Literature DB >> 35575684

Cryo-electron Microscopy of Adeno-associated Virus.

Scott M Stagg1,2, Craig Yoshioka3, Omar Davulcu4, Michael S Chapman5.   

Abstract

Adeno-associated virus (AAV) has a single-stranded DNA genome encapsidated in a small icosahedrally symmetric protein shell with 60 subunits. AAV is the leading delivery vector in emerging gene therapy treatments for inherited disorders, so its structure and molecular interactions with human hosts are of intense interest. A wide array of electron microscopic approaches have been used to visualize the virus and its complexes, depending on the scientific question, technology available, and amenability of the sample. Approaches range from subvolume tomographic analyses of complexes with large and flexible host proteins to detailed analysis of atomic interactions within the virus and with small ligands at resolutions as high as 1.6 Å. Analyses have led to the reclassification of glycan receptors as attachment factors, to structures with a new-found receptor protein, to identification of the epitopes of antibodies, and a new understanding of possible neutralization mechanisms. AAV is now well-enough characterized that it has also become a model system for EM methods development. Heralding a new era, cryo-EM is now also being deployed as an analytic tool in the process development and production quality control of high value pharmaceutical biologics, namely AAV vectors.

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Year:  2022        PMID: 35575684      PMCID: PMC9479082          DOI: 10.1021/acs.chemrev.1c00936

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   72.087


  310 in total

Review 1.  Structural folds of viral proteins.

Authors:  Michael S Chapman; Lars Liljas
Journal:  Adv Protein Chem       Date:  2003

2.  Production of high-titer recombinant adeno-associated virus vectors in the absence of helper adenovirus.

Authors:  X Xiao; J Li; R J Samulski
Journal:  J Virol       Date:  1998-03       Impact factor: 5.103

3.  Several rAAV vectors efficiently cross the blood-brain barrier and transduce neurons and astrocytes in the neonatal mouse central nervous system.

Authors:  Hongwei Zhang; Bin Yang; Xin Mu; Seemin Seher Ahmed; Qin Su; Ran He; Hongyan Wang; Christian Mueller; Miguel Sena-Esteves; Robert Brown; Zuoshang Xu; Guangping Gao
Journal:  Mol Ther       Date:  2011-05-24       Impact factor: 11.454

Review 4.  Gene Therapy for Hemophilia.

Authors:  Arthur W Nienhuis; Amit C Nathwani; Andrew M Davidoff
Journal:  Mol Ther       Date:  2017-04-11       Impact factor: 11.454

Review 5.  Adeno-associated virus (AAV) cell entry: structural insights.

Authors:  Nancy L Meyer; Michael S Chapman
Journal:  Trends Microbiol       Date:  2021-10-25       Impact factor: 17.079

6.  Recurrent AAV2-related insertional mutagenesis in human hepatocellular carcinomas.

Authors:  Jean-Charles Nault; Shalini Datta; Sandrine Imbeaud; Andrea Franconi; Maxime Mallet; Gabrielle Couchy; Eric Letouzé; Camilla Pilati; Benjamin Verret; Jean-Frédéric Blanc; Charles Balabaud; Julien Calderaro; Alexis Laurent; Mélanie Letexier; Paulette Bioulac-Sage; Fabien Calvo; Jessica Zucman-Rossi
Journal:  Nat Genet       Date:  2015-08-24       Impact factor: 38.330

7.  Automatic estimation and correction of anisotropic magnification distortion in electron microscopes.

Authors:  Timothy Grant; Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2015-08-13       Impact factor: 2.867

8.  The 2.8 Å Electron Microscopy Structure of Adeno-Associated Virus-DJ Bound by a Heparinoid Pentasaccharide.

Authors:  Qing Xie; John M Spear; Alex J Noble; Duncan R Sousa; Nancy L Meyer; Omar Davulcu; Fuming Zhang; Robert J Linhardt; Scott M Stagg; Michael S Chapman
Journal:  Mol Ther Methods Clin Dev       Date:  2017-03-08       Impact factor: 6.698

9.  The Cryo-EM structure of AAV2 Rep68 in complex with ssDNA reveals a malleable AAA+ machine that can switch between oligomeric states.

Authors:  Vishaka Santosh; Faik N Musayev; Rahul Jaiswal; Francisco Zárate-Pérez; Bram Vandewinkel; Caroline Dierckx; Molly Endicott; Kamyar Sharifi; Kelly Dryden; Els Henckaerts; Carlos R Escalante
Journal:  Nucleic Acids Res       Date:  2020-12-03       Impact factor: 16.971

10.  Comparing Cryo-EM Reconstructions and Validating Atomic Model Fit Using Difference Maps.

Authors:  Agnel Praveen Joseph; Ingvar Lagerstedt; Arjen Jakobi; Tom Burnley; Ardan Patwardhan; Maya Topf; Martyn Winn
Journal:  J Chem Inf Model       Date:  2020-02-11       Impact factor: 4.956

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