Literature DB >> 35599021

Mitochondrial genome engineering coming-of-age.

Jose Domingo Barrera-Paez1, Carlos T Moraes2.   

Abstract

The mitochondrial genome has been difficult to manipulate because it is shielded by the organelle double membranes, preventing efficient nucleic acid entry. Moreover, mitochondrial DNA (mtDNA) recombination is not a robust system in most species. This limitation has forced investigators to rely on naturally occurring alterations to study both mitochondrial function and pathobiology. Because most pathogenic mtDNA mutations are heteroplasmic, the development of specific nucleases has allowed us to selectively eliminate mutant species. Several 'protein only' gene-editing platforms have been successfully used for this purpose. More recently, a DNA double-strand cytidine deaminase has been identified and adapted to edit mtDNA. This enzyme was also used as a component to adapt a DNA single-strand deoxyadenosine deaminase to mtDNA editing. These are major advances in our ability to precisely alter the mtDNA in animal cells.
Copyright © 2022 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  TALEN; gene editing; genetic engineering; mitochondria

Mesh:

Substances:

Year:  2022        PMID: 35599021      PMCID: PMC9283244          DOI: 10.1016/j.tig.2022.04.011

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.821


  76 in total

Review 1.  Genome engineering with zinc-finger nucleases.

Authors:  Dana Carroll
Journal:  Genetics       Date:  2011-08       Impact factor: 4.562

2.  Development of a mito-CRISPR system for generating mitochondrial DNA-deleted strain in Saccharomyces cerevisiae.

Authors:  Takamitsu Amai; Tomoka Tsuji; Mitsuyoshi Ueda; Kouichi Kuroda
Journal:  Biosci Biotechnol Biochem       Date:  2021-03-24       Impact factor: 2.043

3.  Targeted A-to-G base editing in human mitochondrial DNA with programmable deaminases.

Authors:  Sung-Ik Cho; Seonghyun Lee; Young Geun Mok; Kayeong Lim; Jaesuk Lee; Ji Min Lee; Eugene Chung; Jin-Soo Kim
Journal:  Cell       Date:  2022-04-25       Impact factor: 66.850

4.  Mitochondrial targeted meganuclease as a platform to eliminate mutant mtDNA in vivo.

Authors:  Ugne Zekonyte; Sandra R Bacman; Jeff Smith; Wendy Shoop; Claudia V Pereira; Ginger Tomberlin; James Stewart; Derek Jantz; Carlos T Moraes
Journal:  Nat Commun       Date:  2021-05-28       Impact factor: 14.919

5.  Prevalence of nuclear and mitochondrial DNA mutations related to adult mitochondrial disease.

Authors:  Gráinne S Gorman; Andrew M Schaefer; Yi Ng; Nicholas Gomez; Emma L Blakely; Charlotte L Alston; Catherine Feeney; Rita Horvath; Patrick Yu-Wai-Man; Patrick F Chinnery; Robert W Taylor; Douglass M Turnbull; Robert McFarland
Journal:  Ann Neurol       Date:  2015-03-28       Impact factor: 10.422

6.  Intra- and inter-molecular recombination of mitochondrial DNA after in vivo induction of multiple double-strand breaks.

Authors:  Sandra R Bacman; Sion L Williams; Carlos T Moraes
Journal:  Nucleic Acids Res       Date:  2009-05-12       Impact factor: 16.971

7.  Specific elimination of mutant mitochondrial genomes in patient-derived cells by mitoTALENs.

Authors:  Sandra R Bacman; Siôn L Williams; Milena Pinto; Susana Peralta; Carlos T Moraes
Journal:  Nat Med       Date:  2013-08-04       Impact factor: 53.440

8.  Genome editing in mitochondria corrects a pathogenic mtDNA mutation in vivo.

Authors:  Payam A Gammage; Carlo Viscomi; Marie-Lune Simard; Ana S H Costa; Edoardo Gaude; Christopher A Powell; Lindsey Van Haute; Beverly J McCann; Pedro Rebelo-Guiomar; Raffaele Cerutti; Lei Zhang; Edward J Rebar; Massimo Zeviani; Christian Frezza; James B Stewart; Michal Minczuk
Journal:  Nat Med       Date:  2018-09-24       Impact factor: 53.440

9.  Validation of a mitochondrial RNA therapeutic strategy using fibroblasts from a Leigh syndrome patient with a mutation in the mitochondrial ND3 gene.

Authors:  Yuma Yamada; Kana Somiya; Akihiko Miyauchi; Hitoshi Osaka; Hideyoshi Harashima
Journal:  Sci Rep       Date:  2020-05-05       Impact factor: 4.379

Review 10.  Novel CRISPR-Cas Systems: An Updated Review of the Current Achievements, Applications, and Future Research Perspectives.

Authors:  Sweta Nidhi; Uttpal Anand; Patrik Oleksak; Pooja Tripathi; Jonathan A Lal; George Thomas; Kamil Kuca; Vijay Tripathi
Journal:  Int J Mol Sci       Date:  2021-03-24       Impact factor: 5.923

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  1 in total

Review 1.  Mitochondrial DNA mutations in ageing and cancer.

Authors:  Anna L M Smith; Julia C Whitehall; Laura C Greaves
Journal:  Mol Oncol       Date:  2022-07-28       Impact factor: 7.449

  1 in total

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