Literature DB >> 35562427

Structural biology of CRISPR-Cas immunity and genome editing enzymes.

Joy Y Wang1,2, Patrick Pausch3, Jennifer A Doudna4,5,6,7,8,9,10,11.   

Abstract

CRISPR-Cas systems provide resistance against foreign mobile genetic elements and have a wide range of genome editing and biotechnological applications. In this Review, we examine recent advances in understanding the molecular structures and mechanisms of enzymes comprising bacterial RNA-guided CRISPR-Cas immune systems and deployed for wide-ranging genome editing applications. We explore the adaptive and interference aspects of CRISPR-Cas function as well as open questions about the molecular mechanisms responsible for genome targeting. These structural insights reflect close evolutionary links between CRISPR-Cas systems and mobile genetic elements, including the origins and evolution of CRISPR-Cas systems from DNA transposons, retrotransposons and toxin-antitoxin modules. We discuss how the evolution and structural diversity of CRISPR-Cas systems explain their functional complexity and utility as genome editing tools.
© 2022. Springer Nature Limited.

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Year:  2022        PMID: 35562427     DOI: 10.1038/s41579-022-00739-4

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   78.297


  174 in total

1.  CRISPR provides acquired resistance against viruses in prokaryotes.

Authors:  Rodolphe Barrangou; Christophe Fremaux; Hélène Deveau; Melissa Richards; Patrick Boyaval; Sylvain Moineau; Dennis A Romero; Philippe Horvath
Journal:  Science       Date:  2007-03-23       Impact factor: 47.728

Review 2.  Approaches to study CRISPR RNA biogenesis and the key players involved.

Authors:  Juliane Behler; Wolfgang R Hess
Journal:  Methods       Date:  2019-07-17       Impact factor: 3.608

Review 3.  Molecular mechanisms of CRISPR-Cas spacer acquisition.

Authors:  Jon McGinn; Luciano A Marraffini
Journal:  Nat Rev Microbiol       Date:  2019-01       Impact factor: 60.633

Review 4.  The Biology of CRISPR-Cas: Backward and Forward.

Authors:  Frank Hille; Hagen Richter; Shi Pey Wong; Majda Bratovič; Sarah Ressel; Emmanuelle Charpentier
Journal:  Cell       Date:  2018-03-08       Impact factor: 41.582

5.  Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems.

Authors:  Sergey Shmakov; Omar O Abudayyeh; Kira S Makarova; Yuri I Wolf; Jonathan S Gootenberg; Ekaterina Semenova; Leonid Minakhin; Julia Joung; Silvana Konermann; Konstantin Severinov; Feng Zhang; Eugene V Koonin
Journal:  Mol Cell       Date:  2015-10-22       Impact factor: 17.970

6.  Origins and evolution of CRISPR-Cas systems.

Authors:  Eugene V Koonin; Kira S Makarova
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-05-13       Impact factor: 6.237

Review 7.  Anti-CRISPR protein applications: natural brakes for CRISPR-Cas technologies.

Authors:  Rafael Pinilla-Redondo; Bálint Csörgő; Nicole D Marino; Joseph Bondy-Denomy
Journal:  Nat Methods       Date:  2020-03-16       Impact factor: 28.547

Review 8.  CRISPR-Cas guides the future of genetic engineering.

Authors:  Gavin J Knott; Jennifer A Doudna
Journal:  Science       Date:  2018-08-31       Impact factor: 47.728

9.  The CRISPRdb database and tools to display CRISPRs and to generate dictionaries of spacers and repeats.

Authors:  Ibtissem Grissa; Gilles Vergnaud; Christine Pourcel
Journal:  BMC Bioinformatics       Date:  2007-05-23       Impact factor: 3.169

10.  PAM identification by CRISPR-Cas effector complexes: diversified mechanisms and structures.

Authors:  Daniel Gleditzsch; Patrick Pausch; Hanna Müller-Esparza; Ahsen Özcan; Xiaohan Guo; Gert Bange; Lennart Randau
Journal:  RNA Biol       Date:  2018-09-18       Impact factor: 4.652

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