Literature DB >> 35577994

Genetic Diversity and Population Structure of Psidium Species from Restinga: A Coastal and Disturbed Ecosystem of the Brazilian Atlantic Forest.

Carolina de Oliveira Bernardes1, Amélia Carlos Tuler2, Drielli Canal1, Marina Santos Carvalho1, Adésio Ferreira1, Marcia Flores da Silva Ferreira3.   

Abstract

The Atlantic Forest is one of the most threatened biomes in the world. Here, we use a common set of microsatellite markers to assess the genetic diversity and population structure of three species from the genus Psidium (P. guajava, P. macahense, and P. guineense), located in a disturbed environment of the Atlantic Forest, the restinga, in Espírito Santo, Brazil. Psidium guajava populations presented the highest number of alleles (95) followed by P. guineense (81) and P. macahense (68). The genetic variability was high (P. guajava = 0.71; P. guineense = 0.74; P. macahense = 0.63), with greater variation within populations (72 to 84%) than among populations (15 to 27%), reflecting elevated values of genetic differentiation (P. guajava, FST: 0.15; P. macahense, ØST: 0.27; P. guineense, ØST: 0.21). The populations were clustered into two main groups and considered moderately structured. This is the first report of genetic studies and evidence of polyploidy to P. macahense. Our results may provide information that can be used in management and conservation strategies, to preserve the diversity of Psidium populations.
© 2022. Springer Science+Business Media, LLC, part of Springer Nature.

Entities:  

Keywords:  Conservation; Diversity; Microsatellites; Myrtaceae

Year:  2022        PMID: 35577994     DOI: 10.1007/s10528-022-10222-7

Source DB:  PubMed          Journal:  Biochem Genet        ISSN: 0006-2928            Impact factor:   1.890


  15 in total

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Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

2.  A simple method for the calculation of microsatellite genotype distances irrespective of ploidy level.

Authors:  Ruzica Bruvo; Nicolaas K Michiels; Thomas G D'Souza; Hinrich Schulenburg
Journal:  Mol Ecol       Date:  2004-07       Impact factor: 6.185

3.  Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.

Authors:  G Evanno; S Regnaut; J Goudet
Journal:  Mol Ecol       Date:  2005-07       Impact factor: 6.185

4.  Simple allelic-phenotype diversity and differentiation statistics for allopolyploids.

Authors:  D J Obbard; S A Harris; J R Pannell
Journal:  Heredity (Edinb)       Date:  2006-07-05       Impact factor: 3.821

5.  Detecting population structure using STRUCTURE software: effect of background linkage disequilibrium.

Authors:  R Kaeuffer; D Réale; D W Coltman; D Pontier
Journal:  Heredity (Edinb)       Date:  2007-07-11       Impact factor: 3.821

6.  Genetic variation and structure in the Mediterranean shrubs Myrtus communis and Pistacia lentiscus in different landscape contexts.

Authors:  S Nora; R G Albaladejo; A Aparicio
Journal:  Plant Biol (Stuttg)       Date:  2014-09-26       Impact factor: 3.081

7.  Spatial genetic structure within size classes of the endangered tropical tree Guaiacum sanctum (Zygophyllaceae).

Authors:  Eric J Fuchs; James L Hamrick
Journal:  Am J Bot       Date:  2010-06-22       Impact factor: 3.844

8.  Population Genetics of Polyploid Complex Psidium cattleyanum Sabine (Myrtaceae): Preliminary Analyses Based on New Species-Specific Microsatellite Loci and Extension to Other Species of the Genus.

Authors:  Raquel Moura Machado; Fernanda Ancelmo de Oliveira; Fábio de Matos Alves; Anete Pereira de Souza; Eliana Regina Forni-Martins
Journal:  Biochem Genet       Date:  2020-09-27       Impact factor: 1.890

9.  Estimating genomic diversity and population differentiation - an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri.

Authors:  Martin C Fischer; Christian Rellstab; Marianne Leuzinger; Marie Roumet; Felix Gugerli; Kentaro K Shimizu; Rolf Holderegger; Alex Widmer
Journal:  BMC Genomics       Date:  2017-01-11       Impact factor: 3.969

10.  Refinement of the karyological aspects of Psidium guineense (Swartz, 1788): a comparison with Psidium guajava (Linnaeus, 1753).

Authors:  Anelise Machado Marques; Amélia Carlos Tuler; Carlos Roberto Carvalho; Tatiana Tavares Carrijo; Marcia Flores da Silva Ferreira; Wellington Ronildo Clarindo
Journal:  Comp Cytogenet       Date:  2016-02-02       Impact factor: 1.800

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