| Literature DB >> 35589670 |
Chao Wang1,2, Yujing Zhang3, Lingyu Shi1,2, Shanbo Yang1,2, Jing Chang1,2, Yingjie Zhong1,2, Qian Li1,2, Dongming Xing1,2,4.
Abstract
Proteolytic targeting chimaeras (PROTACs) have been developed as an effective technology for targeted protein degradation. PROTACs are heterobifunctional molecules that can trigger the polyubiquitination of proteins of interest (POIs) by recruiting the ubiquitin-proteasome system, thereby inhibiting the intracellular level of POIs. To date, a variety of small-molecule PROTACs (CRBN, VHL, IAP, and MDM2-based PROTACs) have been developed. IAP-based PROTACs, also known as specific and nongenetic IAP-dependent protein erasers (SNIPERs), are used to degrade the target proteins closely related to diseases. Their structures consist of three parts, including target protein ligand, E3 ligase ligand, and the linker between them. So far, many SNIPERs have been extensively studied worldwide and have performed well in multiple diseases, especially cancer. In this review, we will present the most relevant advances in the field of SNIPERs and provide our perspective on the opportunities and challenges for SNIPERs to become therapeutic agents.Entities:
Keywords: IAP; PROTACs; SNIPERs; degradation; promising treatment
Mesh:
Substances:
Year: 2022 PMID: 35589670 PMCID: PMC9122363 DOI: 10.1080/14756366.2022.2074414
Source DB: PubMed Journal: J Enzyme Inhib Med Chem ISSN: 1475-6366 Impact factor: 5.756
Figure 1.PROTACs-mediated degradation of target proteins through the UPS.
Figure 2.The number of publications on PROTACs/SNIPERs in PubMed (accessed on 12/13/2021).
Overview of current PROTACs.
| Degraders | Description | Advantages | Disadvantages |
|---|---|---|---|
| CRBN-based PROTACs | Bifunctionals recruiting E3 CRBN; by far most common degrading mechanism used. | Wide target scope; compact warhead can allow oral exposure. | Narrow warhead SAR; heterogeneous responses across cells; high resistance potential; toxicological issues. |
| VHL-based PROTACs | Bifunctionals recruiting E3 VHL; second only to CRBN in breadth of reported use. | Bifunctionals recruiting E3 VHL; second only to CRBN in breadth of reported use. | High complexity of warheads limits oral exposure, CNS penetration, etc. |
| IAP-based PROTACs | Bifunctionals recruiting multiple E3s including cAIP1, cIAP2, and XIAP. | Parallel degrading pathways with potential to increase degradation efficiency. | Target scope not as well defined due to fewer reports; high warhead complexity limits druglike properties. |
| PROTACs based on other E3 ligases | Bifunctionals recruiting other E3 ligases, such as MDM2, RNF114, and DCAF15, 16. | Can offer novel profiles and novel chemical warheads. | Few data yet to assess potential; dependency on single ligase can cause scope and resistance issues. |
Figure 3.Timeline and major milestones for the development of SNIPERs.
Figure 4.Chemical structures of small-molecular IAP ligands.
Figure 5.Frequency of IAP ligands used in SNIPERs.
Representative SNIPER targeting AR.
| Compound | Target | Structure | Reference |
|---|---|---|---|
| SNIPER-1 | AR |
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Representative SNIPER targeting BCL-XL.
| Compound | Target | Structure | Reference |
|---|---|---|---|
| SNIPER-2 | BCL-XL |
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Representative SNIPERs targeting BCR-ABL.
| Compounds | Target | Structure | References |
|---|---|---|---|
| SNIPER-3 | BCR-ABL |
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| SNIPER-4 | BCR-ABL |
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| SNIPER-5 | BCR-ABL |
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| SNIPER-6 | BCR-ABL |
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Representative SNIPERs targeting BRD4.
| Compounds | Target | Structure | References |
|---|---|---|---|
| SNIPER-7 | BRD4 |
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| SNIPER-8 | BRD4 |
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| SNIPER-9 | BRD4 |
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| SNIPER-10 | BRD4 |
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Representative SNIPERs targeting BTK.
| Compounds | Target | Structure | References |
|---|---|---|---|
| SNIPER-11 | BTK |
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| SNIPER-12 | BTK |
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| SNIPER-13 | BTK |
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Representative SNIPERs targeting CDK.
| Compounds | Target | Structure | References |
|---|---|---|---|
| SNIPER-14 | CDK |
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| SNIPER-15 | CDK |
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| SNIPER-16 | CDK |
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| SNIPER-17 | CDK |
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| SNIPER-18 | CDK |
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| SNIPER-19 | CDK |
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| SNIPER-20 | CDK |
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Representative SNIPERs targeting CRABP-II.
| Compounds | Target | Structure | References |
|---|---|---|---|
| SNIPER-21 | CRABP-II |
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| SNIPER-22 | CRABP-II |
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| SNIPER-23 | CRABP-II |
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Representative SNIPER targeting EGFR.
| Compound | Target | Structure | Reference |
|---|---|---|---|
| SNIPER-24 | EGFR |
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Representative SNIPERs targeting ER.
| Compounds | Target | Structure | References |
|---|---|---|---|
| SNIPER-25 | ER |
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| SNIPER-26 | ER |
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| SNIPER-27 | ER |
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| SNIPER-28 | ER |
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| SNIPER-29 | ER |
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| SNIPER-30 | ER |
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| SNIPER-31 | ER |
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| SNIPER-32 | ER |
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| SNIPER-33 | ER |
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Representative SNIPERs targeting HDAC.
| Compounds | Target | Structure | References |
|---|---|---|---|
| SNIPER-34 | HDACs |
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| SNIPER-35 | HDACs |
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| SNIPER-36 | HDACs |
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Representative SNIPER targeting JAK.
| Compounds | Target | Structure | Reference |
|---|---|---|---|
| SNIPER-37 | JAK |
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Representative SNIPER targeting NOTCH1.
| Compounds | Target | Structure | Reference |
|---|---|---|---|
| SNIPER-38 | NOTCH1 |
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Representative SNIPER targeting P97.
| Compounds | Target | Structure | Reference |
|---|---|---|---|
| SNIPER-39 | P97 |
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Representative SNIPER targeting TACC3.
| Compounds | Target | Structure | Reference |
|---|---|---|---|
| SNIPER-40 | TACC3 |
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Representative SNIPER targeting H-PGDS.
| Compounds | Target | Structure | Reference |
|---|---|---|---|
| SNIPER-41 | H-PGDS |
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Representative SNIPERs targeting IRAK4.
| Compounds | Target | Structure | References |
|---|---|---|---|
| SNIPER-42 | IRAK4 |
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| SNIPER-43 | IRAK4 |
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Representative SNIPERs targeting RIPK2.
| Compounds | Target | Structure | References |
|---|---|---|---|
| SNIPER-44 | RIPK2 |
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| SNIPER-45 | RIPK2 |
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| SNIPER-46 | RIPK2 |
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| SNIPER-47 | RIPK2 |
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Representative SNIPERs targeting mHtt.
| Compounds | Target | Structure | References |
|---|---|---|---|
| SNIPER-48 | mHtt |
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| SNIPER-49 | mHtt |
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Representative SNIPER targeting PDE4.
| Compounds | Target | Structure | Reference |
|---|---|---|---|
| SNIPER-50 | PDE4 |
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Representative SNIPER targeting RAR.
| Compounds | Target | Structure | Reference |
|---|---|---|---|
| SNIPER-51 | RARα |
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