Literature DB >> 35583645

New "Omics" Approaches as Tools to Explore Mechanistic Nanotoxicology.

Célia Ventura1,2, Vukosava Torres3,4, Luís Vieira5,6, Bruno Gomes6, António Sebastião Rodrigues6, José Rueff6, Deborah Penque5,6, Maria João Silva5,6.   

Abstract

In the last years, "omics" approaches have been applied to study the toxicity of nanomaterials (NM) with the aim of obtaining insightful information on their biological effects. One of the most developed "omics" field, transcriptomics, expects to find unique profiles of differentially-expressed genes after exposure to NM that, besides providing evidence of their mechanistic mode of action, may also be used as biomarkers for biomonitoring purposes. Moreover, several NM have been associated with epigenetic alterations, i.e., changes in the regulation of gene expression caused by differential DNA methylation, histone tail modification and microRNA expression. Epigenomics research focusing on DNA methylation is increasingly common and the role of microRNAs is being better understood, either promoting or suppressing biological pathways. Moreover, the proteome is a highly dynamic system that changes constantly in response to a stimulus. Therefore, proteomics can identify changes in protein abundance and/or variability that lead to a better understanding of the underlying mechanisms of action of NM while discovering biomarkers. As to genomics, it is still not well developed in nanotoxicology. Nevertheless, the individual susceptibility to NM mediated by constitutive or acquired genomic variants represents an important component in understanding the variations in the biological response to NM exposure and, consequently, a key factor to evaluate possible adverse effects in exposed individuals. By elucidating the molecular changes that are involved NM toxicity, the new "omics" studies are expected to contribute to exclude or reduce the handling of hazardous NM in the workplace and support the implementation of regulation to protect human health.
© 2022. The Author(s), under exclusive license to Springer Nature Switzerland AG.

Entities:  

Keywords:  Epigenomics; Nanomaterials; Proteomics; Toxicogenomics; Transcriptomics; microRNAs

Mesh:

Substances:

Year:  2022        PMID: 35583645     DOI: 10.1007/978-3-030-88071-2_8

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  47 in total

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Journal:  Environ Toxicol Chem       Date:  2010-03       Impact factor: 3.742

Review 2.  Protein degradation, aggregation, and misfolding.

Authors:  Ana Maria Cuervo; Esther S P Wong; Marta Martinez-Vicente
Journal:  Mov Disord       Date:  2010       Impact factor: 10.338

3.  Differential proteomics highlights macrophage-specific responses to amorphous silica nanoparticles.

Authors:  Bastien Dalzon; Catherine Aude-Garcia; Véronique Collin-Faure; Hélène Diemer; David Béal; Fanny Dussert; Daphna Fenel; Guy Schoehn; Sarah Cianférani; Marie Carrière; Thierry Rabilloud
Journal:  Nanoscale       Date:  2017-07-13       Impact factor: 7.790

4.  Alterations in DNA methylation corresponding with lung inflammation and as a biomarker for disease development after MWCNT exposure.

Authors:  Traci A Brown; Joong Won Lee; Andrij Holian; Virginia Porter; Harley Fredriksen; Minju Kim; Yoon Hee Cho
Journal:  Nanotoxicology       Date:  2015-09-16       Impact factor: 5.913

5.  Transcriptional profiling reveals gene expression changes associated with inflammation and cell proliferation following short-term inhalation exposure to copper oxide nanoparticles.

Authors:  Pedro M Costa; Ilse Gosens; Andrew Williams; Lucian Farcal; Daniele Pantano; David M Brown; Vicki Stone; Flemming R Cassee; Sabina Halappanavar; Bengt Fadeel
Journal:  J Appl Toxicol       Date:  2017-11-02       Impact factor: 3.446

6.  Mathematical Nanotoxicoproteomics: Quantitative Characterization of Effects of Multi-walled Carbon Nanotubes (MWCNT) and TiO2 Nanobelts (TiO2-NB) on Protein Expression Patterns in Human Intestinal Cells.

Authors:  Subhash C Basak; Marjan Vracko; Frank A Witzmann
Journal:  Curr Comput Aided Drug Des       Date:  2016       Impact factor: 1.606

7.  Characterization of microRNAs in serum: a novel class of biomarkers for diagnosis of cancer and other diseases.

Authors:  Xi Chen; Yi Ba; Lijia Ma; Xing Cai; Yuan Yin; Kehui Wang; Jigang Guo; Yujing Zhang; Jiangning Chen; Xing Guo; Qibin Li; Xiaoying Li; Wenjing Wang; Yan Zhang; Jin Wang; Xueyuan Jiang; Yang Xiang; Chen Xu; Pingping Zheng; Juanbin Zhang; Ruiqiang Li; Hongjie Zhang; Xiaobin Shang; Ting Gong; Guang Ning; Jun Wang; Ke Zen; Junfeng Zhang; Chen-Yu Zhang
Journal:  Cell Res       Date:  2008-10       Impact factor: 25.617

8.  Single-walled carbon nanotubes can induce pulmonary injury in mouse model.

Authors:  Cheng-Chung Chou; Hsiang-Yun Hsiao; Qi-Sheng Hong; Chun-Houh Chen; Ya-Wen Peng; Huei-Wen Chen; Pan-Chyr Yang
Journal:  Nano Lett       Date:  2008-01-29       Impact factor: 11.189

9.  Substantial modification of the gene expression profile following exposure of macrophages to welding-related nanoparticles.

Authors:  Étienne Audureau; Angélique Simon-Deckers; Marie-Laure Franco-Montoya; Balasubramanyam Annangi; Ali Kermanizadeh; Jorge Boczkowski; Sophie Lanone
Journal:  Sci Rep       Date:  2018-06-04       Impact factor: 4.379

10.  Mass spectrometry and planetary exploration: A brief review and future projection.

Authors:  Ricardo Arevalo; Ziqin Ni; Ryan M Danell
Journal:  J Mass Spectrom       Date:  2019-11-28       Impact factor: 1.982

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