabilize
the complexes between the isatin analogues and the MAO isozymes. Gln-215
forms stacking contacts with isatin 11 in MAO-A, whereas
Gln-206 forms stacking interactions with 11 in MAO-B.[52]
Figure 6
(a) Structures of benzyloxy- and benzal-based isatin derivatives.
(b) Compound 11 with MAO-B interaction.
(a) Structures of benzyloxy- and benzal-based isatin derivatives.
(b) Compound 11 with MAO-B interaction.This SAR study concludes that, as shown in Figure , the C-5 position of isatin
in halogen substitution
on benzyloxy increases the benzal chain and the affinity toward MAO-B.
The C-6 position in benzyloxy increases the selectivity for MAO-B,
and the phenyl substitution increases MAO-A inhibition.
Figure 7
Structure–activity
relationship for benzyloxy- and benzal-based
isatin derivatives.
Structure–activity
relationship for benzyloxy- and benzal-based
isatin derivatives.Based on these findings,
as well as the structural similarities
between phthalimide (isomer of isatin) and isatin, a range of phthalimide
derivatives (Figure ) have been created and tested as MAO inhibitors by Clarina et al.
[2011]. Here, in this work, a group of C-5-substituted phthalimide
compounds 21–31 were synthesized
and tested for their inhibition of recombinant hMAO-B and -A. The
findings showed that the compounds are extremely effective hMAO-B
inhibitors with good reversibility with IC50 values in
the lower nanomolar range for the majority of them. The SAR study
showed that lengthening of the C-5 substituent improves the phthalimide
analogues’ MAO-B inhibitory potency. Halogen replacement on
the ring system of the C-5 side strand can boost the efficacy of MAO-B
inhibitors, especially the weaker phthalimide inhibitors.
Figure 8
Structure of
phthalimide-based derivative.
Structure of
phthalimide-based derivative.Because N-substituted phthalimides (30 and 31) are poor MAO-B inhibitors, the location of the substituent at C-5
is structurally significant. The examination that phthalimide is indeed
a poor MAO-B blocker adds to the evidence that the C-5 substituent
is important for affinity to MAO-B. Modeling studies show that high
affinity binding requires polar attractions between the polar area
of the MAO-B substrate cavity and the phthalimide ring, as well as
van der Waals forces between the entry cavity and the C-5 side string.
The observation that halogen replacement on the aromatic ring of the
C-5 side string boosts MAO-B inhibitor effectiveness supports the
notion that interactions between the entry cavity and the C-5 side
string are crucial for inhibitor binding. As a result of these structural
modifications, the C-5 side string and the entry cavity are anticipated
to have more successful van der Waals interactions. Because van der
Waals attractions within the entry cavity most likely stabilize the
phenyl ring of the C-5 side chain, halogen replacement on the phenyl
ring (25–27) is bound to improve
the inhibitor’s meaningful interactions with the MAO-B entry
gate cavity via hydrophobic discretion and dipole connections.The C-5 substitution of phthalimide derivatives 21–29 inhibited MAO-A in a reversible manner. The
phthalimide derivatives are MAO-B-selective inhibitors, except from
5-phenoxyphthalimide (21), which is seen to be nonselective.
An increase in the MAO-A inhibitory activity takes place by the lengthening
of the C-5 side chain, and the halogen substitution on the benzene
ring of the C-5 side string increased the MAO-A inhibitory bioactivities
of the phthalimide derivatives, but to a smaller amount than MAO-B.
These findings imply that the C5 side chain interacts with the MAO-A
active site in a productive manner. The fact that phthalimide is just
a poor MAO-A inhibitor highlights the significance of the C-5 side
string in MAO-A binding. As a result, although a substituent at the
C5 position is essential for MAO-B inhibition, a substituent at the
C5 position is necessary for pthalimide’s MAO-A inhibitory
action. Finally, C-5-substituted phthalimides have high MAO-B binding
attractions, making them good candidates for developing novel selective
reversible MAO-B inhibitors. Furthermore, analogues like compound 26, which also have powerful MAO-A inhibitory properties,
might be used as lead molecules in the development of nonselective
reversible MAO-A and -B inhibitors. The results of C5-substituted
phthalimide analogues 21–29 inhibiting
hMAO-A and -B were revealed through the molecular modeling reports.
It was detected that the C-5 substituent is crucial for the phthalimides’
MAO-B and MAO-A inhibiting activities. This is exhibited by the fact
that N-substituted phthalimides and phthalimide (30 and 31) are poor MAO-B and MAO-A inhibitors that do not bind to
the proteins in some situations, even at large doses. It was also
noteworthy that among the phthalimides examined the phenylpropenyloxy-substituted
derivative 28 showed the lowest MAO-A inhibitory bioactivity
while having a high MAO-B inhibitory activity. The molecular docking
experiments were conducted using the Discovery Studio 1.7 modeling
program, following a technique previously published. Despite this,
the MAO-A active site has numerous polar functional groups that are
within the hydrogen bond contact distance with compound 28. The oxo group at C-1 of the phthalimide ring may cause hydrogen
interaction with an active site water compound, whereas the phthalimide
NH proton may form hydrogen interaction with the phenolic hydrogen
of Tyr444 and a water compound at C-1 of the phthalimide ring (HOH-739
and HOH-710). The extension of the C5 substituent by its length or
size enhances the inhibitory potencies of the phthalimide analogues,
which is clearly understood from the structure–activity relationship.
Halogen replacement on the ring system of the C-5 side strand improves
the efficiency of MAO-B inhibitors, especially for the weaker phthalimide
inhibitors. Because N-substituted phthalimides are poor MAO-B inhibitors,
the substitution at C-5 has structural significance. The fact that
phthalimide is a poor MAO-B blocker provides more proof for the relevance
of the C-5 substituent for interacting with MAO-B. Finally, C-5-substituted
phthalimides have high MAO-B binding energies and are thus appropriate
lead molecules for the expansion of new reversible selective MAO-B
inhibitors. Furthermore, analogues like 25, which also
have substantial MAO-A inhibition capabilities, might be used as lead
molecules in the development of reversible nonselective MAO-A and
-B inhibitors.MAO inhibitors have been designed using a wide
range of heterocyclic
moieties. Isatin is a natural blocker of MAO-B and -A. Phthalimide,
an isatin isomer, has now been classified as a possible scaffold for
MAO-B-selective inhibitor development. Though phthalimide is a mild
MAO inhibitor, C-5 substitution results in compounds that are very
selective and effective MAO-B inhibitors. N-Substitution, on the other
hand, results in molecules that are largely deprived of MAO inhibitory
characteristics. By substituting on the C-8 locations of caffeine
and the C-5 and C-6 locations of isatin, the MAO-B inhibitory profile
of both can be improved. In this reference, the benzyloxy substituent
appears to be particularly beneficial, and benzyloxy substitution
of caffeine, isatin, and caffeine phthalimide yields compounds like 32, 33, and 34 (Figure ) which are many times more
effective MAO-B inhibitors than the core molecules.
Figure 9
Reference molecules for
MAO study.
Reference molecules for
MAO study.With an interplane length of roughly
3.4, a putative pi–pi
contact between the amide group of the amino acid Gln215 and phthalimide
rings may also exist. The C5 side chain of compound 28 is bent at a 50 ° angle from the caffeinyl ring plane, resulting
in a bent conformation. In this SAR study (Figure ), benzoyloxy and the bridge of benzoyloxy
is a key role for MAO inhibition, and halogen substitution also affects
the affinity. The N-position of phthalimide on substitution does not
increase the MAO-B inhibition much.
Figure 10
Structure–activity relationship
for phthalimide-based derivatives.
Structure–activity relationship
for phthalimide-based derivatives.Van der Walt et al.[55] explained the
binding of isatin analogues, based on which they further investigated
(E)-styrylisatin analogues for their MAO inhibitory
activity. According to the 3D architecture of a hybrid between isatin
and hMAO-B, isatin interacts with the substrate cavity via C-2 carbonyl
oxo and dioxindolyl NH hydrogen linked to ordered water compounds
in the active site. The MAO-B entry cavity is left empty as a result
of this binding approach. According to these structural criteria,
styryl replacement at C-5 results in molecules that span both cavities,
with the isatin scaffold in the substrate cavity and the C-5 styryl
replacement reaching into the entry cavity. The C-6 location of isatin,
in contrast to C-5, points to the bottom of the substrate cavity.
According to the crystal structure of human MAO-B, extending a C-6
styryl side string into the entry cavity is only conceivable if the
isatin scaffold uses an altered binding more than isatin. Analogues 7 and 7a were synthesized and subjected to evaluation
of MAO inhibitory activity. From the biological evaluation, we can
very clearly see that compounds 7 and 7a showed approximately 200- and 19-fold more potency toward MAO-B
with IC50 values of 41.7 nM and 444 nM, respectively. Apart
from the above study, they had also performed a computational study
where the higher binding affinity of the (E)-styrylisatin
derivatives in contrast to isatin is best clarified by the capacity
of the styryl isatins to bridge both the enzyme’s substrate
cavity and entry cavity, according to molecular docking experiments
with MAO-B. The analogues’ weaker binding to the hMAO-B Ile199
Ala mutant gives experimental support for this theory. In contrast
to compound 35 (CSC) (Figure ), changes in the comparative geometries
of the aromatic rings for MAO-B and MAO-A explain the lower selectivity
of (E)-styrylisatin derivatives between MAO-B and-A.With an enzyme–inhibitor design of MAO inhibitors, it was
shown that the endogenous chemically synthesized isatin is a moderately
powerful inhibitor of human MAO-B. With the KI value of the 3 μM
dissociation constant with a KI value of 15 μM, isatin also
inhibits human MAO-A. According to the 3-D structure of a complex
between hMAO-B and isatin, within the substrate cavity, isatin interacts
with the C-2 carbonyl oxygen and dioxoindolyl NH hydrogen linked to
ordered water compounds in the active site. The entry cavity of MAO-B
is left empty by this binding method. Isatin’s structure when
linked to MAO-A has yet to be identified. Caffeine, a tiny molecule
with a KI value of 3.6 μM, is a mild inhibitor of MAO-B. Caffeine’s
inhibitory efficacy is significantly boosted when the caffeinyl ring
is substituted with a styryl side string at C-8. Molecular docking
experiments of compounds 7 and 7a in the
active site of MAO-B were undertaken to give additional insights.
The crystallographic structure of the complex between hMAO-B and the
reversible inhibitor safinamide was chosen for this purpose (2V5Z). The docking computations
were carried out with Discovery Studio 1.7’s Ligand Fit program,
following a previously published technique. The best docking solution
was discovered. As a result, analogues of compounds 7 and 7a have been recognized as possible new probes
for MAO-B and MAO-A binding sites. The outcomes suggest the concept
that small compound inhibitors of these flavoenzymes could boost their
inhibitory potencies by exchanging side strings that enable interaction
to both the entry and substrate cavities of MAO-B. MAO-Ile-199 B’s
“gate” side string appears to be significant in identifying
reversible blockers, potentially through linking with the styryl side
strings of molecules 7–7c, as well
as other aspects that will need extra structural data to discover.
In contrast to the results with compound 35, the startling
discovery that (E)-styrylisatins are also competitive
inhibitors of MAO-A reveals that relative geometries are key considerations
in MAO inhibitor design.[55]Figure a concludes that the C-6 position
on styryl substitution decreases MAO-B inhibition, and the C-5 position
on halogen-substituted styryl increases MAO-B potency. The C-5 position
on halogen styryl increases MAO inhibition, and C-6 substitution is
more selective for MAO-B.
Figure 11
(a) Structure–activity relationship
for C-5 and C-6 styryl-based
isatin derivatives. (b) Compound 7 with MAO-B interactions.
(a) Structure–activity relationship
for C-5 and C-6 styryl-based
isatin derivatives. (b) Compound 7 with MAO-B interactions.When paired with indirectly acting sympathomimetic
amines like
tyramine, which is found in some foods, MAO-A inhibition has the potential
to cause cardiovascular consequences. The amount of tyramine that
reaches the systemic circulation is reduced because tyramine is normally
metabolized by MAO-A in the gut wall. An irreversible suppression
of MAO-A impairs normal tyramine metabolism in the stomach, resulting
in higher amounts of tyramine in the bloodstream.[51] Reversible blockers, on the other hand, have no effect
since the inhibitor is quickly replaced by tyramine, which is then
properly metabolized by MAO-A. These findings indicate that selective
MAO-A inhibitors or MAO-A/B combination inhibitors should interact
with MAO-A in a reversible manner. An additional benefit of reversible
inhibition is that if the medicine is removed from the tissues enzyme
activity quickly returns. Because the turnover rate for MAO biosynthesis
in the human brain can be as high as 40 days, recovery of enzyme function
after discontinuing irreversible MAO inhibitor medication could take
several weeks.[52] As a result, various investigations
are underway to find novel MAO inhibitors that attach to the enzymes
in a reversible manner. Isatin is an illustration of a reversible
MAO-A/B combination inhibitor. Isatin is an endogenous type of molecule
which suppresses human MAO-A and -B. Its enzyme–inhibitor Ki values for the two enzymes are 15 and 3 M,
respectively. Although the X-ray crystal structure of isatin in complex
with MAO-A has been discovered, the 3D structure of isatin within
the binding center of hMAO-B remains unknown. The MAO-B substrate
cavity to isatin is bound, according to the structural model, with
the C-2 carbonyl group of the dioxo indolyl scaffold oriented toward
the FAD cofactor. Isatin’s NH and C-2 carbonyl oxygen are stabilized
by hydrogen bonding to water molecules in the MAO-B substrate cavity.
The fact that isatin discovered in the MAO-B substrate cavity leaves
the enzyme’s entrance cavity empty is remarkable. C-6 and C-5
isatin compounds were previously investigated as possible hMAO-A and
-B blockers based on this discovery and modeling studies. To gain
a better understanding of the problem, small molecules of 7 and 7b in the active site of MAO-A were investigated
using LigandFit, as previously reported. The crystallographic structure
of human recombinant MAOA in association with the reversible inhibitor
harmine was chosen for this purpose (2Z5X). The dioxoindolyl rings of 7 and 7b are docked near the FAD (Figure b), with the styryl side chains extending
toward the active site cavity opening in the top-ranked docking solutions.
These binding modes are analogous to the MAO-B binding modes. The
dioxoindolyl ring of 7a, which is rotated 180° in
comparison to that of 7, is also equivalent to the docking
findings achieved using MAO-B.[55]5-Sulfanylphthalimides were discovered to be effective and selective
MAO-B inhibitors by Van der Walt et al.[56] The benzylsulfanyl side string is especially well suited for enhancing
phthalimide’s MAO-B inhibiting activity in this way. Compound 37 (Figure ) (IC50= 0.0045 M) has a 30 000 times higher potency
than phthalimide (IC50= 134 M). This example demonstrates
the significant of the C-5 side string for MAO-B inhibitory activity.
According to this study, 5-sulfanylphthalimides are feasible lead
molecules for the development of antiparkinsonian drugs due to their
MAO-B inhibitory effectiveness and suitable selectivity profiles.
It is worth mentioning that 5-sulfanylphthalimides with significant
MAO-B inhibitory characteristics can be created with a number of C-5
substituents from a design standpoint. This means that modifying the
C-5 side string to develop the compound’s properties is less
likely to decrease MAO-B inhibition strength.[56]
Figure 12
Structure of a potent molecule of phthalimide derivative 37.
Structure of a potent molecule of phthalimide derivative 37.In SAR, this study concludes the
sulfanyl chain increases MAO-A
as well as MAO-B potency (Figure ). Halogen-substituted benzylsulfinyl increases MAO-B
inhibition.
Figure 13
Structure–activity relationship for benzylsulfinyl-based
phthalimide derivatives.
Structure–activity relationship for benzylsulfinyl-based
phthalimide derivatives.When coupled with dietary
tyramine, MAO-A inhibitors might cause
substantial side effects. When the MAO-A-catalyzed breakdown of tyramine
in intestinal endothelium is blocked, excessive levels of tyramine
reach the systemic circulation. Tyramine, an indirectly acting sympathomimetic
amine, induces peripheral adrenergic neurons to produce noradrenaline,
causing a severe hypertensive reaction that can be fatal.[57] As a result, MAO-A inhibitors have had little
therapeutic application. Reversible MAO-A inhibitors, such as moclobemide,
were found recently and are regarded to be safer than irreversible
MAO-A inhibitors. Moclobemide, for illustration, suppresses the tyramine
reaction while being effective as an antidepressant. As a result,
nonselective MAO blockers used to treat Parkinson’s disease
should be reversible in the best-case scenario.[58] Based on these concerns, Strydom et al.[59] looked into the prospect of phthalide derivatives (Figure ) acting as reversible
MAO inhibitors. Phthalide shares structural similarities with isatin
and phthalimide, two small compounds that have been demonstrated to
be good scaffolds for developing highly potential MAO inhibitors.
The benzyloxy moiety has been substituted for isatin at both the C-5
and C-6 locations, yielding strong MAO inhibitors. When compared to
the C-6 location, substitution on the C-5 site is more pleasing for
effective MAO-A and -B inhibition. Similarly, substituting the benzyloxy
moiety for the phthalimide at the C-5 location resulted in compounds
with significant MAO inhibitory properties. It has been demonstrated
that C-6-substituted phthalide analogues inhibit MAO-A and -B. Several
of the analogues show significant inhibition of both MAO isoforms,
indicating that they are dual MAO-A and -B inhibitors, despite the
fact that the phthalides mostly inhibit MAO-B. Furthermore, the data
suggest that phthalides have a reversible interaction with MAO-A and
-B. Reversibility and dual MAO-A/B inhibition are two required properties
for creating antiparkinsonian medications. It is worth mentioning
that phthalides with effective MAO-A and -B inhibitory effects can
be synthesized using a variety of C-6 substituents. This is beneficial
for improving the characteristics of these compounds since changes
to their structures, mainly the C-6 substituent, are less likely to
reduce MAO inhibition. C6 amino substituents, on the other hand, have
no effect on MAO inhibition, unlike oxy substituents. According to
the literature, 8-aminocaffeines are mild MAO inhibitors, but 8-oxycaffeines
are relatively powerful MAO inhibitors (compounds mention).
Figure 14
Structure
of phthalide-based derivative.
Structure
of phthalide-based derivative.According to the findings, the phthalide derivatives (Figure ) are now MAO-A
inhibitors as well. In fact, the IC50 values of 12 of the
19 analogues were in the submicromolar range (0.096–0.629 μM).
With an IC50 value of 0.0096 μM, 41 was
the most effective MAO-A inhibitor. This drug is also an effective
inhibitor of MAO-B (IC50 = 0.0062 μM). 41 is 16 times more selective for MAO-B than MAO-A, according to the
SI value. The remaining phthalide analogues examined, with the exclusion
of 39, demonstrated selective inhibition of MAO-B (SI
= 10–214). Despite the fact that the phthalides are MAO-B-specific
antagonists, most homologues have substantial MAO-A inhibitory effects;
therefore, they could be used in situations when both MAO-A and -B
reduction is required. Even though all of the phthalide derivatives
studied here are effective MAO-A and -B blockers, the following phthalides
are highly powerful dual MAO-A/B inhibitors: 38, 41, 42, and 43. These drugs have
IC50 values for both MAO isoforms that are less than 0.2
μM. Compound 40, another powerful dual inhibitor,
was discovered to be slightly selective of the phthalides tested[59] (SI = 10). In this study we conclude that after
substitution on the benzyloxy group, the CF3 > I >
Br >
Cl > H order increases MAO-B potency (Figure ). Increasing the benzyloxy chain did not
affect the MAO-B inhibition very much but in the MAO-A case increased
the affinity toward MAO-A.
Figure 15
Structure–activity relationship for
phthalide-based derivatives.
Structure–activity relationship for
phthalide-based derivatives.Tripathi et al.[60] investigated the design,
development, and in vitro assays of 3-hydroxy-3-phenacyloxindoles
that originated from isatin and compared their MAO-B and -A inhibitory
and binding prospects to those of reference compounds. The mechanisms
of inhibition of the most potent inhibitors against MAO-A and -B were
investigated using kinetic studies.The capability to inhibit
MAO-A and -B was investigated in vitro
using a number of isatin 3-hydroxy-3-phenacyloxindole derivatives
(Figure ) that were
designed, synthesized, and examined. Several isatin derivatives have
been recognized that block MAO-B and -A while causing little or no
neurotoxicity. Isatin derivatives (isatin and (E)-5-styrylisatin),
as well as a few reference MAO inhibitors, exhibit potent MAO inhibitory
activity (clorgyline, harmine, selegline, and rasagline). Isatin analogues
(isatin and (E)-5-styrylisatin), as well as a few
reference MAO blockers, show potent MAO inhibitory effects. The synthesis,
in silico and in vitro MAO-B and MAO-A inhibition studies of 3-hydroxy-3-phenacyl-oxindole
molecules derived from isatin, as well as comparisons of their MAO-B
and MAO-A binding and inhibition capacities to those of reference
inhibitor molecules are all part of this research. The modalities
of inhibition of the most effective inhibitor molecules 49 and 47 against MAO-A and MAO-B, respectively, were
studied using kinetic testing. Furthermore, docking simulation results
(Autodock 4.2) were used to calculate the free energy of binding (DG)
and inhibitory activity constant (KI) values of the MAO-B and MAO-A
inhibitors that were experimentally investigated as well as to gain
structural insight into the inhibitor substances’ binding modes
and types of interactions inside the active sites of MAO-A and MAO-B.
SAR analyses disclosed several structural characteristics significant
for the strength and selectivity of the suggested derivatives. The
first is a succession of hydroxylations, one of which should be isatin’s
C3 hydroxylation combined with the 3-phenacyl ring’s para hydroxylation.
In addition to the hydroxy group, bromination at the para position
of the 3-phenacyl side chain is critical for MAO-A activity and specificity.
The analysis clearly shows that compound 44 has the highest
activity, with a selectivity index of 60.44, followed by compound 47 and compound 51, which have SIs of 8.54 and
37.61, respectively. Apart from compounds 52, 58, 62, and 63, all compounds displayed pi–pi
interactions; pi–pi interactions with residue Tyr326 were identified
in compounds 47 and 50, respectively, and
with Tyr398 in compounds 53–56, 51, and 59–61. Furthermore,
compounds 46 and 48 exhibit pi–pi
interactions with Phe343; similarly, compounds 53–56, 60, and 61 have pi–pi
interactions with Tyr435. A pi–sigma interaction with Tyr326
stabilizes compounds 49 and 60 as well as
compounds 54 and 59 with FAD and molecule 59 with Ile199. Furthermore, hydrogen bond interactions with
Tyr435 were identified for compounds 45, 49, 57, 58, and 60 as well as 45, 49, 57, 62, and 63 for the FAD cofactor.[60]Figure concludes that
the halogenated phenyl ring on the R-1 position of isatin increases
MAO-B as well as MAO-A potency. The benzyl moiety at the R-2 position
of isatin increases affinity toward MAO-A.
Figure 16
Structure of phenacyloxindole
analogues
Figure 17
Structure–activity relationship
for phenacyloxindoles based
isatin derivatives.
Structure of phenacyloxindole
analoguesStructure–activity relationship
for phenacyloxindoles based
isatin derivatives.Tavari et al.[61] discovered that isatin
is a relatively effective MAO-B and -A inhibitor, with IC50 values of 12.07 μM and 22.54 μM, respectively, which
are consistent with prior findings. All of the novel test molecules
effectively inhibited MAO-A (IC50: 4.31–22.75 μM).
When the fluorophenylsulfonyl moiety (Figure a) was added to the 5 positions of isatin,
the molecules retained MAO-A inhibitory action (IC50 =
21.73 μM and 22.75 μM) and were even better MAO-A inhibitors
(65, IC50 = 8.26 μM) than isatin. The
MAO-A inhibitory activity of molecules with a propargylamine scaffold
on the N-position of the isatin scaffold was two times higher.
Figure 18
(a) Structure
of phenylsulfonyl-based isatin derivatives. (b) Interaction
with MAO-B and compound 65.
(a) Structure
of phenylsulfonyl-based isatin derivatives. (b) Interaction
with MAO-B and compound 65.The fluorophenyl amine moiety had a key role in the multipurpose
activity of the produced compounds, as evidenced by molecules 64 and 65. They are promising contestants for
antiapoptotic research, lead chemical development, and multifunctional
drug design since they have good inhibitory activity against MAO-A
and MAO-B, as well as great inhibitory activity against caspase-3.
Compounds 66, 64, 65, and 67 (Figure ), MAO-A-selective molecules with weak MAO-B and caspase-3 inhibitory
bioactivity, show that adding the propargylamine scaffold only increased
MAO-A inhibitory activity. Despite the lack of caspase-3 activity,
the groups in these molecules may work in a totally diverse way compared
to what was explored in this investigation. As a result, these compounds
show significant promise as novel multifunctional neuroprotective
drugs for the medication of Alzheimer’s disease, Huntington’s
disease, and Parkinson’s disease, while additional research
is needed to fully assess their potential in neurodegenerative disease
treatment. The binding mechanisms of compound 65 and
its propargylamine homologue 67 in MAO-A and -B were
investigated, utilizing molecular docking to gain more understanding.
The Brookhaven Protein Data Bank (www.rcsb.org/pdb) was used to get the structures of human MAO-A
cocrystallized with harmine (PDB entry: 2Z5X) and human MAO-B cocrystallized with
safinamide (PDB entry: 2V5Z). The isatin moiety binds in the polar area of the
substrate cavity in the vicinity of the FAD cofactor and the “aromatic
sandwich” formed by Tyr398 and Tyr435 in the best-ranked docking
solution of compound 65 inside the active site of MAO-B
(Figure b). This
dioxoindolyl ring binding orientation is identical to that of isatin
cocrystallized inside the active site of recombinant human MAO-B.
Ile199 is located in the enzyme’s entry cavity, and the C-5
fluorophenylsulfonyl side chain of 65 extends beyond
it. The cocrystallized inhibitor safinamide, which covers both active
site cavities, has a similar binding orientation. In contrast to its
MAO-B binding orientation, the isatin ring is located in the region
of the FAD cofactor in the best-ranked docking solution of 67, as shown in compound 65. Although the propargylamine
moiety is accommodated in the MAO-A active site cavity, its orientation
prevents interaction with the FAD cofactor. The isatin moiety’s
binding in the polar area of the substrate cavity in both 65 and 67 and probable interactions with adjacent amino
acid residues may be the explanation for their MAO-A inhibitory effect.
As observed in MAO-B modeling experiments, the para-fluorophenylsulfonyl moiety also exhibited a better orientation
and lower binding energy when compared to its meta and ortho counterparts.[61]In Figure , SAR
concludes that the R-position of isatin propargyl increases MAO-A
selectivity. The C-5 position at phenylsulfonyl in the position of
halogen also affects the MAO affinity.
Figure 19
Structure–activity
relationship for phenylsulfonyl-based
isatin derivatives.
Structure–activity
relationship for phenylsulfonyl-based
isatin derivatives.Vishnu et al.[62] synthesized a few isatin-based
derivatives of piperonylic-acid-derived hydrazones (Figure ). In a study, they wanted
to develop new multitarget-directed ligands that could inhibit both
MAO and ChE. The researchers then used the MTDL method to develop
and synthesize a variety of piperonylic-acid-derived hydrazones with
an isatin pharmacophore that had a variety of steric and electronic
properties, and they used molecular docking and enzyme screening assays
to estimate their pharmacological properties (in vitro ChE and MAO
inhibition assays). Based on early in vitro MAO and ChE inhibition
investigations, we discovered two lead compounds, molecules 68 and 69, that exhibit dual inhibitory activity
against both MAO and ChE. The majority of the molecules was found
to be more selective for MAO-B than MAO-A, with 69 being
more than 50 times more selective for MAO-B over MAO-A.[62]
Figure 20
Structure of piperonylic acid based isatin derivatives.
Structure of piperonylic acid based isatin derivatives.The ortho- and p-dichlorobenzyl
group at the R-1 position of the isatin ring has an MAO-A activity
that is ten times that of the p-fluorobenzyl analogue, 72, 71, and so on. Compound 72 (Figure ) which includes
a p-fluorobenzyl group at the R-1 location has significantly
lower activity than the other benzyl-substituted analogues. Molecules 69 and 65 with aliphatic propargyl and allyl
substituents at the R-1 location were more active than benzyl-substituted
analogues, with the exception of 73, which showed similar
results to 69. In compounds 72 and 73, substitution of p-fluoro or dichlorobenzyl
groups at the R-1 location increased MAO-B inhibitory action compared
to the unsubstituted benzyl derivative 71. Molecules 72 and 73 were three times more selective for
MAO-B than MAO-A, whereas 71 was the least selective
of the molecules examined. With the exception of the p-fluorobenzyl derivative 72, which displayed activity
similar to the allyl analogues 70, molecules 69 and 70 with aliphatic propargyl and allyl substituents
at the R-1 site were more active than benzyl-substituted analogues.
Although it was more selective and active than 71, adding
a chloro group to the R-2 position 68 did not result
in a significant increase in activity.[62] Overall, this study concludes that aliphatic propargyl and allyl
substituents are more active than benzyl for MAO inhibitory activity
(Figure ). Substitution
of halogens and electronegative groups does not affect MAO potency
very much.
Figure 21
Structure–activity relationship and interaction
with MAO-B
for piperonylic acid based isatin derivatives on MAO inhibition.
Structure–activity relationship and interaction
with MAO-B
for piperonylic acid based isatin derivatives on MAO inhibition.Many MAO-B inhibitors, including irreversible types
like selegiline
and rasagiline, have been produced for use in both Parkinsons and
Alzheimers treatment. The propargylamine moiety is a frequent kind
of irreversible inhibitor that covalently binds to the FAD cofactor
and can produce major adverse effects such as tyramine-induced hypertension.
To address this issue, a new family of inhibitors were created that
work by inhibiting MAO-B in a reversible manner. Safinamide, which
is used to treat Alzheimer’s disease, is now the only FDA-approved
reversible MAO-B inhibitor. Furthermore, isatin, an endogenous small
molecule, is reported as a reversible inhibitor of an MAO enzyme that
forms hydrogen bonds with conserved water molecules in the substrate
cavity near the FAD cofactor.[62] Some isatin-based
drugs have been demonstrated to suppress MAO-B activity in this regard.
They used a docking approach to compare the interactions of freshly
synthesized compounds with reference MAO-B inhibitors over the MAO-B
active site. Based on the IFD score, the top-scoring pose of all compounds
was chosen and examined for analysis and free binding affinity computation
with the help of the MM-GBSA method. All of the test inhibitors bind
to the active site of the MAO-B cavity. All of the inhibitors bind
to both the entrance cavity, which is surrounded by residues Leu171,
Ile199, and Tyr326, and the substrate cavity, which is surrounded
by residues Tyr60, Ile168, Cys172, Gln206, Phe343, Tyr398, and Tyr435;
this is similar to the position taken by the reference MAO bionhibitor,
safinamide. Safinamide’s amide side chain was pointed toward
the FAD molecule and the fluorobenzyl group. Hydrogen-bonding interactions
with the inhibitors were found at residues Tyr188, Ile199, Tyr326,
Ile198, Gln206, Tyr435, and Cys172. Compound 68 hydrogen
bonded with residues Ile199, Tyr326, Gln206, and Ile198, whereas compound 69 hydrogen bonded with residues Ile199, Tyr326, Gln206, and
Ile198. Compound 70 formed hydrogen bonds with Gln206,
and 70 reacted with Ile198. Gln206, Cys172, and Ile198
were hydrogen bonded with a molecule 71. Compound 72 has comparable hydrogen-bonding affinities with Gln206
and Ile198 (Figure ). Based on these findings, it was determined that p-alkyl and hydrogen-bonding interactions are responsible for the
majority of the powerful drug inhibition of MAO-B.Ahmadi et
al.[63] created 3-imino indolin-2-one
compounds (Figure a) and tested them biologically for their inhibitory profiles of
MAOs. Recently, the synthesis of 3-imino indolin-2-one compounds was
performed using reflux circumstances with a wide range of solvents.
All of the produced compounds showed greater free binding affinity
than isatin, with the exception of molecule 3-imino indolin-2-one
(known as a reversible noncovalent MAO-B inhibitor). Compounds 74, 75, 77, 76, and 78 exhibit greater free binding energy than selegiline when
compared to the values shown in the MM-GBSA column. This study suggested
that isatin analogues had a high affinity for the MAO-B enzyme’s
active region.
Figure 22
(a) Structure of imino-based isatin derivatives. (b) Compound 76 with MAO-B interactions.
(a) Structure of imino-based isatin derivatives. (b) Compound 76 with MAO-B interactions.The molecule isatin, which has a molar mass of 147.13, is a reversible
inhibitor of hMAO-B with a modest affinity for this specific target.
In our test, all molecules showed good affinity toward both the MAO
enzymes. Here the compounds were subjected to Induced-Fit docking,
and it was observed that isatin interacts weakly with Ile198, Leu171,
and Ile199 and creates a bridging H connection with the FAD molecule
via a water molecule bond. However, the isatin analogues showed affinity
greater than that of isatin. Among these synthesized compounds, 76 showed the highest free binding energy and was seen to
have an extended conformation to the entrance cavity of the substrate
from the flavin ring location. The imino group of 76 was
sustained through the MAO-B active center by creating a hydrogen bond
interaction with Tyr435 in the same way as the selegiline tertiary
amine was sustained, except for the longer MD simulation period. Interestingly,
within the first 12 ns of MD simulation time, compound 76 showed an interaction with Lue171 and Cys172 (Figure b) located at the center of
the substrate cavity via hydrophobic binding. The Ile199 side chain
was seen along the boundary of the active center, which correlates
to the open conformer, in the enzyme complex with compound 76, whereas the stated residue side chain moved forward toward the
catalytically active cavity in the selegiline-bound state. In conclusion,
from this literature, we learn that these 3-imino indolin-2-one compounds
maybe good inhibitors, provided they showed good drug profiling based
on the in silico analysis as well as the MTT assay.[63]Fragment-based drug discovery (FBDD) involves discovering
tiny
chemical fragments that may only interact weakly with the receptor
and then develop or integrate them to create a lead with a greater
affinity. Based on the crystallographic structure of hMAO-B isatin,
it was found that isatin was bound in the substrate cavity, and a
different compound 36 was bound to the entrance cavity.
From this they supposed that to grow that particular fragment in order
to develop compounds that can occupy the region in the entrance cavity,
an increased selectivity and higher potency against MAO-B has to take
place. It was seen that among both the carbonyl groups one is seen
in the hydrophobic environment. Thus, they came to a conclusion that
by modifying the particular carbonyl groups they can produce higher
binding affinity compounds.Surprisingly, they were not able
to see mandy good results, as
expected by the modification of carbonyl groups. The PDB ID used by
them is 2XFP which contained the isatin and compound 36 complex.
A comparison study with PDB ID 2V5Z, a complex which contained safinamide
as its cocrystallized ligand, focused on five different scaffolds
(Figure ) and their
derivatives (Figure ). A wide range of derivatives of all the five scaffolds were synthesized
and subjected to their MAO inhibitory activity[44] by Cheng et al.[44] Scaffold A
was created by the extension of an aromatic moiety from the fifth
position of isatin, which has a strong affinity for hMAO-B, and Scaffold
B with an indolin-2-one frame was created by cleavage of the 3-one
group off the isatin core of Scaffold A. Nine molecules were then
produced (Scaffold D). The sp2-hybridized carbon in the
3-one of isatin was altered to sp3 in this scaffold, resulting
in the CH3 groups being linked to this sp3 hybrid
carbon and oriented differently from the 3-one of isatin. 1,3-Dihydro-2H-benzo-imidazol-2-one is the frame of Scaffold E. Scaffold
E was created by converting the isatin portion of Scaffold A’s
3-one group to a tertiary amine. As a result, none of the synthesized
compounds showed good inhibitory activity. Compound 76 was created by extending a (3,4-dichlorobenzyl) oxy moiety from
isatin’s 5 location, and it possesses outstanding potency (IC 50 = 0.003 μM) and isozyme selectivity (SI = 38 933)
against hMAO-B, which is followed by 79, 80, and 82 with IC50 values of 0.046 ±
0.007 μM, 0.073 ± 0.004 μM, and 0.102 ± 0.023
μM, respectively. While comparing the best four compounds of
the A series, it is clearly seen that the compounds exhibit activity
in the order 81 > 79 > 80.
Compound 83, a poor hMAO-B inhibitor with an IC50 value of 7.68 M, was created by changing the 3-one to a nonpolar
methyl group, which has a similar size but a diverse charge distribution.
Figure 23
Structure
of isatin-based differently derived scaffolds.
Figure 24
Structure
of benzyloxy-based isatin derivatives.
Structure
of isatin-based differently derived scaffolds.Structure
of benzyloxy-based isatin derivatives.The IC 50 value of 83 toward hMAO-B is just 7.68 μM,
compared to 2560 times that for 81 (IC 50 = 0.003 μM).
Among the 26 compounds synthesized of the E series, only 8 compounds
showed activity toward the hMAO-B enzyme, and from the 8 compounds
that showed hMAO-B inhibitory activity, compound 83 showed
the maximum hMAO-B inhibitory activity with an IC50 value
of 7.68 ± 0.58 μM followed by 86, 84, and 85 with IC50 values of 34.30 ±
0.97 μM, 56.40 ± 1.12 μM, and 59.63 ± 1.21 μM,
respectively.[44]Overall, this SAR
(Figure ) study
concludes that, by increasing the length of the benzyloxy
bridge, a decrease in the MAO inhibition occurs. The benzoyl moiety
when substituted with halogen also affects MAO-B inhibition. Isatin
in the 3-one group when replaced with an amine group may cause no
inhibition or may affect MAO inhibition in an uncontrollable manner.
Figure 25
Structure–activity
relationship for benzyloxy-based isatin
derivatives.
Structure–activity
relationship for benzyloxy-based isatin
derivatives.
Conclusions and Future Perspective
Isatin’s wide range of reactivity has made it a desirable
building block for the creation of a variety of heterocyclic scaffolds.
Isatin and their analogues, i.e., phthalide and phthalimide, are promising
scaffolds biologically and medicinally, fulfilling the huge range
of biological profiles. In conclusion, the benzyloxy and benzal moiety
were substituted for isatin at both the positions C-6 and C-5, resulting
in strong MAO inhibition. A hydroxyl group substituted for isatin
at the C-5 position strongly and selectivity inhibits MAO-A. Benzyl
substitution on the N-1 location of isatin is more selective for MAO-A
than MAO-B. Halogen group substitution also exhibits increased MAO
inhibitory activity. Benzyloxy and benzylsulfinyl with a halogen substituent
at the C-5 position of the phthalimide increase the MAO efficacy.
In the case of phthalide, at the C-5 position, benzyloxy enhances
the MAO-B as well as MAO-A inhibition. This overall SAR analysis study
will be useful for researchers who work in MAO-related diseases. For
the future perspective point of view, we can modify and chop the isatin
C-3 keto group and introduce a natural hydrophobic moiety for better
interaction, as the already discussed MAO pocket is hydrophobic and
enclosed with aromatic and aliphatic residues. All this information
will be helpful in the design and development of a new class of drugs
for the therapy of neurodegenerative diseases.
Authors: A G Bharathi Dileepan; T Daniel Prakash; A Ganesh Kumar; P Shameela Rajam; V Violet Dhayabaran; R Rajaram Journal: J Photochem Photobiol B Date: 2018-04-21 Impact factor: 6.252
Authors: Raphael Enoque Ferraz de Paiva; Eduardo Guimarães Vieira; Daniel Rodrigues da Silva; Camila Anchau Wegermann; Ana Maria Costa Ferreira Journal: Front Mol Biosci Date: 2021-02-04